Literature DB >> 26488684

Integration of Switchable DNA-Based Hydrogels with Surfaces by the Hybridization Chain Reaction.

Jason S Kahn1, Alexander Trifonov1, Alessandro Cecconello1, Weiwei Guo1, Chunhai Fan2, Itamar Willner1.   

Abstract

A novel method to assemble acrylamide/acrydite DNA copolymer hydrogels on surfaces, specifically gold-coated surfaces, is introduced. The method involves the synthesis of two different copolymer chains consisting of hairpin A, HA, modified acrylamide copolymer and hairpin B, HB, acrylamide copolymer. In the presence of a nucleic acid promoter monolayer associated with the surface, the hybridization chain reaction between the two hairpin-modified polymer chains is initiated, giving rise to the cross-opening of hairpins HA and HB and the formation of a cross-linked hydrogel on the surface. By the cofunctionalization of the HA- and HB-modified polymer chains with G-rich DNA tethers that include the G-quadruplex subunits, hydrogels of switchable stiffness are generated. In the presence of K(+)-ions, the hydrogel associated with the surface is cooperatively cross-linked by duplex units of HA and HB, and K(+)-ion-stabilized G-quadruplex units, giving rise to a stiff hydrogel. The 18-crown-6-ether-stimulated elimination of the K(+)-ions dissociates the bridging G-quadruplex units, resulting in a hydrogel of reduced stiffness. The duplex/G-quadruplex cooperatively stabilized hydrogel associated with the surface reveals switchable electrocatalytic properties. The incorporation of hemin into the G-quadruplex units electrocatalyzes the reduction of H2O2. The 18-crown-6-ether stimulated dissociation of the hemin/G-quadruplex bridging units leads to a catalytically inactive hydrogel.

Entities:  

Keywords:  G-quadruplex; Impedance spectroscopy; Young’s modulus; acrylamide; electrocatalysis; stimuli-responsive

Mesh:

Substances:

Year:  2015        PMID: 26488684     DOI: 10.1021/acs.nanolett.5b04101

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  21 in total

1.  Electrochemiluminescent carbon dot-based determination of microRNA-21 by using a hemin/G-wire supramolecular nanostructure as co-reaction accelerator.

Authors:  Rui Zhang; Anyi Chen; Yanqing Yu; Yaqin Chai; Ying Zhuo; Ruo Yuan
Journal:  Mikrochim Acta       Date:  2018-08-28       Impact factor: 5.833

2.  Small molecule-induced DNA hydrogel with encapsulation and release properties.

Authors:  Muhan He; Nidhi Nandu; Taha Bilal Uyar; Maksim Royzen; Mehmet V Yigit
Journal:  Chem Commun (Camb)       Date:  2020-07-02       Impact factor: 6.222

3.  Optothermally Reversible Carbon Nanotube-DNA Supramolecular Hybrid Hydrogels.

Authors:  Nikhita D Mansukhani; Linda M Guiney; Zonghui Wei; Eric W Roth; Karl W Putz; Erik Luijten; Mark C Hersam
Journal:  Macromol Rapid Commun       Date:  2017-10-24       Impact factor: 5.734

Review 4.  From quasispecies to quasispaces: coding and cooperation in chemical and electronic systems.

Authors:  John S McCaskill
Journal:  Eur Biophys J       Date:  2018-03-02       Impact factor: 2.095

5.  Intelligent, Biodegradable, and Self-Healing Hydrogels Utilizing DNA Quadruplexes.

Authors:  Shizuma Tanaka; Kenta Wakabayashi; Kazuki Fukushima; Shinsuke Yukami; Ryuki Maezawa; Yuhei Takeda; Kohei Tatsumi; Yuichi Ohya; Akinori Kuzuya
Journal:  Chem Asian J       Date:  2017-08-29

6.  pH- and ligand-induced release of loads from DNA-acrylamide hydrogel microcapsules.

Authors:  Wei-Ching Liao; Sivan Lilienthal; Jason S Kahn; Marianna Riutin; Yang Sung Sohn; Rachel Nechushtai; Itamar Willner
Journal:  Chem Sci       Date:  2017-01-10       Impact factor: 9.825

7.  Aligner-mediated cleavage of nucleic acids and its application to isothermal exponential amplification.

Authors:  Wanghua Wu; Tao Zhang; Da Han; Hongliang Fan; Guizhi Zhu; Xiong Ding; Cuichen Wu; Mingxu You; Liping Qiu; Juan Li; Liqin Zhang; Xiang Lian; Rong Hu; Ying Mu; Jianguang Zhou; Weihong Tan
Journal:  Chem Sci       Date:  2018-02-28       Impact factor: 9.825

8.  Programmed catalysis within stimuli-responsive mechanically unlocked nanocavities in DNA origami tiles.

Authors:  Jianbang Wang; Zhixin Zhou; Zhenzhen Li; Itamar Willner
Journal:  Chem Sci       Date:  2020-10-27       Impact factor: 9.825

9.  Characterizing tissue stiffness at the tip of a rigid needle using an opto-mechanical force sensor.

Authors:  S V Beekmans; D Iannuzzi
Journal:  Biomed Microdevices       Date:  2016-02       Impact factor: 2.838

Review 10.  DNA Assembly-Based Stimuli-Responsive Systems.

Authors:  Shasha Lu; Jianlei Shen; Chunhai Fan; Qian Li; Xiurong Yang
Journal:  Adv Sci (Weinh)       Date:  2021-05-14       Impact factor: 16.806

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