Literature DB >> 26500693

Towards automatic image analysis and assessment of the multicellular apoptosis process.

Riccardo Ziraldo1, Nichole Link2, John Abrams3, Lan Ma1.   

Abstract

Apoptotic programmed cell death (PCD) is a fundamental aspect of developmental maturation. However, the authors' understanding of apoptosis, especially in the multi-cell regime, is incomplete because of the difficulty of identifying dying cells by conventional strategies. Real-time in vivo microscopy of Drosophila, an excellent model system for studying the PCD during development, has been used to uncover plausible collective apoptosis at the tissue level, although the dynamic regulation of the process remains to be deciphered. In this work, the authors have developed an image-analysis program that can quantitatively analyse time-lapse microscopy of live tissues undergoing apoptosis with a fluorescent nuclear marker, and subsequently extract the spatiotemporal patterns of multicellular response. The program can process a large number of cells (>103) automatically tracked across sets of image frames. It is applied to characterise the apoptosis of Drosophila wing epithelium at eclosion. Using the natural anatomic structures as reference, the authors identify dynamic patterns in the progression of PCD within the Drosophila tissues. The results not only confirm the previously observed collective multi-cell behaviour from a quantitative perspective, but also reveal a plausible role played by the anatomic structures, such as the wing veins, in the PCD propagation across the Drosophila wing.

Entities:  

Year:  2015        PMID: 26500693      PMCID: PMC4613781          DOI: 10.1049/iet-ipr.2014.0531

Source DB:  PubMed          Journal:  IET Image Process        ISSN: 1751-9659            Impact factor:   2.373


  33 in total

1.  A pyramid approach to subpixel registration based on intensity.

Authors:  P Thévenaz; U E Ruttimann; M Unser
Journal:  IEEE Trans Image Process       Date:  1998       Impact factor: 10.856

2.  Quantitative analysis of pathways controlling extrinsic apoptosis in single cells.

Authors:  John G Albeck; John M Burke; Bree B Aldridge; Mingsheng Zhang; Douglas A Lauffenburger; Peter K Sorger
Journal:  Mol Cell       Date:  2008-04-11       Impact factor: 17.970

Review 3.  Active participation of cell death in development and organismal homeostasis.

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Review 4.  Measuring and modeling apoptosis in single cells.

Authors:  Sabrina L Spencer; Peter K Sorger
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Review 5.  Apoptosis and beyond: cytometry in studies of programmed cell death.

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Journal:  Methods Cell Biol       Date:  2011       Impact factor: 1.441

6.  Segmentation of fluorescence microscopy cell images using unsupervised mining.

Authors:  Xian Du; Sumeet Dua
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7.  Activation of the cAMP/PKA signaling pathway is required for post-ecdysial cell death in wing epidermal cells of Drosophila melanogaster.

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Journal:  Development       Date:  2004-03-03       Impact factor: 6.868

8.  A flexible and robust approach for segmenting cell nuclei from 2D microscopy images using supervised learning and template matching.

Authors:  Cheng Chen; Wei Wang; John A Ozolek; Gustavo K Rohde
Journal:  Cytometry A       Date:  2013-04-08       Impact factor: 4.355

9.  Activation of the c-Jun N-terminal kinase pathway by MST1 is essential and sufficient for the induction of chromatin condensation during apoptosis.

Authors:  Seiji Ura; Hiroshi Nishina; Yukiko Gotoh; Toshiaki Katada
Journal:  Mol Cell Biol       Date:  2007-06-04       Impact factor: 4.272

10.  Nuclear morphometric analysis (NMA): screening of senescence, apoptosis and nuclear irregularities.

Authors:  Eduardo C Filippi-Chiela; Manuel M Oliveira; Bruno Jurkovski; Sidia Maria Callegari-Jacques; Vinicius Duval da Silva; Guido Lenz
Journal:  PLoS One       Date:  2012-08-08       Impact factor: 3.240

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  2 in total

1.  Apoptosis detection via automated algorithms to analyze biomarker translocation in reporter cells.

Authors:  A H Rezwanuddin Ahmed; Zeynep Dereli-Korkut; Joanne Haeun Lee; Sidra Piracha; M Lane Gilchrist; Xuejun Jiang; Sihong Wang
Journal:  Biotechnol Bioeng       Date:  2020-02-03       Impact factor: 4.530

2.  Combination Therapy with Sulfasalazine and Valproic Acid Promotes Human Glioblastoma Cell Death Through Imbalance of the Intracellular Oxidative Response.

Authors:  Carlos Gustavo Garcia; Suzana Assad Kahn; Luiz Henrique Medeiros Geraldo; Igor Romano; Ivan Domith; Deborah Christinne Lima E Silva; Fernando Dos Santos Assunção; Marcos José Ferreira; Camila Cabral Portugal; Jorge Marcondes de Souza; Luciana Ferreira Romão; Annibal Duarte Pereira Netto; Flávia Regina Souza Lima; Marcelo Cossenza
Journal:  Mol Neurobiol       Date:  2018-01-19       Impact factor: 5.590

  2 in total

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