| Literature DB >> 26463065 |
J Joe Hull1, Meixian Wang2,3.
Abstract
The Gα subunits of heterotrimeric G proteins play critical roles in the activation of diverse signal transduction cascades. However, the role of these genes in chemosensation remains to be fully elucidated. To initiate a comprehensive survey of signal transduction genes, we used homology-based cloning methods and transcriptome data mining to identity Gα subunits in the western tarnished plant bug (Lygus hesperus Knight). Among the nine sequences identified were single variants of the Gαi, Gαo, Gαs, and Gα12 subfamilies and five alternative splice variants of the Gαq subfamily. Sequence alignment and phylogenetic analyses of the putative L. hesperus Gα subunits support initial classifications and are consistent with established evolutionary relationships. End-point PCR-based profiling of the transcripts indicated head specific expression for LhGαq4, and largely ubiquitous expression, albeit at varying levels, for the other LhGα transcripts. All subfamilies were amplified from L. hesperus chemosensory tissues, suggesting potential roles in olfaction and/or gustation. Immunohistochemical staining of cultured insect cells transiently expressing recombinant His-tagged LhGαi, LhGαs, and LhGαq1 revealed plasma membrane targeting, suggesting the respective sequences encode functional G protein subunits.Entities:
Keywords: Gα subunit; Lygus hesperus; expression profile; gene cloning; heterotrimeric G protein; plant bug; signal transduction
Year: 2014 PMID: 26463065 PMCID: PMC4553527 DOI: 10.3390/insects6010054
Source DB: PubMed Journal: Insects ISSN: 2075-4450 Impact factor: 2.769
Oligonucleotide primers used.
| Primer | Sequence (5'–3') | Primer | Sequence (5'–3') | ||
|---|---|---|---|---|---|
| Ga deg 1 F | ACNATNGTNAARCARATG (TIVKQM) | Degenerate PCR | LhGao 679 F | CGACGTGATACAGAGGATG | Transcriptional Expression Profiling |
| Ga deg 2 F | GAYGTNGGNGGNCARYG (DVGGQR) | LhGao 1,211 R | TTGTCAATGGCGACTTCTT | ||
| Ga deg 3 F | AARTGGATHCAYTGYTT (KWIHCF) | LhGai 499 F | AACTACGTTCCAACTCAGC | ||
| Ga deg 1a R | RTCTTYTTRTTNAGRAA (FLNKKD) | LhGai 1,026 R | ATCAGTGACAGCATCGAAG | ||
| Ga deg 1b R | RTCYTGYTTRTTNAGRAA (FLNKQD) | LhGas 331 F | GTCCGCGTCGACTATATAC | ||
| Ga deg 2 R | TCNGTNACNGCRTCRAANAC (VFDAVTD) | LhGas 862 R | CCTTGATCTTCTCTGCCAG | ||
| LhGaq 468 F1 | GGAAATCGATAGAGTGGCAG | ||||
| LhGai sp F2 | CAAGTGGTTTGTCGAGACTTCC | 5' & 3' RACE | LhGaq 474 F2 | GGCGAGAATAGAGAGTCCAG | |
| LhGai sp R1 | CATCTTCTGCAAGTACTAGGTCGT | LhGaq 1,036 R1 | AAGGTTGTACTCCTTGAGATTT | ||
| LhGai sp R2 | TGTTAGTGTCAGTAGCGCAGGT | LhGaq 1,035 R2 | CTAGATTGAATTCTTTGAGTGCA | ||
| LhGai sp F2b | GGTTCCAATACGTATGAAGAAGCAG | LhGa12/13 307 F | TTGAGCCGGAATTGATCAA | ||
| LhGaq2 F1 | TCCTTGTCGCGCTCAGTGAATACG | LhGa12/13 834 R | CCACGAGAACTTGATCGAA | ||
| LhGaq2 F2 | TCGAATCGGAAAATGAGAACCGAATGGA | ||||
| LhGaq2 R1 | GGACGAGTGCTGGAACCAGGGGTA | LH Gas no stop R | TAGCAACTCATATTGGCG | Cellular Localization | |
| LhGaq2 R2 | TCCATTCGGTTCTCATTTTCCGATTCGA | LhGaq no stop R | AACAAGGTTGTACTCCTTGAGA | ||
| LhGas F1 | CCGCCATCATATTCGTGACCGCCT | LH Gi no stop R | GAATAGGCCACAATTTTTTAAGTTT | ||
| LhGas F2 | AAGACCCCACGCAGAACCGTCTCA | ||||
| LhGas R1 | TGAGACGGTTCTGCGTGGGGTCTT | ||||
| LhGas R2 | AGGCGGTCACGAATATGATGGCGG | ||||
| LhGas + stop R | TTATAGCAACTCATATTGGCG | Full Length Clones | |||
| LH Gas start F | AAATCGTCATGGGGTGC | ||||
| LhGaq start F | AGATGGCGTGCTGTTTG | ||||
| LhGaq end R | TTAAACAAGGTTGTACTCCTTGAGA | ||||
| LhGi start F | TAATGGGTTGCGCGATCAG | ||||
| LhGi end R | TTAGAATAGGCCACAATTTTTTAAGTTT | ||||
| LhGao start F | ATGGGCTGTGCAATGTCTG | ||||
| LhGao stop R | TTAGTAAAGTCCACAACC | ||||
| LhGa12/13 start | ATGGCGAGTGATATATTTTG | ||||
| LhGa12/13 stop | TCATTGCAACATGAGGGAT |
Figure 1Thermocycler conditions used.
