Literature DB >> 26470846

Destabilization of strigolactone receptor DWARF14 by binding of ligand and E3-ligase signaling effector DWARF3.

Li-Hua Zhao1,2, X Edward Zhou3, Wei Yi1, Zhongshan Wu1,3,4, Yue Liu1, Yanyong Kang3, Li Hou1,3, Parker W de Waal3, Suling Li1, Yi Jiang1, Adrian Scaffidi5, Gavin R Flematti5, Steven M Smith5,6,7, Vinh Q Lam8, Patrick R Griffin8, Yonghong Wang7, Jiayang Li7, Karsten Melcher1,3, H Eric Xu1,3.   

Abstract

Strigolactones (SLs) are endogenous hormones and exuded signaling molecules in plant responses to low levels of mineral nutrients. Key mediators of the SL signaling pathway in rice include the α/β-fold hydrolase DWARF 14 (D14) and the F-box component DWARF 3 (D3) of the ubiquitin ligase SCF(D3) that mediate ligand-dependent degradation of downstream signaling repressors. One perplexing feature is that D14 not only functions as the SL receptor but is also an active enzyme that slowly hydrolyzes diverse natural and synthetic SLs including GR24, preventing the crystallization of a binary complex of D14 with an intact SL as well as the ternary D14/SL/D3 complex. Here we overcome these barriers to derive a structural model of D14 bound to intact GR24 and identify the interface that is required for GR24-mediated D14-D3 interaction. The mode of GR24-mediated signaling, including ligand recognition, hydrolysis by D14, and ligand-mediated D14-D3 interaction, is conserved in structurally diverse SLs. More importantly, D14 is destabilized upon the binding of ligands and D3, thus revealing an unusual mechanism of SL recognition and signaling, in which the hormone, the receptor, and the downstream effectors are systematically destabilized during the signal transduction process.

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Year:  2015        PMID: 26470846      PMCID: PMC4650425          DOI: 10.1038/cr.2015.122

Source DB:  PubMed          Journal:  Cell Res        ISSN: 1001-0602            Impact factor:   25.617


  51 in total

1.  Development and testing of a general amber force field.

Authors:  Junmei Wang; Romain M Wolf; James W Caldwell; Peter A Kollman; David A Case
Journal:  J Comput Chem       Date:  2004-07-15       Impact factor: 3.376

2.  Efficient rebuilding of protein structures.

Authors:  G J Kleywegt; T A Jones
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1996-07-01

3.  Suppression of tiller bud activity in tillering dwarf mutants of rice.

Authors:  Shinji Ishikawa; Masahiko Maekawa; Tomotsugu Arite; Kazumitsu Onishi; Itsuro Takamure; Junko Kyozuka
Journal:  Plant Cell Physiol       Date:  2005-01-19       Impact factor: 4.927

4.  F-box protein MAX2 has dual roles in karrikin and strigolactone signaling in Arabidopsis thaliana.

Authors:  David C Nelson; Adrian Scaffidi; Elizabeth A Dun; Mark T Waters; Gavin R Flematti; Kingsley W Dixon; Christine A Beveridge; Emilio L Ghisalberti; Steven M Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-09       Impact factor: 11.205

Review 5.  Strigolactones as small molecule communicators.

Authors:  Yuichiro Tsuchiya; Peter McCourt
Journal:  Mol Biosyst       Date:  2011-10-25

6.  Strigolactone Hormones and Their Stereoisomers Signal through Two Related Receptor Proteins to Induce Different Physiological Responses in Arabidopsis.

Authors:  Adrian Scaffidi; Mark T Waters; Yueming K Sun; Brian W Skelton; Kingsley W Dixon; Emilio L Ghisalberti; Gavin R Flematti; Steven M Smith
Journal:  Plant Physiol       Date:  2014-05-07       Impact factor: 8.340

Review 7.  Diverse roles of strigolactones in plant development.

