Literature DB >> 26455956

Linker histone H1 and protein-protein interactions.

Anna A Kalashnikova1, Ryan A Rogge1, Jeffrey C Hansen2.   

Abstract

Linker histones H1 are ubiquitous chromatin proteins that play important roles in chromatin compaction, transcription regulation, nucleosome spacing and chromosome spacing. H1 function in DNA and chromatin structure stabilization is well studied and established. The current paradigm of linker histone mode of function considers all other cellular roles of linker histones to be a consequence from H1 chromatin compaction and repression. Here we review the multiple processes regulated by linker histones and the emerging importance of protein interactions in H1 functioning. We propose a new paradigm which explains the multi functionality of linker histones through linker histones protein interactions as a way to directly regulate recruitment of proteins to chromatin.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Chromatin; Genome; Intrinsic disorder; Nucleolus; Nucleosome; Transcription; mRNA splicing

Mesh:

Substances:

Year:  2015        PMID: 26455956      PMCID: PMC4775371          DOI: 10.1016/j.bbagrm.2015.10.004

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  91 in total

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2.  Distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin II: distribution in human adult fibroblasts.

Authors:  M H Parseghian; R L Newcomb; B A Hamkalo
Journal:  J Cell Biochem       Date:  2001       Impact factor: 4.429

3.  Mammalian linker-histone subtypes differentially affect gene expression in vivo.

Authors:  Raouf Alami; Yuhong Fan; Stephanie Pack; Timothy M Sonbuchner; Arnaud Besse; Qingcong Lin; John M Greally; Arthur I Skoultchi; Eric E Bouhassira
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-28       Impact factor: 11.205

4.  Identification of specific functional subdomains within the linker histone H10 C-terminal domain.

Authors:  Xu Lu; Jeffrey C Hansen
Journal:  J Biol Chem       Date:  2003-12-10       Impact factor: 5.157

5.  Comprehensive proteomic analysis of the human spliceosome.

Authors:  Zhaolan Zhou; Lawrence J Licklider; Steven P Gygi; Robin Reed
Journal:  Nature       Date:  2002-09-12       Impact factor: 49.962

6.  Large-scale proteomic analysis of the human spliceosome.

Authors:  Juri Rappsilber; Ursula Ryder; Angus I Lamond; Matthias Mann
Journal:  Genome Res       Date:  2002-08       Impact factor: 9.043

7.  The C-terminal domain is the primary determinant of histone H1 binding to chromatin in vivo.

Authors:  Michael J Hendzel; Melody A Lever; Ellen Crawford; John P H Th'ng
Journal:  J Biol Chem       Date:  2004-02-25       Impact factor: 5.157

8.  DNA-induced alpha-helical structure in the NH2-terminal domain of histone H1.

Authors:  R Vila; I Ponte; M Collado; J L Arrondo; M A Jiménez; M Rico; P Suau
Journal:  J Biol Chem       Date:  2001-10-02       Impact factor: 5.157

9.  MSX1 cooperates with histone H1b for inhibition of transcription and myogenesis.

Authors:  Hansol Lee; Raymond Habas; Cory Abate-Shen
Journal:  Science       Date:  2004-06-11       Impact factor: 47.728

10.  Reductions in linker histone levels are tolerated in developing spermatocytes but cause changes in specific gene expression.

Authors:  Qingcong Lin; Amy Inselman; Xing Han; Hui Xu; Weijia Zhang; Mary Ann Handel; Arthur I Skoultchi
Journal:  J Biol Chem       Date:  2004-03-23       Impact factor: 5.157

