Literature DB >> 26508027

Genetic landscape of recurrent ASXL1, U2AF1, SF3B1, SRSF2, and EZH2 mutations in 304 Chinese patients with myelodysplastic syndromes.

Lingyun Wu1, Luxi Song1, Lan Xu2, Chunkang Chang1, Feng Xu1, Dong Wu1, Qi He1, Jiying Su1, Liyu Zhou1, Chao Xiao1, Zheng Zhang1, Youshan Zhao1, Saijuan Chen2, Xiao Li3.   

Abstract

We determined the biological and prognostic significance of five recurrent genetic aberrations in Chinese patients with myelodysplastic syndromes (MDS). A total of 304 Chinese MDS patients were screened for known mutations in five genes (ASXL1, U2AF1, SF3B1, SRSF2, and EZH2) using next-generation sequencing. Of these, 97 patients (31.9 %) harbored at least one mutation in the five genes, and patients harboring these mutations had distinct clinical features. Incidence ratios for mutations in ASXL1, U2AF1, SF3B1, SRSF2, and EZH2 were 11.8, 8.6, 8.2, 4.3, and 3.6 %, respectively. Patients with U2AF1, SRSF2, and EZH2 mutations more commonly had high-risk than low-risk subtypes, while SF3B1 mutations were frequently confirmed in MDS subtypes with increased ring sideroblasts. Cases with ASXL1 mutations had a higher percentage of complex karyotypes, while U2AF1 mutations were more common in patients with trisomy 8 or 20q deletions. Notably, among 124 patients with a normal karyotype, 48 (38.7 %) had at least one mutation. Patients with U2AF1 or SRSF2 mutations had significantly shorter overall survival (OS) times compared with patients without these mutations (U2AF1 mutations: median OS, 18 vs 54 months, p = 0.032; SRSF2 mutations: median OS 11 vs 54 months, p = 0.005, respectively). Multivariate analysis showed that the presence of SRSF2 mutations was an independent unfavorable prognostic factor for OS (hazard ratio 2.039; 95 % confidence interval 1.040-4.000; p = 0.038). These data suggest that mutations in epigenetic modification and splicesome genes are common in Chinese patients with MDS, while mutations in U2AF1 and SRSF2 appear to predict an unfavorable prognosis.

Entities:  

Keywords:  Molecular markers; Myelodysplastic syndromes; Next-generation sequencing; Prognosis

Mesh:

Substances:

Year:  2015        PMID: 26508027     DOI: 10.1007/s13277-015-4305-2

Source DB:  PubMed          Journal:  Tumour Biol        ISSN: 1010-4283


  29 in total

1.  SF3B1 mutations in myelodysplastic syndromes: clinical associations and prognostic implications.

Authors:  F Damm; F Thol; O Kosmider; S Kade; P Löffeld; F Dreyfus; A Stamatoullas-Bastard; A Tanguy-Schmidt; O Beyne-Rauzy; S de Botton; A Guerci-Bresler; G Göhring; B Schlegelberger; A Ganser; O A Bernard; M Fontenay; M Heuser
Journal:  Leukemia       Date:  2011-11-08       Impact factor: 11.528

Review 2.  Somatic mutations and epigenetic abnormalities in myelodysplastic syndromes.

Authors:  Raphael Itzykson; Olivier Kosmider; Pierre Fenaux
Journal:  Best Pract Res Clin Haematol       Date:  2014-01-13       Impact factor: 3.020

3.  Prognostic significance of ASXL1 mutations in patients with myelodysplastic syndromes.

Authors:  Felicitas Thol; Inna Friesen; Frederik Damm; Haiyang Yun; Eva M Weissinger; Jürgen Krauter; Katharina Wagner; Anuhar Chaturvedi; Amit Sharma; Martin Wichmann; Gudrun Göhring; Christiane Schumann; Gesine Bug; Oliver Ottmann; Wolf-Karsten Hofmann; Brigitte Schlegelberger; Michael Heuser; Arnold Ganser
Journal:  J Clin Oncol       Date:  2011-05-16       Impact factor: 44.544

4.  Somatic mutations of the histone methyltransferase gene EZH2 in myelodysplastic syndromes.

Authors:  Gorica Nikoloski; Saskia M C Langemeijer; Roland P Kuiper; Ruth Knops; Marion Massop; Evelyn R L T M Tönnissen; Adrian van der Heijden; Theresia N Scheele; Peter Vandenberghe; Theo de Witte; Bert A van der Reijden; Joop H Jansen
Journal:  Nat Genet       Date:  2010-07-04       Impact factor: 38.330

5.  TET2, ASXL1 and EZH2 mutations in Chinese with myelodysplastic syndromes.

Authors:  Jieyu Wang; Xiaofei Ai; Robert Peter Gale; Zefeng Xu; Tiejun Qin; Liwei Fang; Hongli Zhang; Lijuan Pan; Naibo Hu; Yue Zhang; Zhijian Xiao
Journal:  Leuk Res       Date:  2012-10-23       Impact factor: 3.156

Review 6.  The 2008 revision of the World Health Organization (WHO) classification of myeloid neoplasms and acute leukemia: rationale and important changes.

