| Literature DB >> 26488500 |
Meng Zhang1, Junjie Huang2, Xiuxiu Tan1, Jian Bai1, Hao Wang1, Yukun Ge1, Hu Xiong1, Jizhou Shi3, Wei Lu1, Zhaojie Lv1, Chaozhao Liang4.
Abstract
BACKGROUND: NFKBIA encodes the inhibitors of nuclear factor-κB (NF-κB), which regulate the translation of the genes involved in the inflammatory and immune reactions. Polymorphisms (rs2233406, rs3138053, and rs696) of NFKBIA have been implicated in susceptibility to many cancer types.Entities:
Mesh:
Substances:
Year: 2015 PMID: 26488500 PMCID: PMC4621165 DOI: 10.12659/msm.895257
Source DB: PubMed Journal: Med Sci Monit ISSN: 1234-1010
Figure 1Flow chart presenting the study selection procedure.
Characteristics of the enrolled studies.
| SNP | First author | Year | Ethnicity | Genotyping method | Source of control | Cancer type | Control | Case | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AA | AB | BB | Y or N | AA | AB | BB | ||||||||
| rs2233406 | Lu et al. | 2015 | Asian | PCR-RFLP | HB | OC | 478 | 190 | 19 | 0.982 | Y | 486 | 181 | 20 |
| Zhang et al. | 2014 | Asian | PCR | HB | HCC | 1292 | 321 | 28 | 0.123 | Y | 204 | 41 | 6 | |
| Cheng et al. | 2013 | Asian | PCR | HB | HCC | 438 | 78 | 4 | 0.797 | Y | 106 | 27 | 2 | |
| Lin et al. | 2012 | Asian | TaqMan | HB | ORC | 438 | 78 | 4 | 0.797 | Y | 351 | 101 | 10 | |
| Tan et al. | 2013 | Asian | PCR | HB | CRC | 163 | 69 | 5 | 0.459 | Y | 169 | 60 | 8 | |
| Wang et al. | 2014 | Asian | PCR-RFLP | HB | BC | 297 | 162 | 42 | N | 212 | 102 | 32 | ||
| Wang et al. | 2014 | Asian | PCR-RFLP | HB | BC | 297 | 162 | 42 | N | 46 | 25 | 0 | ||
| Wang et al. | 2014 | Asian | PCR-RFLP | HB | BC | 297 | 162 | 42 | N | 30 | 20 | 7 | ||
| He et al. | 2009 | Asian | PCR | HB | HCC | 685 | 181 | 20 | 0.056 | Y | 149 | 52 | 1 | |
| Han et al. | 2015 | Asian | PCR-RFLP | HB | PC | 586 | 321 | 29 | 0.058 | Y | 508 | 356 | 72 | |
| Umar et al. | 2013 | Asian | PCR | PB | ESCC | 149 | 141 | 21 | 0.106 | Y | 145 | 122 | 23 | |
| rs3138053 | Lin et al. | 2012 | Asian | TaqMan | HB | ORC | 438 | 78 | 4 | 0.797 | Y | 351 | 101 | 10 |
| Tan et al. | 2013 | Asian | PCR | HB | CRC | 163 | 69 | 5 | 0.459 | Y | 169 | 60 | 8 | |
| Gao et al. | 2014 | Asian | PCR | PB | HCC | 336 | 48 | 40 | N | 173 | 21 | 19 | ||
| Spink et al. | 2006 | Caucasian | PCR | PB | MM | 94 | 91 | 11 | 0.066 | Y | 64 | 77 | 16 | |
| He et al. | 2009 | Asian | PCR | HB | HCC | 780 | 106 | 0 | 0.058 | Y | 164 | 38 | 0 | |
| Han et al. | 2015 | Asian | PCR-RFLP | HB | PC | 586 | 321 | 29 | 0.058 | Y | 508 | 356 | 72 | |
| Zhang et al. | 2014 | Asian | PCR | PB | HCC | 1289 | 308 | 27 | 0.087 | Y | 214 | 38 | 1 | |
| Cheng et al. | 2013 | Asian | PCR | HB | HCC | 438 | 78 | 4 | 0.797 | Y | 106 | 27 | 2 | |
| rs696 | Umar et al. | 2013 | Asian | PCR | PB | ESCC | 59 | 165 | 87 | 0.219 | Y | 71 | 140 | 79 |
| Gao et al. | 2006 | Asian | PCR-RFLP | HB | CRC | 81 | 259 | 237 | 0.450 | Y | 26 | 109 | 64 | |
| Gao et al. | 2006 | Caucasian | PCR-RFLP | HB | CRC | 74 | 221 | 143 | 0.466 | Y | 29 | 72 | 54 | |
| Zhang et al. | 2014 | Asian | PCR | HB | HCC | 248 | 794 | 561 | 0.231 | Y | 55 | 109 | 84 | |
| Gao et al. | 2014 | Asian | HapMap | PB | HCC | 149 | 196 | 76 | 0.412 | Y | 65 | 115 | 33 | |
