Literature DB >> 26494755

Transcriptional control of tissue formation throughout root development.

Miguel A Moreno-Risueno1, Rosangela Sozzani2, Galip Gürkan Yardımcı2, Jalean J Petricka2, Teva Vernoux3, Ikram Blilou4, Jose Alonso5, Cara M Winter2, Uwe Ohler6, Ben Scheres4, Philip N Benfey7.   

Abstract

Tissue patterns are dynamically maintained. Continuous formation of plant tissues during postembryonic growth requires asymmetric divisions and the specification of cell lineages. We show that the BIRDs and SCARECROW regulate lineage identity, positional signals, patterning, and formative divisions throughout Arabidopsis root growth. These transcription factors are postembryonic determinants of the ground tissue stem cells and their lineage. Upon further activation by the positional signal SHORT-ROOT (a mobile transcription factor), they direct asymmetric cell divisions and patterning of cell types. The BIRDs and SCARECROW with SHORT-ROOT organize tissue patterns at all formative steps during growth, ensuring developmental plasticity.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID: 26494755      PMCID: PMC4855878          DOI: 10.1126/science.aad1171

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  14 in total

1.  SCHIZORIZA encodes a nuclear factor regulating asymmetry of stem cell divisions in the Arabidopsis root.

Authors:  Colette A ten Hove; Viola Willemsen; Wouter J de Vries; Anja van Dijken; Ben Scheres; Renze Heidstra
Journal:  Curr Biol       Date:  2010-02-18       Impact factor: 10.834

2.  A high-resolution root spatiotemporal map reveals dominant expression patterns.

Authors:  Siobhan M Brady; David A Orlando; Ji-Young Lee; Jean Y Wang; Jeremy Koch; José R Dinneny; Daniel Mace; Uwe Ohler; Philip N Benfey
Journal:  Science       Date:  2007-11-02       Impact factor: 47.728

3.  An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants.

Authors:  Hongchang Cui; Mitchell P Levesque; Teva Vernoux; Jee W Jung; Alice J Paquette; Kimberly L Gallagher; Jean Y Wang; Ikram Blilou; Ben Scheres; Philip N Benfey
Journal:  Science       Date:  2007-04-20       Impact factor: 47.728

4.  Arabidopsis JACKDAW and MAGPIE zinc finger proteins delimit asymmetric cell division and stabilize tissue boundaries by restricting SHORT-ROOT action.

Authors:  David Welch; Hala Hassan; Ikram Blilou; Richard Immink; Renze Heidstra; Ben Scheres
Journal:  Genes Dev       Date:  2007-09-01       Impact factor: 11.361

5.  The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling.

Authors:  Y Helariutta; H Fukaki; J Wysocka-Diller; K Nakajima; J Jung; G Sena; M T Hauser; P N Benfey
Journal:  Cell       Date:  2000-05-26       Impact factor: 41.582

6.  SCHIZORIZA controls tissue system complexity in plants.

Authors:  Monica Pernas; Eoin Ryan; Liam Dolan
Journal:  Curr Biol       Date:  2010-04-22       Impact factor: 10.834

7.  The PLETHORA genes mediate patterning of the Arabidopsis root stem cell niche.

Authors:  Mitsuhiro Aida; Dimitris Beis; Renze Heidstra; Viola Willemsen; Ikram Blilou; Carla Galinha; Laurent Nussaume; Yoo-Sun Noh; Richard Amasino; Ben Scheres
Journal:  Cell       Date:  2004-10-01       Impact factor: 41.582

8.  The NAC domain transcription factors FEZ and SOMBRERO control the orientation of cell division plane in Arabidopsis root stem cells.

Authors:  Viola Willemsen; Marion Bauch; Tom Bennett; Ana Campilho; Harald Wolkenfelt; Jian Xu; Jim Haseloff; Ben Scheres
Journal:  Dev Cell       Date:  2008-12       Impact factor: 12.270

Review 9.  Symmetry breaking in plants: molecular mechanisms regulating asymmetric cell divisions in Arabidopsis.

