Literature DB >> 26455798

Structural Insight into Fungal Cell Wall Recognition by a CVNH Protein with a Single LysM Domain.

Leonardus M I Koharudin1, Karl T Debiec1, Angela M Gronenborn2.   

Abstract

MGG_03307 is a lectin isolated from Magnaporte oryzae, a fungus that causes devastating rice blast disease. Its function is associated with protecting M. oryzae from the host immune response in plants. To provide the structural basis of how MGG_03307 protects the fungus, crystal structures of its CVNH-LysM module were determined in the absence and presence of GlcNAc-containing cell wall chitin constituents, which can act as pathogen-associated molecular patterns. Our structures revealed that glycan binding is accompanied by a notable conformational change in the LysM domain and that GlcNAc3 and GlcNAc4 are accommodated similarly. GlcNAc5 and GlcNAc6 interact with the LysM domain in multiple conformations, as evidenced by solution nuclear magnetic resonance studies. No dimerization of MoCVNH3 via its LysM domain was observed upon binding to GlcNAc6, unlike in multiple LysM domain-containing proteins. Importantly, we define a specific consensus binding mode for the recognition of GlcNAc oligomers by single LysM domains.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Chitin; LysM domain; NMR; Protein-carbohydrate complex; X-ray crystallography

Mesh:

Substances:

Year:  2015        PMID: 26455798      PMCID: PMC4635050          DOI: 10.1016/j.str.2015.07.023

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  39 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

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Authors:  Laura G Barrientos; John M Louis; Istvan Botos; Toshiyuki Mori; Zhaozhong Han; Barry R O'Keefe; Michael R Boyd; Alexander Wlodawer; Angela M Gronenborn
Journal:  Structure       Date:  2002-05       Impact factor: 5.006

Review 3.  LysM, a widely distributed protein motif for binding to (peptido)glycans.

Authors:  Girbe Buist; Anton Steen; Jan Kok; Oscar P Kuipers
Journal:  Mol Microbiol       Date:  2008-05       Impact factor: 3.501

Review 4.  Innate immunity: impact on the adaptive immune response.

Authors:  R Medzhitov; C A Janeway
Journal:  Curr Opin Immunol       Date:  1997-02       Impact factor: 7.486

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  LysM domains from Pteris ryukyuensis chitinase-A: a stability study and characterization of the chitin-binding site.

Authors:  Takayuki Ohnuma; Shoko Onaga; Katsuyoshi Murata; Toki Taira; Etsuko Katoh
Journal:  J Biol Chem       Date:  2007-12-14       Impact factor: 5.157

7.  An intermolecular binding mechanism involving multiple LysM domains mediates carbohydrate recognition by an endopeptidase.

Authors:  Jaslyn E M M Wong; Søren Roi Midtgaard; Kira Gysel; Mikkel B Thygesen; Kasper K Sørensen; Knud J Jensen; Jens Stougaard; Søren Thirup; Mickaël Blaise
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-02-26

Review 8.  Role of LysM receptors in chitin-triggered plant innate immunity.

Authors:  Kiwamu Tanaka; Cuong T Nguyen; Yan Liang; Yangrong Cao; Gary Stacey
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9.  LysM effectors: secreted proteins supporting fungal life.

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Journal:  PLoS Pathog       Date:  2013-12-12       Impact factor: 6.823

10.  Molecular basis for bacterial peptidoglycan recognition by LysM domains.

Authors:  Stéphane Mesnage; Mariano Dellarole; Nicola J Baxter; Jean-Baptiste Rouget; Jordan D Dimitrov; Ning Wang; Yukari Fujimoto; Andrea M Hounslow; Sébastien Lacroix-Desmazes; Koichi Fukase; Simon J Foster; Michael P Williamson
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2.  Integrating NMR, SAXS, and Atomistic Simulations: Structure and Dynamics of a Two-Domain Protein.

Authors:  Karl T Debiec; Matthew J Whitley; Leonardus M I Koharudin; Lillian T Chong; Angela M Gronenborn
Journal:  Biophys J       Date:  2018-02-27       Impact factor: 4.033

Review 3.  LysM Receptor-Like Kinase and LysM Receptor-Like Protein Families: An Update on Phylogeny and Functional Characterization.

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  3 in total

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