Literature DB >> 26517592

Long non-coding RNA regulation of reproduction and development.

David H Taylor1, Erin Tsi-Jia Chu2, Roman Spektor1, Paul D Soloway1,2,3.   

Abstract

Noncoding RNAs (ncRNAs) have long been known to play vital roles in eukaryotic gene regulation. Studies conducted over a decade ago revealed that maturation of spliced, polyadenylated coding mRNA occurs by reactions involving small nuclear RNAs and small nucleolar RNAs; mRNA translation depends on activities mediated by transfer RNAs and ribosomal RNAs, subject to negative regulation by micro RNAs; transcriptional competence of sex chromosomes and some imprinted genes is regulated in cis by ncRNAs that vary by species; and both small-interfering RNAs and piwi-interacting RNAs bound to Argonaute-family proteins regulate post-translational modifications on chromatin and local gene expression states. More recently, gene-regulating noncoding RNAs have been identified, such as long intergenic and long noncoding RNAs (collectively referred to as lncRNAs)--a class totaling more than 100,000 transcripts in humans, which include some of the previously mentioned RNAs that regulate dosage compensation and imprinted gene expression. Here, we provide an overview of lncRNA activities, and then review the role of lncRNAs in processes vital to reproduction, such as germ cell specification, sex determination and gonadogenesis, sex hormone responses, meiosis, gametogenesis, placentation, non-genetic inheritance, and pathologies affecting reproductive tissues. Results from many species are presented to illustrate the evolutionarily conserved processes lncRNAs are involved in.
© 2015 Wiley Periodicals, Inc.

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Year:  2015        PMID: 26517592      PMCID: PMC4762656          DOI: 10.1002/mrd.22581

Source DB:  PubMed          Journal:  Mol Reprod Dev        ISSN: 1040-452X            Impact factor:   2.609


  270 in total

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Review 2.  Apomixis: a developmental perspective.

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3.  Oogenesis in Hydra: nurse cells transfer cytoplasm directly to the growing oocyte.

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Journal:  Dev Biol       Date:  2005-05-01       Impact factor: 3.582

4.  m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells.

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Journal:  Cell Stem Cell       Date:  2014-10-16       Impact factor: 24.633

5.  HELLP babies link a novel lincRNA to the trophoblast cell cycle.

Authors:  Marie van Dijk; Hari K Thulluru; Joyce Mulders; Omar J Michel; Ankie Poutsma; Sandra Windhorst; Gunilla Kleiverda; Daoud Sie; Augusta M A Lachmeijer; Cees B M Oudejans
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Review 6.  X-inactivation, imprinting, and long noncoding RNAs in health and disease.

Authors:  Jeannie T Lee; Marisa S Bartolomei
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

7.  The gametic synapse: RNA transfer to the bovine oocyte.

Authors:  Angus D Macaulay; Isabelle Gilbert; Julieta Caballero; Rodrigo Barreto; Eric Fournier; Prudencio Tossou; Marc-André Sirard; Hugh J Clarke; Édouard W Khandjian; Francois J Richard; Poul Hyttel; Claude Robert
Journal:  Biol Reprod       Date:  2014-08-20       Impact factor: 4.285

Review 8.  lincRNAs: genomics, evolution, and mechanisms.

Authors:  Igor Ulitsky; David P Bartel
Journal:  Cell       Date:  2013-07-03       Impact factor: 41.582

9.  An update on LNCipedia: a database for annotated human lncRNA sequences.

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Journal:  Nucleic Acids Res       Date:  2014-11-05       Impact factor: 16.971

10.  PRC2 binds active promoters and contacts nascent RNAs in embryonic stem cells.

Authors:  Syuzo Kaneko; Jinsook Son; Steven S Shen; Danny Reinberg; Roberto Bonasio
Journal:  Nat Struct Mol Biol       Date:  2013-10-20       Impact factor: 15.369

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  55 in total

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Journal:  Tumour Biol       Date:  2016-01-11

2.  Integrated Analysis of mRNAs and Long Non-Coding RNAs Expression of Oviduct That Provides Novel Insights into the Prolificacy Mechanism of Goat (Capra hircus).

Authors:  Zhipeng Sun; Zijun Zhang; Yufang Liu; Chunhuan Ren; Xiaoyun He; Yanting Jiang; Yina Ouyang; Qionghua Hong; Mingxing Chu
Journal:  Genes (Basel)       Date:  2022-06-08       Impact factor: 4.141

3.  Identification, characterization and functional analysis of gonadal long noncoding RNAs in a protogynous hermaphroditic teleost fish, the ricefield eel (Monopterus albus).

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Journal:  BMC Genomics       Date:  2022-06-20       Impact factor: 4.547

4.  [Knockdown of long non-coding RNA MIR4697 host gene inhibits adipogenic differentiation in bone marrow mesenchymal stem cells].

Authors:  T Shuai; J Liu; Y Y Guo; C Y Jin
Journal:  Beijing Da Xue Xue Bao Yi Xue Ban       Date:  2022-04-18

5.  Genome-Wide Analysis and Function Prediction of Long Noncoding RNAs in Sheep Pituitary Gland Associated with Sexual Maturation.

Authors:  Hua Yang; Jianyu Ma; Zhibo Wang; Xiaolei Yao; Jie Zhao; Xinyue Zhao; Feng Wang; Yanli Zhang
Journal:  Genes (Basel)       Date:  2020-03-17       Impact factor: 4.096

6.  Systematic analysis of long intergenic non-coding RNAs in C. elegans germline uncovers roles in somatic growth.

Authors:  Hasan Ishtayeh; Hanna Achache; Eitan Kroizer; Yisrael Rappaport; Eyal Itskovits; Hila Gingold; Corinne Best; Oded Rechavi; Yonatan B Tzur
Journal:  RNA Biol       Date:  2020-09-05       Impact factor: 4.652

7.  Sexually Dimorphic Expression of eGFP Transgene in the Akr1A1 Locus of Mouse Liver Regulated by Sex Hormone-Related Epigenetic Remodeling.

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Journal:  Sci Rep       Date:  2016-04-18       Impact factor: 4.379

8.  Integrated lncRNA and mRNA Transcriptome Analyses in the Ovary of Cynoglossus semilaevis Reveal Genes and Pathways Potentially Involved in Reproduction.

Authors:  Yani Dong; Likang Lyu; Daiqiang Zhang; Jing Li; Haishen Wen; Bao Shi
Journal:  Front Genet       Date:  2021-05-19       Impact factor: 4.599

9.  Oocyte related factors impacting on embryo quality: relevance for in vitro embryo production.

Authors:  Fabienne Nuttinck
Journal:  Anim Reprod       Date:  2018-08-17       Impact factor: 1.807

10.  BC200 LncRNA a potential predictive marker of poor prognosis in esophageal squamous cell carcinoma patients.

Authors:  Rui-Hua Zhao; Cai-Hua Zhu; Xiang-Ke Li; Wei Cao; Hong Zong; Xin-Guang Cao; Hai-Yan Hu
Journal:  Onco Targets Ther       Date:  2016-04-15       Impact factor: 4.147

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