| Osborne et al. | 2005 | Caucasian | PCR | PB | HL | 8 | 22 | 20 | 0.64 | Y | 4 | 26 | 21 | |
| Chang et al. | 2009 | Caucasian | Taqman | PB | HL | 53 | 158 | 153 | 0.245 | Y | 92 | 215 | 156 | |
| Han et al. | 2015 | Asian | PCR-RFLP | HB | PC | 165 | 458 | 313 | 0.909 | Y | 173 | 442 | 321 | |
| Song et al. | 2011 | Caucasian | PCR-RFLP | PB | CRC | 212 | 531 | 262 | 0.06 | Y | 233 | 460 | 308 | |
PCR – polymerase chain reaction; PCR-RFLP – polymerase chain reaction-restriction fragment length polymorphism; Y – P(HWE) >0.05; N – P(HWE) ≤0.05; HCC – hepatocellular carcinoma; OC – ovarian cancer; BC – breast cancer; CRC – colorectal cancer; HL – Hodgkin lymphoma; PC – prostate cancer; ESCC – esophageal squamous cell carcinoma; MM – multiple myeloma; ORC – oral cancer; HB – hospital-based; PB – population-based;
Methodological quality of the included studies according to the Newcastle-Ottawa Scale.
| Author | Ethnicity | Adequacy of Case Definition | Representativeness of the Cases | Selection of Controls | Definition of Controls | Comparability Cases/ Controls | Ascertainment of exposure | Same method of ascertainment | Non-response rate | |
|---|---|---|---|---|---|---|---|---|---|---|
| rs2233406 | Lu et al. | Asian | * | * | NA | * | ** | * | * | * |
| Zhang et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Cheng et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Lin et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Tan et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Wang et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Wang et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Wang et al. | Asian | * | * | NA | * | ** | * | * | * | |
| He et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Han et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Umar et al. | Asian | * | * | * | * | ** | * | * | * | |
| rs3138053 | Lin et al. | Asian | * | * | NA | * | ** | * | * | * |
| Tan et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Gao et al. | Asian | * | * | * | * | ** | * | * | * | |
| Spink et al. | Caucasian | * | * | * | NA | ** | * | * | * | |
| He et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Han et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Zhang et al. | Asian | * | * | * | * | ** | * | * | * | |
| Cheng et al. | Asian | * | * | NA | * | ** | * | * | * | |
| rs696 | Umar et al. | Asian | * | * | * | * | ** | * | * | * |
| Gao et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Gao et al. | Caucasian | * | * | NA | * | ** | * | * | * | |
| Zhang et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Gao et al. | Asian | * | * | * | * | ** | * | * | * | |
| Osborne et al. | Caucasian | * | * | * | NA | ** | * | * | * | |
| Chang et al. | Caucasian | * | * | * | NA | ** | * | * | * | |
| Han et al. | Asian | * | * | NA | * | ** | * | * | * | |
| Song et al. | Caucasian | * | * | * | * | ** | * | * | * |
This table identifies ‘high’ quality choices with a ‘star’. A study can be awarded a maximum of one star for each numbered item within the Selection and Exposure categories. A maximum of two stars can be given for Comparability. *, Yes; NA – not applicable. ().
