Literature DB >> 26454113

Molecular dynamics of histone H1.

Thomas W Flanagan1, David T Brown2.   

Abstract

The H1 or linker histones bind dynamically to chromatin in living cells via a process that involves transient association with the nucleosome near the DNA entry/exit site followed by dissociation, translocation to a new location, and rebinding. The mean residency time of H1 on any given nucleosome is about a minute, which is much shorter than that of most core histones but considerably longer than that of most other chromatin-binding proteins, including transcription factors. Here we review recent advances in understanding the kinetic pathway of H1 binding and how it relates to linker histone structure and function. We also describe potential mechanisms by which the dynamic binding of H1 might contribute directly to the regulation of gene expression and discuss several situations for which there is experimental evidence to support these mechanisms. Finally, we review the evidence for the participation of linker histone chaperones in mediating H1 exchange.
Copyright © 2015 The Authors. Published by Elsevier B.V. All rights reserved.

Keywords:  Chromatin; FRAP; H1; Linker histone; Mobility; Nucleosome; Photobleaching

Mesh:

Substances:

Year:  2015        PMID: 26454113     DOI: 10.1016/j.bbagrm.2015.10.005

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  18 in total

1.  Conformational selection and dynamic adaptation upon linker histone binding to the nucleosome.

Authors:  Mehmet Ali Öztürk; Georgi V Pachov; Rebecca C Wade; Vlad Cojocaru
Journal:  Nucleic Acids Res       Date:  2016-06-07       Impact factor: 16.971

Review 2.  Significance of avian linker histone (H1) polymorphic variation.

Authors:  Andrzej Kowalski
Journal:  J Biosci       Date:  2018-09       Impact factor: 1.826

Review 3.  Post-translational modifications of the intrinsically disordered terminal domains of histone H1: effects on secondary structure and chromatin dynamics.

Authors:  A Roque; I Ponte; P Suau
Journal:  Chromosoma       Date:  2016-04-21       Impact factor: 4.316

Review 4.  Yeast HMO1: Linker Histone Reinvented.

Authors:  Arvind Panday; Anne Grove
Journal:  Microbiol Mol Biol Rev       Date:  2016-11-30       Impact factor: 11.056

Review 5.  Molecular Basis for K63-Linked Ubiquitination Processes in Double-Strand DNA Break Repair: A Focus on Kinetics and Dynamics.

Authors:  Brian L Lee; Anamika Singh; J N Mark Glover; Michael J Hendzel; Leo Spyracopoulos
Journal:  J Mol Biol       Date:  2017-06-03       Impact factor: 5.469

6.  Gene-Specific H1 Eviction through a Transcriptional Activator→p300→NAP1→H1 Pathway.

Authors:  Miho Shimada; Wei-Yi Chen; Tomoyoshi Nakadai; Takashi Onikubo; Mohamed Guermah; Daniela Rhodes; Robert G Roeder
Journal:  Mol Cell       Date:  2019-03-19       Impact factor: 17.970

Review 7.  Histone variants: The unsung guardians of the genome.

Authors:  Ernest O N Phillips; Akash Gunjan
Journal:  DNA Repair (Amst)       Date:  2022-02-17

8.  Role of Chromatin Damage and Chromatin Trapping of FACT in Mediating the Anticancer Cytotoxicity of DNA-Binding Small-Molecule Drugs.

Authors:  Elimelech Nesher; Alfiya Safina; Ieman Aljahdali; Scott Portwood; Eunice S Wang; Igor Koman; Jianmin Wang; Katerina V Gurova
Journal:  Cancer Res       Date:  2018-01-16       Impact factor: 12.701

9.  Chiari 1 malformation and exome sequencing in 51 trios: the emerging role of rare missense variants in chromatin-remodeling genes.

Authors:  Aldesia Provenzano; Andrea La Barbera; Mirko Scagnet; Angelica Pagliazzi; Giovanna Traficante; Marilena Pantaleo; Lucia Tiberi; Debora Vergani; Nehir Edibe Kurtas; Silvia Guarducci; Sara Bargiacchi; Giulia Forzano; Rosangela Artuso; Viviana Palazzo; Ada Kura; Flavio Giordano; Daniele di Feo; Marzia Mortilla; Claudio De Filippi; Gianluca Mattei; Livia Garavelli; Betti Giusti; Lorenzo Genitori; Orsetta Zuffardi; Sabrina Giglio
Journal:  Hum Genet       Date:  2020-12-18       Impact factor: 4.132

10.  Binding Dynamics of Disordered Linker Histone H1 with a Nucleosomal Particle.

Authors:  Hao Wu; Yamini Dalal; Garegin A Papoian
Journal:  J Mol Biol       Date:  2021-02-20       Impact factor: 6.151

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