Authors:  Jalean J Petricka; Jaimie M Van Norman; Philip N Benfey
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-11       Impact factor: 10.005

10.  Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis.

Authors:  Mitchell P Levesque; Teva Vernoux; Wolfgang Busch; Hongchang Cui; Jean Y Wang; Ikram Blilou; Hala Hassan; Keiji Nakajima; Noritaka Matsumoto; Jan U Lohmann; Ben Scheres; Philip N Benfey
Journal:  PLoS Biol       Date:  2006-05-02       Impact factor: 8.029

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  41 in total

1.  Auxin response cell-autonomously controls ground tissue initiation in the early Arabidopsis embryo.

Authors:  Barbara K Möller; Colette A Ten Hove; Daoquan Xiang; Nerys Williams; Lorena González López; Saiko Yoshida; Margot Smit; Raju Datla; Dolf Weijers
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-06       Impact factor: 11.205

Review 2.  Phosphorylation regulates the activity of INDETERMINATE-DOMAIN (IDD/BIRD) proteins in response to diverse environmental conditions.

Authors:  Ronny Völz; Naganand Rayapuram; Heribert Hirt
Journal:  Plant Signal Behav       Date:  2019-07-17

3.  In vivo FRET-FLIM reveals cell-type-specific protein interactions in Arabidopsis roots.

Authors:  Yuchen Long; Yvonne Stahl; Stefanie Weidtkamp-Peters; Marten Postma; Wenkun Zhou; Joachim Goedhart; María-Isabel Sánchez-Pérez; Theodorus W J Gadella; Rüdiger Simon; Ben Scheres; Ikram Blilou
Journal:  Nature       Date:  2017-07-26       Impact factor: 49.962

Review 4.  Regulation of Division and Differentiation of Plant Stem Cells.

Authors:  Edith Pierre-Jerome; Colleen Drapek; Philip N Benfey
Journal:  Annu Rev Cell Dev Biol       Date:  2018-08-22       Impact factor: 13.827

5.  Histone Deacetylase HDA19 Affects Root Cortical Cell Fate by Interacting with SCARECROW.

Authors:  Wen-Qian Chen; Colleen Drapek; Dong-Xu Li; Zhi-Hong Xu; Philip N Benfey; Shu-Nong Bai
Journal:  Plant Physiol       Date:  2019-02-08       Impact factor: 8.340

6.  Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD.

Authors:  Yoshinori Hirano; Masahiro Nakagawa; Tomoe Suyama; Kohji Murase; Maya Shirakawa; Seiji Takayama; Tai-Ping Sun; Toshio Hakoshima
Journal:  Nat Plants       Date:  2017-02-17       Impact factor: 15.793

7.  Step by step evolution of Indeterminate Domain (IDD) transcriptional regulators: from algae to angiosperms.

Authors:  Santiago Prochetto; Renata Reinheimer
Journal:  Ann Bot       Date:  2020-06-19       Impact factor: 4.357

8.  Changes in chromatin accessibility between Arabidopsis stem cells and mesophyll cells illuminate cell type-specific transcription factor networks.

Authors:  Paja Sijacic; Marko Bajic; Elizabeth C McKinney; Richard B Meagher; Roger B Deal
Journal:  Plant J       Date:  2018-04       Impact factor: 6.417

9.  Cell-Fate Specification in Arabidopsis Roots Requires Coordinative Action of Lineage Instruction and Positional Reprogramming.

Authors:  Qiaozhi Yu; Pengxue Li; Nengsong Liang; Hong Wang; Meizhi Xu; Shuang Wu
Journal:  Plant Physiol       Date:  2017-08-18       Impact factor: 8.340

Review 10.  Volvox: A simple algal model for embryogenesis, morphogenesis and cellular differentiation.

Authors:  Gavriel Matt; James Umen
Journal:  Dev Biol       Date:  2016-07-19       Impact factor: 3.582

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