Top five BLASTx hits for LhGα sequences.
| Query | Description | Accession | E Value | % identity | % positives |
|---|---|---|---|---|---|
| LhGαs | Guanine nucleotide-binding protein G(s) subunit alpha [ | KDR14965.1 | 0.00E + 00 | 340/379 (90%) | 359/379 (94%) |
| PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha [ | XP_008468199.1 | 0.00E + 00 | 338/380 (89%) | 360/380 (94%) | |
| PREDICTED: guanine nucleotide-binding protein G(s) subunit alpha [ | XP_001944148.1 | 0.00E + 00 | 335/380 (88%) | 362/380 (95%) | |
| guanine nucleotide binding protein, alpha stimulating activity polypeptide [ | EFX88427.1 | 0.00E + 00 | 330/379 (87%) | 359/379 (94%) | |
| guanine nucleotide-binding protein G, putative [ | XP_002431834.1 | 0.00E + 00 | 331/380 (87%) | 355/380 (93%) | |
| LhGαi | Guanine nucleotide-binding protein G(i) subunit alpha [ | KDR22153.1 | 0.00E + 00 | 321/355 (90%) | 339/355 (95%) |
| PREDICTED: guanine nucleotide-binding protein G(i) subunit alpha-like [ | XP_003707938.1 | 0.00E + 00 | 314/355 (88%) | 333/355 (93%) | |
| PREDICTED: G protein alpha i subunit [ | XP_008200240.1 | 0.00E + 00 | 313/355 (88%) | 331/355 (93%) | |
| PREDICTED: guanine nucleotide-binding protein G(i) subunit alpha-like [ | XP_395172.2 | 0.00E + 00 | 311/355 (88%) | 331/355 (93%) | |
| PREDICTED: guanine nucleotide-binding protein G(i) subunit alpha-like [ | XP_003393073.1 | 0.00E + 00 | 310/355 (87%) | 330/355 (92%) | |
| LhGαq1 | GTP-binding protein alpha subunit, gna [ | KFB50356.1 | 0.00E + 00 | 336/353 (95%) | 343/353 (97%) |
| AGAP005079-PI [ | XP_313956.1 | 0.00E + 00 | 336/353 (95%) | 343/353 (97%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha isoform X1 [ | XP_001948628.2 | 0.00E + 00 | 333/353 (94%) | 346/353 (98%) | |
| GTP-binding protein alpha subunit, gna [ | XP_001660884.1 | 0.00E + 00 | 335/353 (95%) | 343/353 (97%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like isoform 1 [ | XP_003702524.1 | 0.00E + 00 | 335/353 (95%) | 344/353 (97%) | |
| LhGαq2 | PREDICTED: G protein alpha q subunit isoform X2 [ | XP_008178833.1 | 0.00E + 00 | 322/353 (91%) | 337/353 (95%) |
| AGAP005079-PB [Anopheles gambiae str. PEST] | XP_001688493.1 | 0.00E + 00 | 325/353 (92%) | 334/353 (94%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like isoform 5 [ | XP_003702528.1 | 0.00E + 00 | 318/353 (90%) | 338/353 (95%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like isoform X5 [ | XP_006562642.1 | 0.00E + 00 | 319/353 (90%) | 334/353 (94%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like isoform X13 [ | XP_006615865.1 | 0.00E + 00 | 318/353 (90%) | 333/353 (94%) | |
| LhGαq3 | PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like isoform 2 [ | XP_003702525.1 | 0.00E + 00 | 334/353 (95%) | 343/353 (97%) |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha isoform X3 [ | XP_008178834.1 | 0.00E + 00 | 331/353 (94%) | 345/353 (97%) | |
| AGAP005079-PF [Anopheles gambiae str. PEST] | XP_001688489.1 | 0.00E + 00 | 333/353 (94%) | 343/353 (97%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like isoform X8 [ | XP_623211.2 | 0.00E + 00 | 328/353 (93%) | 341/353 (96%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like isoform 1 [ | XP_003702524.1 | 0.00E + 00 | 325/353 (92%) | 338/353 (95%) | |
