| Literature DB >> 26490137 |
Cara E Brook1, Roxanne Beauclair2,3, Olina Ngwenya3, Lee Worden4, Martial Ndeffo-Mbah5, Thomas M Lietman4,6,7, Sudhir K Satpathy8, Alison P Galvani5, Travis C Porco9,10,11.
Abstract
BACKGROUND: Leprosy is caused by infection with Mycobacterium leprae and is characterized by peripheral nerve damage and skin lesions. The disease is classified into paucibacillary (PB) and multibacillary (MB) leprosy. The 2012 London Declaration formulated the following targets for leprosy control: (1) global interruption of transmission or elimination by 2020, and (2) reduction of grade-2 disabilities in newly detected cases to below 1 per million population at a global level by 2020. Leprosy is treatable, but diagnosis, access to treatment and treatment adherence (all necessary to curtail transmission) represent major challenges. Globally, new case detection rates for leprosy have remained fairly stable in the past decade, with India responsible for more than half of cases reported annually.Entities:
Mesh:
Year: 2015 PMID: 26490137 PMCID: PMC4618538 DOI: 10.1186/s13071-015-1124-7
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Summary of data used in linear mixed effects regression
| Data | Years available | Spatial level | Source |
|---|---|---|---|
| New case counts, leprosy | 2008-2015 | District | [ |
| Enhanced case finding, 2012 and after | - | District | [ |
| TB incidence | 2008-2014 | State | [ |
| BCG coverage | Non time-varying regressor (5 yr avg) | State | [ |
| Fraction exhibiting grade 2 disability | 2011-2015 | State | [ |
| Fraction in children <15 years | 2011-2015 | State | [ |
| Fraction in multibacillary form | 2011-2015 | State | [ |
All data utilized in linear fixed effects regression models (Tables 2 and 3), including years available, spatial extent and sources
Regression coefficients for analysis of district level new case detection rates
| Model | Time trend | Covariate | Interaction | Enhanced CFA | Marginal | Conditional |
|---|---|---|---|---|---|---|
| I. Time only | − 0.0182 | - | - | - | 0.0014 | 0.993 |
| (− 0.027 to − 0.0035) | - | - | - | |||
| II. Case finding activity | − 0.0237 | - | - | 0.0811 | 0.0021 | 0.993 |
| (− 0.036 to − 0.011) | - | - | (0.021 to 0.21) | |||
| III. TB, time | − 0.0234 | − 8.83 × 10− 5 | - | 0.0646 | 0.0016 | 0.994 |
| (− 0.04 to − 0.0058) | (− 0.00015 to 0.00047) | - | (− 0.0078 to 0.22) | |||
| IV. TB, time, interaction | − 0.0625 | − 0.00173 | 5.57 × 10− 4 | 0.0529 | 0.002 | 0.994 |
| (− 0.093 to − 0.046) | (− 0.0027 to − 0.0011) | (0.00036 to 0.00089) | (− 0.025 to 0.19) | |||
| V. BCG, time | − 0.0236 | − 0.00738 | - | 0.0787 | 0.0078 | 0.993 |
| (− 0.036 to − 0.012) | (− 0.016 to 0.0088) | - | (0.0091 to 0.21) | |||
| VI. BCG, time, interaction | − 0.177 | − 0.00924 | 0.00178 | 0.0885 | 0.0047 | 0.993 |
| (− 0.25 to − 0.088) | (− 0.016 to 0.0068) | (7 × 10− 4 to 0.0026) | (0.023 to 0.22) | |||
| VII. Fraction grade 2, time | − 0.0171 | 2.34 × 10− 4 | - | 0.213 | 0.0073 | 0.993 |
| (− 0.03 to − 0.0062) | (0.00019 to 0.00039) | - | (0.14 to 0.39) | |||
| VIII. Fraction grade 2, time, interaction | − 0.0195 | − 9.82 × 10− 4 | 4.04 × 10− 4 | 0.213 | 0.0072 | 0.993 |
| (− 0.034 to 0.0043) | (− 0.0046 to 0.011) | (− 0.0034 to 0.0016) | (0.16 to 0.38) | |||
| IX. Fraction children, time | − 0.0227 | 0.00379 | - | 0.135 | 0.0035 | 0.993 |
| (− 0.039 to − 0.012) | (− 0.0072 to 0.009) | - | (0.058 to 0.28) | |||
| X. Fraction children, time, interaction | 0.0166 | 0.0259 | − 0.00496 | 0.144 | 0.0039 | 0.993 |
| (− 0.0083 to 0.041) | (0.0081 to 0.04) | (− 0.0077 to − 0.0026) | (0.081 to 0.29) | |||
| XI. Fraction MB, time | − 0.0226 | 0.0567 | - | 0.127 | 0.0026 | 0.993 |
| (− 0.039 to − 0.013) | (− 0.21 to 0.16) | - | (0.046 to 0.29) | |||
| XII. Fraction MB, time, interaction | − 0.127 | − 0.83 | 0.178 | 0.142 | 0.0037 | 0.993 |
| (− 0.2 to − 0.083) | (− 1.5 to − 0.52) | (0.092 to 0.30) | (0.076 to 0.32) | |||