Results of meta-analysis for rs2233406 polymorphism in NFKBA and cancer susceptibility.
| Variables (rs2233406) | Case/control | C | CC | CT | CC+CT | CC | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | |||||||
| Total | 3674/7241 | 1.098 (0.944–1.277) | 0.000 | 47.1 | 1.387 (0.942–2.042) | 0.017 | 28.9 | 1.077 (0.931–1.246) | 0.030 | 24.8 | 1.097 (0.937–1.283) | 0.005 | 36.2 | 1.390 (0.977–1.978) | 0.043 | 21.8 |
| Source of control | ||||||||||||||||
| HB | 3384/6930 | 1.112 (0.942–1.312) | 0.000 | 49.4 | 1.417 (0.914–2.198) | 0.014 | 32.1 | 1.099 (0.941–1.284) | 0.031 | 25.9 | 1.117 (0.944–1.323) | 0.005 | 37.9 | 1.409 (0.940–2.111) | 0.032 | 25.7 |
| Cancer type | ||||||||||||||||
| HCC | 588/3047 | 1.082 (0.851–1.375) | 0.236 | 9.5 | 1.038 (0.348–3.103) | 0.187 | 16.3 | 1.131 (0.789–1.622) | 0.082 | 35.8 | 1.115 (0.821–1.515) | 0.146 | 23.0 | 1.014 (0.324–3.175) | 0.165 | 19.9 |
| BC | 474/1503 | 0.841 (0.581–1.215) | 0.132 | 31.2 | 0.390 (0.026–5.968) | 0.048 | 55.2 | 1.222 (0.673–2.221) | 0.693 | 0.0 | 0.889 (0.695–1.138) | 0.616 | 0.0 | 0.396 (0.024–6.446) | 0.043 | 57.0 |
| HWE | ||||||||||||||||
| Y | 3200/5738 | 1.148 (0.967–1.362) | 0.002 | 48.9 | 1.535 (0.982–2.400) | 0.046 | 26.1 | 1.103 (0.924–1.318) | 0.014 | 36.2 | 1.137 (0.944–1.369) | 0.004 | 43.7 | 0.099 | 17.6 | |
| N | 474/1503 | 0.952 (0.691–1.310) | 0.096 | 32.9 | 0.994 (0.398–2.484) | 0.084 | 35.5 | 0.954 (0.750–1.214) | 0.624 | 0.0 | 0.949 (0.758–1.188) | 0.398 | 0.0 | 1.009 (0.425–2.396) | 0.094 | 33.3 |
Figure 2AMeta-analysis of the association between NFKBIA rs3138053 polymorphism and overall cancer susceptibility (C vs. T).
Results of meta-analysis for rs3138053 polymorphism in NFKBA and cancer susceptibility.
| Variables (rs3138053) | Case/control | C | CC | TC | CC+TC | CC | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | |||||||
| Total | 2595/5343 | 0.000 | 97.8 | 1.683 (0.979–2.891) | 0.023 | 34.8 | 1.178 (0.954–1.455) | 0.012 | 39.9 | 1.209 (0.964–1.517) | 0.002 | 48.9 | 1.632 (1.001–2.660) | 0.055 | 26.3 | |
| Source of control | ||||||||||||||||
| HB | 1972/3099 | 0.000 | 97.4 | 2.652 (1.810–3.886) | 0.767 | 0.0 | 1.335 (1.075–1.657) | 0.093 | 24.7 | 0.114 | 21.4 | 0.867 | 39.0 | |||
| PB | 623/2244 | 0.000 | 98.6 | 1.029 (0.415–2.551) | 0.068 | 39.3 | 0.913 (0.662–1.259) | 0.205 | 13.5 | 0.928 (0.639–1.347) | 0.074 | 37.9 | 1.632 (1.001–2.660) | 0.105 | 26.3 | |
| Ethnicity | ||||||||||||||||
| Asian | 2438/5147 | 13.628 (4.922–37.731) | 0.000 | 97.8 | 1.577 (0.817–3.043) | 0.013 | 42.9 | 1.168 (0.920–1.483) | 0.006 | 44.5 | 1.192 (0.923_1.539) | 0.001 | 54.9 | 1.553 (0.851–2.834) | 0.031 | 35.2 |
| Cancer type | ||||||||||||||||
| HCC | 590/3030 | 0.007 | 63.8 | 0.718 (0.070–7.340) | 0.077 | 46.2 | 1.206 (0.706–2.062) | 0.007 | 63.7 | 1.192 (0.668–2.127) | 0.003 | 69.1 | 0.716 (0.080–6.438) | 0.094 | 41.3 | |
| HWE | ||||||||||||||||
| Y | 2382/4919 | 10.585 (3.663–30.581) | 0.000 | 98.0 | 0.217 | 8.5 | 1.216 (0.975–1.518) | 0.012 | 40.1 | 1.260 (0.992–1.601) | 0.003 | 49.3 | 0.296 | 3.3 | ||
| N | 213/424 | 12.036 (8.430–17.184) | – | – | 0.923 (0.519–1.641) | – | – | 0.850 (0.493–1.465) | – | – | 0.883 (0.582–1.339) | – | – | 0.940 (0.530–1.667) | – | – |
Figure 2BMeta-analysis of the association between NFKBIA rs696 polymorphism and overall cancer susceptibility (CC+CT vs. TT).
