| Literature DB >> 26501248 |
C S Chidan Kumar1,2, Huey Chong Kwong3, Siau Hui Mah4, Tze Shyang Chia5, Wan-Sin Loh6, Ching Kheng Quah7, Gin Keat Lim8, Siddegowda Chandraju9, Hoong-Kun Fun10,11.
Abstract
Adamantyl-based compounds are commercially important in the treatments for neurological conditions and type-2 diabetes, aside from their anti-viral abilities. Their values in drug design are chronicled as multi-dimensional. In the present study, a series of 2-(adamantan-1-yl)-2-oxoethyl benzoates, 2(a-q), and 2-(adamantan-1-yl)-2-oxoethyl 2-pyridinecarboxylate, 2r, were synthesized by reacting 1-adamantyl bromomethyl ketone with various carboxylic acids using potassium carbonate in dimethylformamide medium at room temperature. Three-dimensional structures studied using X-ray diffraction suggest that the adamantyl moiety can serve as an efficient building block to synthesize 2-oxopropyl benzoate derivatives with synclinal conformation with a looser-packed crystal packing system. Compounds 2a, 2b, 2f, 2g, 2i, 2j, 2m, 2n, 2o, 2q and 2r exhibit strong antioxidant activities in the hydrogen peroxide radical scavenging test. Furthermore, three compounds, 2p, 2q and 2r, show good anti-inflammatory activities in the evaluation of albumin denaturation.Entities:
Keywords: adamantyl; anti-inflammatory; antioxidant; crystal packing; synclinal
Mesh:
Substances:
Year: 2015 PMID: 26501248 PMCID: PMC6331964 DOI: 10.3390/molecules201018827
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1Reaction scheme for 2(a–r).
Refined site occupancy ratio for disordered compounds.
| Compound | Refined Site Occupancy Ratio |
|---|---|
| 0.390 (10):0.610 (10) ( | |
| 0.695 (4):0.305(4) ( | |
| 0.431 (10):0.569 (10) ( | |
| 0.716 (6):0.284 (6) ( | |
| 0.793 (4):0.207 (4) ( | |
| 0.753 (3):0.247 (3) | |
| 0.873 (4):0.127 (4) ( | |
| 0.897 (4):0.103 (4) |
Figure 1General chemical scheme for all compounds, showing τ1, τ2 and τ3 as torsion angles.
Summary of the C11—C12—O1—C13 and O1—C13—C14—C15 torsion angles.
| Compound | Substituent | Torsion Angles C11—C12—O1—C13, τ2 | Torsion Angles O1—C13—C14—C15, τ3 |
|---|---|---|---|
| Benzene | −81.31, 75.84 | −9.95, 2.84 | |
| 2-Chlorobenzene | 78.96, 75.23 | 11.55, −3.78 | |
| 3-Chlorobenzene | 73.10 | 3.22 | |
| 4-Chlorobenzene | 73.75 | −179.57 | |
| 2,4-Dichlorobenzene | −69.7, −85.50 | 138.13, 135.26 | |
| 2-Methylbenzene | −76.09, 77.77 | −9.58, 6.64 | |
| 3-Methylbenzene | −72.91 | 1.25 | |
| 4-Methylbenzene | 75.42 | −170.83 | |
| 2-Methoxybenzene | −86.12, −79.34 | 39.08, 156.87 | |
| 3-Methoxybenzene | −75.05 | −173.58 | |
| 4-Methoxybenzene | −76.60 | 168.36 | |
| 2-Nitrobenzene | −70.96, −70.23 | 126.4, 130.00 | |
| 4-Nitrobenzene | 73.57 | −1.86 | |
| 2-Aminobenzene | −76.5 | 171.92 | |
| 3-Aminobenzene | 77.13 | −17.86 | |
| 2-Pyridine | −75.07 | −17.79, 22.32 |
List of the structural occupancy of the present and reported compounds i.
| Compound | Packing Coefficient (%) | Compound | Packing Coefficient (%) | Compound | Packing Coefficient (%) |
|---|---|---|---|---|---|
| 61.11 | 63.94 | 64.40 | |||
| 61.32 | 64.33 | 61.06 | |||
| 62.33 | 62.08 | 67.22 | |||
| 62.53 | 63.98 | 63.92 | |||
| 60.79 | 67.27 | 66.98 | |||
| 60.97 | 65.07 | 68.55 | |||
| 61.68 | 68.83 | 64.37 | |||
| 61.02 | 62.96 | 60.66 | |||
| 61.58 | 62.38 | 63.77 | |||
| 61.08 | 64.89 | 62.53 | |||
| 61.07 | 68.00 | 66.04 | |||
| 61.85 | 65.64 | 63.97 | |||
| 63.05 | 64.03 | 66.25 | |||
| 61.24 | 63.03 | 68.65 | |||
| 61.81 | 63.25 | 63.55 | |||
| 60.61 | 63.22 | 63.37 | |||
| 63.85 | 63.04 | ||||
| 64.07 | 65.80 |
i Each reported compound is represented by the Cambridge Crystallographic Data Centre (CCDC) reference code, and its systematic name is provided in the Supplementary Materials.
Figure 2Structural occupancy comparison of the present and reported compounds.
Figure 3Crystal packing comparison of Compounds 2a and 2f.
Figure 4Crystal packing comparison of Compounds 2c and 2g.
Figure 5Crystal packing comparison of Compounds 2h and 2k.
Figure 6Crystal packing comparison of Compounds 2d and 2n.
Figure 7Crystal packing relationship in some studied compounds. Red boxes and yellow arrows indicate 3D and 2D similarities, respectively.
Figure 8Hydrogen peroxide radical scavenging. The data represent the percentage of hydrogen peroxide radical inhibition (mean ± SD), and experiments were performed in triplicate.
Figure 9Inhibition of protein denaturation. The data represent the percentage of hydrogen peroxide radical inhibition (mean ± SD), and experiments were performed in triplicate.