| LhGαq4 | PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like isoform 3 [ | XP_003702526.1 | 0.00E + 00 | 324/353 (92%) | 334/353 (94%) |
| G protein alpha q isoform 2 [ | NP_001128385.1 | 0.00E + 00 | 322/353 (91%) | 335/353 (94%) | |
| PREDICTED: G protein alpha q subunit isoform X4 [ | XP_008178835.1 | 0.00E + 00 | 320/353 (91%) | 336/353 (95%) | |
| GTP-binding protein alpha subunit, gna [ | XP_001660885.1 | 0.00E + 00 | 322/353 (91%) | 334/353 (94%) | |
| AGAP005079-PD [Anopheles gambiae str. PEST] | XP_001688487.1 | 0.00E + 00 | 322/353 (91%) | 334/353 (94%) | |
| LhGαq5 | PREDICTED: G protein alpha q subunit-like [ | XP_008479779.1 | 4.00E − 102 | 145/157 (92%) | 151/157 (96%) |
| PREDICTED: G protein alpha q subunit isoform X4 [ | XP_008178835.1 | 2.00E − 99 | 152/193 (79%) | 155/193 (80%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha-like isoform 3 [ | XP_003702526.1 | 2.00E − 99 | 153/193 (79%) | 155/193 (80%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha isoform X3 [ | XP_008195246.1 | 1.00E − 98 | 152/193 (79%) | 155/193 (80%) | |
| PREDICTED: guanine nucleotide-binding protein G(q) subunit alpha isoform X5 [ | XP_008178836.1 | 2.00E − 98 | 152/193 (79%) | 155/193 (80%) | |
| LhGα12 | Guanine nucleotide-binding protein subunit alpha-like protein [ | EFN86700.1 | 0.00E + 00 | 287/367 (78%) | 327/367 (89%) |
| PREDICTED: guanine nucleotide-binding protein subunit alpha homolog [ | XP_394382.2 | 0.00E + 00 | 286/367 (78%) | 326/367 (88%) | |
| PREDICTED: guanine nucleotide-binding protein subunit alpha homolog [ | XP_001600076.1 | 0.00E + 00 | 282/363 (78%) | 324/363 (89%) | |
| Guanine nucleotide-binding protein subunit alpha-like protein [ | EGI64184.1 | 0.00E + 00 | 288/368 (78%) | 328/368 (89%) | |
| PREDICTED: guanine nucleotide-binding protein subunit alpha homolog [ | XP_003402866.1 | 0.00E + 00 | 283/367 (77%) | 325/367 (88%) | |
| LhGαo | Guanine nucleotide-binding protein G(o) subunit alpha [ | P38404.1 | 0.00E + 00 | 346/354 (98%) | 349/354 (98%) |
| Guanine nucleotide-binding protein G(o) subunit alpha [ | KDR16702.1 | 0.00E + 00 | 345/354 (97%) | 348/354 (98%) | |
| Guanine nucleotide-binding protein G(o) subunit alpha [ | EFN66163.1 | 0.00E + 00 | 344/354 (97%) | 348/354 (98%) | |
| PREDICTED: guanine nucleotide-binding protein G(o) subunit alpha-like isoform 1 [ | XP_003701784.1 | 0.00E + 00 | 342/354 (97%) | 347/354 (98%) | |
| PREDICTED: guanine nucleotide-binding protein G(o) subunit alpha [ | XP_008545405.1 | 0.00E + 00 | 339/354 (96%) | 346/354 (97%) |
Figure 2Alternative splice variants of LhGαq. (A) MUSCLE-based sequence alignment of LhGαq1-4; (B) MUSCLE-based sequence alignment of LhGαq5 with LhGαq1 and Gαq variants from A. gambiae (AAW50316; AgGαq5) and Diaphorina citri (XP_008479779; DcGαq1). The alignment corresponds to LhGαq1 amino acid residues 187–353. Shading denotes amino acid sequence similarity and is scaled as: 100% similarity (black), 99%–80% (dark grey), 79%–60% (light grey), and less than 59% (white); (C) Proposed alternative splice scheme utilized to generate the cloned LhGαq variants. Similar to A. gambiae and D. melanogaster, the LhGαq locus appears to have three homologous exons (B/B', C/C', and D/D') that are alternatively spliced to generate the five LhGαq variants. Putative exon-intron boundaries are based on observed sequence variations with coding sequences shown as boxes.
