| Literature DB >> 26464767 |
Fatemeh Azadegan-Dehkordi1, Nader Bagheri2, Mahsa Shirzad3, Mohammad Hossein Sanei4, Morteza Hashemzadeh-Chaleshtori1, Mahmoud Rafieian-Kopaei3, Mohammad Amin Tabatabaiefar5, Hedayatollah Shirzad1.
Abstract
BACKGROUND: Helicobacter pylori infection is associated with gastritis and marked infiltration of the gastric mucosa by several cytokines secreting inflammatory cells that contribute to sustained local inflammation. In this study, we sought to examine IL-6 expression in H. pylori-infected and uninfected gastric mucosa and elucidate the implication in the pathogenesis of H. pylori-associated gastritis in human.Entities:
Keywords: Gastritis; Helicobacter pylori; IL-6; Virulence Factors
Year: 2015 PMID: 26464767 PMCID: PMC4600329 DOI: 10.5812/jjm.21701
Source DB: PubMed Journal: Jundishapur J Microbiol ISSN: 2008-3645 Impact factor: 0.747
PCR Primers for Amplification of Virulence Factors
| Primer Designation | Primer Sequence | Size of PCR Product, bp |
|---|---|---|
|
| 109 bp | |
| HP1: 5’-CTGGAGAGACTAAGCCCTCC-3’ | ||
| HP2: 5’-ATTACTGACGCTGATTGTGC-3’ | ||
|
| 249 bp | |
| GLM MF: 5’-AAGCTTTTAGGGGTGTTAGGGGTTT-3' | ||
| GLM MR: 5’-AAGCTTACTTTCTAACACTAACGC-3' | ||
|
| ||
| vacAmF: 5’-CAATCTGTCCAATCAAGCGAG-3’ | 567 bp (m1) | |
| vacAmR: 5’-GCGTCTAAATAATTCCAAGG-3’ | 642 bp (m2) | |
|
| ||
| VA1-F: 5’-ATGGAAATACAACAAACACAC-3’ | 259 bp (s1) | |
| VA1-R: 5’-CTGCTTGAATGCGCCAAAC-3’ | 286 bp (s2) | |
|
| 232 bp | |
| cag1: 5’-ATGACTAACGAAACTATTGATC-3’ | ||
| cag2 5’-CAGGATTTTTGATCGCTTTATT-3’ |
Primer and Probe Sequences Used in This Study
| Gene | Primer and Probe Sequence |
|---|---|
|
| |
| Forward 5-AGCCTCGCCTTTGCCGA-3 | |
| Reverse 5-CTGGTGCCTGGGGCG-3 | |
| Probe FAM-CCGCCGCCCGTCCACACCCGCC-TAMRA | |
|
| |
| Forward 5- GGTACATCCTCGACGGCATCT-3 | |
| Reverse 5- GTGCCTCTTTGCTGCTTTCAC-3 | |
| Probe FAM-TGTTACTCTTGTTACATGTCTCCTTTCTCAGGGCT-TAMRA |
Figure 1.Product From PCR Amplification of glmM Gene
Lane M, 100-bp ladder; lane 1, no-template control; lane 2 positive control; lanes 3 - 6, amplicon for glmM gene.
Figure 2.Product From PCR Amplification of 16srRNA Gene
Lane M, 100 bp ladder; lane 1, no-template control; lane 2 positive control; lanes 3 - 6, amplicon for 16srRNA gene.
Figure 3.Relative Expression Level of IL-6 mRNA in Gastric Mucosa Is Shown by H. pylori Status
45975
Figure 4.Relative Expression Level of IL-6 mRNA in H. pylori-Infected Patients is Shown by the Grade of Chronic Gastritis