Literature DB >> 26457722

Sequencing and analysis of the complete mitochondrial genome of Rufous-tailed Shrike, Lanius isabellinus (Passeriformes, Laniidae).

Fangqing Liu1, Xinkang Bao1, Yanan Fan1, Jiande Li1.   

Abstract

The complete mitochondrial genome of the Rufous-tailed Shrike (Lanius isabellinus) was 16 819 bp in length. The GenBank accession number is KP995437 and the contents of A, T, C, and G are 31.1% (5234 bp), 25.5% (4293 bp), 28.7% (4826 bp), and 14.7% (2466 bp), respectively. Gene organization and length are similar to other species of birds. It comprises 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. All protein-coding genes use the typical initiation codon ATG, except for COX1 that uses GTG. All the complete stop codons were co-incident with the Black-headed Gull (Chroicocephalus ridibundus) and the Grey-backed Shrike (Lanius tephronotus), except for ND2 that was terminated with TAG. In addition, the phylogenetic relationships of Passeriformes based on complete mitochondrial genome showed that genetic distance of Laniidae and Corvidae was closer than other species.

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Keywords:  Complete mitochondrial genome; Lanius isabellinus; phylogenetic; protein-coding genes

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Year:  2015        PMID: 26457722     DOI: 10.3109/19401736.2015.1041125

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  1 in total

1.  Response of an Afro-Palearctic bird migrant to glaciation cycles.

Authors:  Kasper Thorup; Lykke Pedersen; Rute R da Fonseca; Babak Naimi; David Nogués-Bravo; Mario Krapp; Andrea Manica; Mikkel Willemoes; Sissel Sjöberg; Shaohong Feng; Guangji Chen; Alba Rey-Iglesia; Paula F Campos; Robert Beyer; Miguel B Araújo; Anders J Hansen; Guojie Zhang; Anders P Tøttrup; Carsten Rahbek
Journal:  Proc Natl Acad Sci U S A       Date:  2021-12-23       Impact factor: 11.205

  1 in total

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