Authors:  Philip B Brewer; Hinanit Koltai; Christine A Beveridge
Journal:  Mol Plant       Date:  2012-11-15       Impact factor: 13.164

8.  MAX1 and MAX2 control shoot lateral branching in Arabidopsis.

Authors:  Petra Stirnberg; Karin van De Sande; H M Ottoline Leyser
Journal:  Development       Date:  2002-03       Impact factor: 6.868

9.  The structure of the karrikin-insensitive protein (KAI2) in Arabidopsis thaliana.

Authors:  Rohan Bythell-Douglas; Mark T Waters; Adrian Scaffidi; Gavin R Flematti; Steven M Smith; Charles S Bond
Journal:  PLoS One       Date:  2013-01-18       Impact factor: 3.240

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  56 in total

1.  Structural Analysis of Strigolactone-Related Gene Products.

Authors:  Inger Andersson; Gunilla H Carlsson; Dirk Hasse
Journal:  Methods Mol Biol       Date:  2021

Review 2.  Stereospecificity in strigolactone biosynthesis and perception.

Authors:  Gavin R Flematti; Adrian Scaffidi; Mark T Waters; Steven M Smith
Journal:  Planta       Date:  2016-04-22       Impact factor: 4.116

3.  Flexibility of the petunia strigolactone receptor DAD2 promotes its interaction with signaling partners.

Authors:  Hui Wen Lee; Prachi Sharma; Bart J Janssen; Revel S M Drummond; Zhiwei Luo; Cyril Hamiaux; Thomas Collier; Jane R Allison; Richard D Newcomb; Kimberley C Snowden
Journal:  J Biol Chem       Date:  2020-02-17       Impact factor: 5.157

4.  Functional redundancy in the control of seedling growth by the karrikin signaling pathway.

Authors:  John P Stanga; Nicholas Morffy; David C Nelson
Journal:  Planta       Date:  2016-01-11       Impact factor: 4.116

5.  Structural biology: Signal locked in.

Authors:  Kimberley C Snowden; Bart J Janssen
Journal:  Nature       Date:  2016-08-03       Impact factor: 49.962

6.  Common Components of the Strigolactone and Karrikin Signaling Pathways Suppress Root Branching in Arabidopsis.

Authors:  Stéphanie M Swarbreck; Amirah Mohammad-Sidik; Julia M Davies
Journal:  Plant Physiol       Date:  2020-07-20       Impact factor: 8.340

Review 7.  The perception of strigolactones in vascular plants.

Authors:  Shelley Lumba; Duncan Holbrook-Smith; Peter McCourt
Journal:  Nat Chem Biol       Date:  2017-05-17       Impact factor: 15.040

Review 8.  Unveiling the functional diversity of the alpha/beta hydrolase superfamily in the plant kingdom.

Authors:  Jeffrey T Mindrebo; Charisse M Nartey; Yoshiya Seto; Michael D Burkart; Joseph P Noel
Journal:  Curr Opin Struct Biol       Date:  2016-09-21       Impact factor: 6.809

9.  LATERAL BRANCHING OXIDOREDUCTASE acts in the final stages of strigolactone biosynthesis in Arabidopsis.

Authors:  Philip B Brewer; Kaori Yoneyama; Fiona Filardo; Emma Meyers; Adrian Scaffidi; Tancred Frickey; Kohki Akiyama; Yoshiya Seto; Elizabeth A Dun; Julia E Cremer; Stephanie C Kerr; Mark T Waters; Gavin R Flematti; Michael G Mason; Georg Weiller; Shinjiro Yamaguchi; Takahito Nomura; Steven M Smith; Koichi Yoneyama; Christine A Beveridge
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-18       Impact factor: 11.205

10.  Structural modelling and transcriptional responses highlight a clade of PpKAI2-LIKE genes as candidate receptors for strigolactones in Physcomitrella patens.

Authors:  Mauricio Lopez-Obando; Caitlin E Conn; Beate Hoffmann; Rohan Bythell-Douglas; David C Nelson; Catherine Rameau; Sandrine Bonhomme
Journal:  Planta       Date:  2016-03-15       Impact factor: 4.116

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