Results of meta-analysis for rs696 polymorphism in NFKBA and cancer susceptibility.
| Variables (rs696) | Case/ control | C | CC | CT | CC+CT | CC | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | OR (95% CI) | I2 (%) | |||||||
| Total | 3556/5705 | 0.952 (0.894–1.014) | 0.121 | 13.8 | 0.891 (0.783–1.013) | 0.194 | 79.5 | 0.884 (0.738–1.058) | 0.044 | 24.6 | 0.107 | 15.3 | 0.946 (0.811–1.103) | 0.025 | 29.5 | |
| Ethnicity | ||||||||||||||||
| Caucasian | 1670/1857 | 0.971 (0.882–1.069) | 0.034 | 0.0 | 0.930 (0.766–1.128) | 0.055 | 36.5 | 0.459 | 0.0 | 0.851 (0.719–1.007) | 0.304 | 3.1 | 1.002 (0.718–1.399) | 0.010 | 53.7 | |
| Asian | 1886/3848 | 0.939 (0.863–1.021) | 0.431 | 42.6 | 0.861 (0.725–1.023) | 0.527 | 0.0 | 0.921 (0.691–1.227) | 0.015 | 45.8 | 0.901 (0.778–1.044) | 0.054 | 32.5 | 0.923 (0.798–1.068) | 0.306 | 2.9 |
| Source of control | ||||||||||||||||
| PB | 2018/2151 | 0.963 (0.882–1.051) | 0.047 | 34.2 | 0.906 (0.759–1.081) | 0.080 | 27.1 | 0.908 (0.687–1.200) | 0.050 | 33.4 | 0.887 (0.765–1.028) | 0.075 | 28.1 | 0.945 (0.718–1.243) | 0.016 | 45.0 |
| HB | 1538/3554 | 0.941 (0.858–1.031) | 0.397 | 0.0 | 0.875 (0.726–1.054) | 0.439 | 0.0 | 0.868 (0.656–1.148) | 0.093 | 28.3 | 0.870 (0.736–1.028) | 0.205 | 11.9 | 0.942 (0.781–1.136) | 0.165 | 16.9 |
| Cancer type | ||||||||||||||||
| HL | 514/414 | 0.116 | 34.8 | 0.076 | 46.6 | 1.126 (0.408–3.111) | 0.118 | 34.8 | 0.758 (0.534–1.077) | 0.080 | 45.3 | 0.347 | 0.0 | |||
| CRC | 1355/2020 | 1.003 (0.907–1.110) | 0.269 | 5.7 | 1.014 (0.825–1.2480 | 0.702 | 0.0 | 0.901 (0.673–1.206) | 0.184 | 16.7 | 0.908 (0.760–1.086) | 0.726 | 0.0 | 0.995 (0.680–1.456) | 0.009 | 62.4 |
I2 – 0–25, means no heterogeneity; 25–50, means modest heterogeneity; >50, means high heterogeneity; HWE – Hardy-Weinberg equilibrium; Y – polymorphisms conformed to HWE in the control group; N – polymorphisms did not conform to HWE in the control group; Pa – P value of Q test for heterogeneity test; *means statistically significant (P<0.05); The source of control, HB – hospital-based; PB – population-based; HCC – hepatocellular carcinoma; HL – Hodgkin lymphoma; CRC – colorectal cancer; BC – breast cancer.
Figure 2CSubgroup analysis of the association between NFKBIA polymorphisms and overall cancer risk by HWE (Hardy-Weinberg equilibrium).
Figure 3APublication bias examinations by Begg’s funnel plots and Egger’s test (rs696: CC+CT vs. TT). Asymmetrical plots or P<0.10 suggest potential bias. Each point represents a separate study for the indicated association, and the horizontal line depicts mean effect size. Logor natural logarithm of OR; s.e. standard error.
Figure 3BPublication bias examinations by Begg’s funnel plots and Egger’s test (rs2233406: CC vs. CT+TT). Asymmetrical plots or P<0.10 suggest potential bias. Each point represents a separate study for the indicated association, and the horizontal line depicts mean effect size. Logor natural logarithm of OR; s.e. standard error.