Percent identity matrix heat map for LhGα proteins.
| LhGαq1 | LhGαq2 | LhGαq3 | LhGαq4 | LhGαq5 | LhGαs | LhGαi | LhGαo | LhGα12 | |
|---|---|---|---|---|---|---|---|---|---|
| LhGαq1 | 100 | 93 | 96 | 89 | 72 | 42 | 49 | 48 | 44 |
| LhGαq2 | 93 | 100 | 89 | 96 | 75 | 42 | 47 | 46 | 44 |
| LhGαq3 | 96 | 89 | 100 | 93 | 78 | 42 | 50 | 48 | 45 |
| LhGαq4 | 89 | 96 | 93 | 100 | 81 | 42 | 48 | 46 | 44 |
| LhGαq5 | 72 | 75 | 78 | 81 | 100 | 39 | 47 | 47 | 43 |
| LhGαs | 42 | 42 | 42 | 42 | 39 | 100 | 41 | 42 | 35 |
| LhGαi | 49 | 47 | 50 | 48 | 47 | 41 | 100 | 67 | 38 |
| LhGαo | 48 | 46 | 48 | 46 | 47 | 42 | 67 | 100 | 39 |
| LhGα12 | 44 | 44 | 45 | 44 | 43 | 35 | 38 | 39 | 100 |
Figure 3Phylogenetic analysis of Gα subunits from L. hesperus and other insects. Phylogenetic relationships were inferred using the maximum likelihood method based on the JTT matrix-based model [68]. The tree with the highest log likelihood is shown. L. hesperus Gα sequences are shown in red.
Figure 4Multiple sequence alignment of L. hesperus Gα sequences. The respective full length L. hesperus Gα sequences were aligned in MUSCLE using default settings. Percent similarity shading is as in Figure 2. Conserved Gα subunit features/motifs are boxed: predicted myristoylation sites (purple M), predicted palmitoylation sites (orange P), diphosphate binding (red), Mg2+ binding (blue), guanine ring binding (green), putative cholera toxin-mediated ADP-ribosylation site (Arg186) in LhGαs (yellow circle), putative pertussis toxin-mediated ADP-ribosylation sites (Cys352/Cys351) in LhGαi and LhGαo (pink circle).
Figure 5End point PCR-based expression profile of L. hesperus Gα transcripts. (A) Expression profile of LhGα sequences in eggs, nymphal development (1st–5th instars), 1-day-old mixed sex adults (d1a), 10-day-old mixed sex adults (d10a), and 20-day-old mixed sex adults (d20a); (B) Expression profile of LhGα sequences in sex-specific adult tissues. Abbreviations are: M. tubule, Malpighian tubule; AG, accessory glands (lateral and medial); SD, seminal depository. In both (A) and (B), amplimers correspond to ~500-600 bp fragments of each transcript with products analyzed on 1.5% agarose gels stained with SYBR Safe. Negative images of the gels are shown for enhanced clarity of low expression transcripts. Numbers to the right of each gel image indicate the number of amplification cycles.
Figure 6Intracellular localization of transiently expressed L. hesperus Gα subunits in cultured insect cells. Fixed Trichoplusia ni (Tni) cells transfected with plasmids encoding carboxyl terminal 6×-His tagged LhGα subunits (LhGαi-His, LhGαq1-His, and LhGαs-His) or mock transfected cells (Tni) were probed with a polyclonal mouse anti-His antibody (primary) and a goat anti-mouse IgG-TRITC antibody (secondary). Red fluorescence corresponds to the TRITC signal and denotes localization of the His-tagged Gα subunits. Scale bar = 20 μm.