The specific statistical models are specified in the Appendix. All models include calendar time in years, and all models except for the base model include a term “Enhanced CFA” indicating whether a particular district-year corresponds to one of the 209 districts selected for enhanced case finding activity. Models include tuberculosis incidence (state level), the average BCG coverage (state level), percent of grade 2 disability at diagnosis (state level), percent of cases in children (state level), or the fraction multibacillary (state level). Interaction with time is omitted, and then included, in each model in turn. Marginal R 2 values indicate the fraction of variance explained by the fixed effects, and conditional R 2 indicate the fraction of variance explained by both fixed and random effects; see text. Confidence intervals derived by spatial block bootstrap (with a radius of 1.5°; see text for details)
Spearman correlation between leprosy annual new case detection rate and selected state level quantities
| Leprosy | TB | BCG | Grade 2 | Childhood | Fraction | |
|---|---|---|---|---|---|---|
| ANCDR | incidence | rate | fraction | fraction | MB | |
| Leprosy | 1.0 | −0.029 | −0.093 | −0.032 | 0.47* | −0.40* |
| ANCDR | - | (−0.48 to 0.061) | (−0.31 to 0.11) | (−0.18 to 0.15) | (0.28 to 0.70) | (−0.50 to −0.27) |
| TB | - | 1.0 | 0.019 | −0.11 | −0.065 | −0.012 |
| incidence | (−0.21 to 0.32) | (−0.23 to −0.044) | (−0.32 to 0.18) | (−0.086 to 0.20) | ||
| BCG | - | - | 1.0 | −0.12 | 0.090 | −0.008 |
| rate | (−0.40 to −0.23) | (−0.18 to 0.28) | (−0.11 to 0.067) | |||
| Grade 2 | - | - | - | 1.0 | 0.041 | −0.20* |
| Fraction | (−0.13 to 0.13) | (−0.11 to −0.26) | ||||
| Childhood | - | - | - | - | 1.0 | −0.30* |
| Fraction | (−0.49 to −0.86) | |||||
| Fraction MB | - | - | - | - | - | 1.0 |
*statistically significant, alpha = 0.05, no adjustment for multiple comparisons
State and union territory abbreviations and regional classifications as used here. Data from the new state of Telengana are aggregated with Andhra Pradesh for consistency of comparison across multiple years
| State or Territory | Abbreviation | Region |
|---|---|---|
| Andaman and Nicobar | AN | Islands |
| Andhra Pradesh | AP | South |
| Arunachal Pradesh | AR | Northeast |
| Assam | AS | Northeast |
| Bihar | BR | East |
| Chhattisgarh | CG | East |
| Chandigarh | CH | North |
| Daman and Diu | DD | West |
| Dadra and Nagar Haveli | DN | West |
| Delhi | DL | North |
| Goa | GA | West |
| Gujarat | GJ | West |
| Himachal Pradesh | HP | North |
| Haryana | HR | North |
| Jharkhand | JH | East |
| Jammu and Kashmir | JK | North |
| Karnataka | KA | South |
| Kerala | KL | South |
| Lakshadweep | LD | Islands |
| Maharashtra | MH | West |
| Meghalaya | ML | Northwest |
| Manipur | MN | Northwest |
| Madhya Pradesh | MP | North |
| Mizoram | MZ | Northwest |
| Nagaland | NL | Northwest |
| Odisha (Orissa) | OR | East |
| Punjab | PB | North |
| Puducherry | PY | Islands |
| Rajasthan | RJ | West |
| Sikkim | SK | Northeast |
| Tamil Nadu | TN | South |
| Tripura | TR | Northeast |
| Uttaranchal | UK | North |
| Uttar Pradesh | UP | North |
| West Bengal | WB | East |
Fig. 1Temporal trends in new case detection rate per 10,000, by state or union territory (excluding the Union Territory of Dadra and Nagar Haveli (pop. approximately 350,000), which shows new case detection rates ranging from 3.8 to 9.9 per 10,000)
Fig. 2New case detection rate, by region and case finding effort. The average of districts selected for enhanced case finding activity are shown in solid; the average of other districts in dashed lines
Fig. 3Estimated linear trend in annual new case detection rate per district, adjusting for enhanced case finding in specific districts. Red corresponds to decreasing trend; blue to increasing. Map depicts estimated district-level linear trend lines from linear mixed effects regression model (model II; see text for details)