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  24 in total

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Authors:  Elisabetta Flex; Simone Martinelli; Anke Van Dijck; Andrea Ciolfi; Serena Cecchetti; Elisa Coluzzi; Luca Pannone; Cristina Andreoli; Francesca Clementina Radio; Simone Pizzi; Giovanna Carpentieri; Alessandro Bruselles; Giuseppina Catanzaro; Lucia Pedace; Evelina Miele; Elena Carcarino; Xiaoyan Ge; Chieko Chijiwa; M E Suzanne Lewis; Marije Meuwissen; Sandra Kenis; Nathalie Van der Aa; Austin Larson; Kathleen Brown; Melissa P Wasserstein; Brian G Skotko; Amber Begtrup; Richard Person; Maria Karayiorgou; J Louw Roos; Koen L Van Gassen; Marije Koopmans; Emilia K Bijlsma; Gijs W E Santen; Daniela Q C M Barge-Schaapveld; Claudia A L Ruivenkamp; Mariette J V Hoffer; Seema R Lalani; Haley Streff; William J Craigen; Brett H Graham; Annette P M van den Elzen; Daan J Kamphuis; Katrin Õunap; Karit Reinson; Sander Pajusalu; Monica H Wojcik; Clara Viberti; Cornelia Di Gaetano; Enrico Bertini; Simona Petrucci; Alessandro De Luca; Rossella Rota; Elisabetta Ferretti; Giuseppe Matullo; Bruno Dallapiccola; Antonella Sgura; Magdalena Walkiewicz; R Frank Kooy; Marco Tartaglia
Journal:  Am J Hum Genet       Date:  2019-08-22       Impact factor: 11.025

2.  A simple and versatile system for the ATP-dependent assembly of chromatin.

Authors:  Mai T Khuong; Jia Fei; Grisel Cruz-Becerra; James T Kadonaga
Journal:  J Biol Chem       Date:  2017-10-05       Impact factor: 5.157

3.  Silencing the genome with linker histones.

Authors:  Jeffrey C Hansen
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-19       Impact factor: 11.205

Review 4.  Linker histones: novel insights into structure-specific recognition of the nucleosome.

Authors:  Amber R Cutter; Jeffrey J Hayes
Journal:  Biochem Cell Biol       Date:  2016-06-29       Impact factor: 3.626

5.  Histone H1 regulates non-coding RNA turnover on chromatin in a m6A-dependent manner.

Authors:  José Miguel Fernández-Justel; Cristina Santa-María; Sara Martín-Vírgala; Shreya Ramesh; Alberto Ferrera-Lagoa; Mónica Salinas-Pena; Javier Isoler-Alcaraz; Magdalena M Maslon; Albert Jordan; Javier F Cáceres; María Gómez
Journal:  Cell Rep       Date:  2022-09-13       Impact factor: 9.995

6.  Analysis of histone variant constraint and tissue expression suggests five potential novel human disease genes: H2AFY2, H2AFZ, H2AFY, H2AFV, H1F0.

Authors:  Emily Lubin; Laura Bryant; Joseph Aicher; Dong Li; Elizabeth Bhoj
Journal:  Hum Genet       Date:  2022-01-24       Impact factor: 5.881

7.  The Dynamic Influence of Linker Histone Saturation within the Poly-Nucleosome Array.

Authors:  Dustin C Woods; Francisco Rodríguez-Ropero; Jeff Wereszczynski
Journal:  J Mol Biol       Date:  2021-03-02       Impact factor: 5.469

8.  Site-specific ubiquitylation acts as a regulator of linker histone H1.

Authors:  Eva Höllmüller; Simon Geigges; Marie L Niedermeier; Kai-Michael Kammer; Simon M Kienle; Daniel Rösner; Martin Scheffner; Andreas Marx; Florian Stengel
Journal:  Nat Commun       Date:  2021-06-09       Impact factor: 14.919

9.  H1 gets the genome in shape.

Authors:  Annalisa Izzo; Robert Schneider
Journal:  Genome Biol       Date:  2016-01-18       Impact factor: 13.583

Review 10.  The role of the DFF40/CAD endonuclease in genomic stability.

Authors:  Merve Kulbay; Nathan Bernier-Parker; Jacques Bernier
Journal:  Apoptosis       Date:  2021-01-02       Impact factor: 4.677

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