Authors:  James W Vardiman; Jüergen Thiele; Daniel A Arber; Richard D Brunning; Michael J Borowitz; Anna Porwit; Nancy Lee Harris; Michelle M Le Beau; Eva Hellström-Lindberg; Ayalew Tefferi; Clara D Bloomfield
Journal:  Blood       Date:  2009-04-08       Impact factor: 22.113

7.  Mutations of polycomb-associated gene ASXL1 in myelodysplastic syndromes and chronic myelomonocytic leukaemia.

Authors:  Véronique Gelsi-Boyer; Virginie Trouplin; José Adélaïde; Julien Bonansea; Nathalie Cervera; Nadine Carbuccia; Arnaud Lagarde; Thomas Prebet; Meyer Nezri; Danielle Sainty; Sylviane Olschwang; Luc Xerri; Max Chaffanet; Marie-Joëlle Mozziconacci; Norbert Vey; Daniel Birnbaum
Journal:  Br J Haematol       Date:  2009-04-15       Impact factor: 6.998

8.  Investigation of 305 patients with myelodysplastic syndromes and 20q deletion for associated cytogenetic and molecular genetic lesions and their prognostic impact.

Authors:  Ulrike Bacher; Torsten Haferlach; Susanne Schnittger; Melanie Zenger; Manja Meggendorfer; Sabine Jeromin; Andreas Roller; Vera Grossmann; Maria-Theresa Krauth; Tamara Alpermann; Wolfgang Kern; Claudia Haferlach
Journal:  Br J Haematol       Date:  2013-12-26       Impact factor: 6.998

Review 9.  Mutations in ASXL1 are associated with poor prognosis across the spectrum of malignant myeloid diseases.

Authors:  Véronique Gelsi-Boyer; Mandy Brecqueville; Raynier Devillier; Anne Murati; Marie-Joelle Mozziconacci; Daniel Birnbaum
Journal:  J Hematol Oncol       Date:  2012-03-21       Impact factor: 17.388

Review 10.  Functional and cancer genomics of ASXL family members.

Authors:  M Katoh
Journal:  Br J Cancer       Date:  2013-06-04       Impact factor: 7.640

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  16 in total

Review 1.  Splicing factor gene mutations in hematologic malignancies.

Authors:  Borja Saez; Matthew J Walter; Timothy A Graubert
Journal:  Blood       Date:  2016-12-09       Impact factor: 22.113

Review 2.  Splicing factor SRSF2-centric gene regulation.

Authors:  Kun Li; Ziqiang Wang
Journal:  Int J Biol Sci       Date:  2021-04-16       Impact factor: 6.580

Review 3.  Genetics and Epigenetics of Myelodysplastic Syndromes and Response to Drug Therapy: New Insights.

Authors:  Saeid Shahrabi; Abbas Khosravi; Mohammad Shahjahani; Fakher Rahim; Najmaldin Saki
Journal:  Oncol Rev       Date:  2016-12-14

4.  Prognostic value of SRSF2 mutations in patients with de novo myelodysplastic syndromes: A meta-analysis.

Authors:  Xue Zheng; Zhi Zhan; Duolan Naren; Jing Li; Tianyou Yan; Yuping Gong
Journal:  PLoS One       Date:  2017-09-27       Impact factor: 3.240

5.  Exploration of the role of gene mutations in myelodysplastic syndromes through a sequencing design involving a small number of target genes.

Authors:  Feng Xu; Ling-Yun Wu; Qi He; Dong Wu; Zheng Zhang; Lu-Xi Song; You-Shan Zhao; Ji-Ying Su; Li-Yu Zhou; Juan Guo; Chun-Kang Chang; Xiao Li
Journal:  Sci Rep       Date:  2017-02-21       Impact factor: 4.379

6.  [Mutational analysis of RNA splicing machinery genes SF3B1, U2AF1 and SRSF2 in 118 patients with myelodysplastic syndromes and related diseases].

Authors:  J Y Wang; J Ma; Y N Lin; J Wang; H Shen; F M Gui; C Han; Q H Li; Z Song; X J Wang
Journal:  Zhonghua Xue Ye Xue Za Zhi       Date:  2017-03-14

7.  Effect of RNA splicing machinery gene mutations on prognosis of patients with MDS: A meta-analysis.

Authors:  Xiaoxue Wang; Xiaomeng Song; Xiaojing Yan
Journal:  Medicine (Baltimore)       Date:  2019-05       Impact factor: 1.817

8.  Genetic alterations in 47 patients with a novel myelodysplastic syndrome diagnosis at a single center.

Authors:  Pan Zhao; Jiayue Qin; Weiyi Liu; Richeng Quan; Haiyan Xiao; Chi Liu; Liu Li; Yan Lv; Qianze Zhu; Hongzhi Wang; Xiaoqing Guo; Juan Wang; Xiaomei Hu
Journal:  Oncol Lett       Date:  2019-09-12       Impact factor: 2.967

9.  The U2AF1S34F mutation induces lineage-specific splicing alterations in myelodysplastic syndromes.

Authors:  Bon Ham Yip; Violetta Steeples; Emmanouela Repapi; Richard N Armstrong; Miriam Llorian; Swagata Roy; Jacqueline Shaw; Hamid Dolatshad; Stephen Taylor; Amit Verma; Matthias Bartenstein; Paresh Vyas; Nicholas Cp Cross; Luca Malcovati; Mario Cazzola; Eva Hellström-Lindberg; Seishi Ogawa; Christopher Wj Smith; Andrea Pellagatti; Jacqueline Boultwood
Journal:  J Clin Invest       Date:  2017-04-24       Impact factor: 14.808

10.  [High throughput sequencing combined with DNA-PCR for detection of 51 kinds of hematologic malignancy related gene mutations in patients with myelodysplastic syndromes].

Authors:  K Wang; H Y Chao; P Wu; C He; R Zhang; H J Shen; S N Chen
Journal:  Zhonghua Xue Ye Xue Za Zhi       Date:  2018-05-14
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