Literature DB >> 26510568

Genetic diversity in humans and non-human primates and its evolutionary consequences.

Naoki Osada1.   

Abstract

Genetic diversity is a key parameter in population genetics and is important for understanding the process of evolution and for the development of appropriate conservation strategies. Recent advances in sequencing technology have enabled the measurement of genetic diversity of various organisms at the nucleotide level and on a genome-wide scale, yielding more precise estimates than were previously achievable. In this review, I have compiled and summarized the estimates of genetic diversity in humans and non-human primates based on recent genome-wide studies. Although studies on population genetics demonstrated fluctuations in population sizes over time, general patterns have emerged. As shown previously, genetic diversity in humans is one of the lowest among primates; however, certain other primate species exhibit genetic diversity that is comparable to or even lower than that in humans. There exists greater than 10-fold variation in genetic diversity among primate species, and I found weak correlation with species fecundity but not with body or propagule size. I further discuss the potential evolutionary consequences of population size decline on the evolution of primate species. The level of genetic diversity negatively correlates with the ratio of non-synonymous to synonymous polymorphisms in a population, suggesting that proportionally greater numbers of slightly deleterious mutations segregate in small rather than large populations. Although population size decline is likely to promote the fixation of slightly deleterious mutations, there are molecular mechanisms, such as compensatory mutations at various molecular levels, which may prevent fitness decline at the population level. The effects of slightly deleterious mutations from theoretical and empirical studies and their relevance to conservation biology are also discussed in this review.

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Year:  2015        PMID: 26510568     DOI: 10.1266/ggs.90.133

Source DB:  PubMed          Journal:  Genes Genet Syst        ISSN: 1341-7568            Impact factor:   1.517


  9 in total

1.  Sheltering of deleterious mutations explains the stepwise extension of recombination suppression on sex chromosomes and other supergenes.

Authors:  Paul Jay; Emilie Tezenas; Amandine Véber; Tatiana Giraud
Journal:  PLoS Biol       Date:  2022-07-19       Impact factor: 9.593

2.  Major Histocompatibility Complex (MHC) Diversity of the Reintroduction Populations of Endangered Przewalski's Horse.

Authors:  Yongqing Tang; Gang Liu; Shasha Zhao; Kai Li; Dong Zhang; Shuqiang Liu; Defu Hu
Journal:  Genes (Basel)       Date:  2022-05-23       Impact factor: 4.141

3.  Structure and Diversity of the Rhesus Macaque Immunoglobulin Loci through Multiple De Novo Genome Assemblies.

Authors:  Akshaya Ramesh; Sam Darko; Axin Hua; Glenn Overman; Amy Ransier; Joseph R Francica; Ashley Trama; Georgia D Tomaras; Barton F Haynes; Daniel C Douek; Thomas B Kepler
Journal:  Front Immunol       Date:  2017-10-27       Impact factor: 8.786

4.  Evaluation of Macaca radiata as a non-human primate model of Dengue virus infection.

Authors:  Fumihiro Kato; Yuki Ishida; Akihiko Kawakami; Tomohiko Takasaki; Masayuki Saijo; Tomoyuki Miura; Takayuki Hishiki
Journal:  Sci Rep       Date:  2018-02-21       Impact factor: 4.379

5.  Whole genome sequencing in the search for genes associated with the control of SIV infection in the Mauritian macaque model.

Authors:  Marc de Manuel; Takashi Shiina; Shingo Suzuki; Nathalie Dereuddre-Bosquet; Henri-Jean Garchon; Masayuki Tanaka; Nicolas Congy-Jolivet; Alice Aarnink; Roger Le Grand; Tomas Marques-Bonet; Antoine Blancher
Journal:  Sci Rep       Date:  2018-05-08       Impact factor: 4.379

6.  Cynomolgus macaque IL37 polymorphism and control of SIV infection.

Authors:  Takashi Shiina; Shingo Suzuki; Nicolas Congy-Jolivet; Alice Aarnink; Henri-Jean Garchon; Nathalie Dereuddre-Bosquet; Bruno Vaslin; Nicolas Tchitchek; Delphine Desjardins; Brigitte Autran; Olivier Lambotte; Ioannis Theodorou; Roger Le Grand; Antoine Blancher
Journal:  Sci Rep       Date:  2019-05-28       Impact factor: 4.379

7.  Novel Classes and Evolutionary Turnover of Histone H2B Variants in the Mammalian Germline.

Authors:  Pravrutha Raman; Mary C Rominger; Janet M Young; Antoine Molaro; Toshio Tsukiyama; Harmit S Malik
Journal:  Mol Biol Evol       Date:  2022-02-03       Impact factor: 16.240

8.  Medaka Population Genome Structure and Demographic History Described via Genotyping-by-Sequencing.

Authors:  Takafumi Katsumura; Shoji Oda; Hiroshi Mitani; Hiroki Oota
Journal:  G3 (Bethesda)       Date:  2019-01-09       Impact factor: 3.154

Review 9.  Improving immunological insights into the ferret model of human viral infectious disease.

Authors:  Julius Wong; Daniel Layton; Adam K Wheatley; Stephen J Kent
Journal:  Influenza Other Respir Viruses       Date:  2019-10-03       Impact factor: 4.380

  9 in total

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