Literature DB >> 26452192

Nano-QSAR: Model of mutagenicity of fullerene as a mathematical function of different conditions.

Alla P Toropova1, Andrey A Toropov2, Aleksandar M Veselinović3, Jovana B Veselinović3, Emilio Benfenati1, Danuta Leszczynska4, Jerzy Leszczynski5.   

Abstract

The experimental data on the bacterial reverse mutation test (under various conditions) on C60 nanoparticles for the cases (i) TA100, and (ii) WP2uvrA/pkM101 are examined as endpoints. By means of the optimal descriptors calculated with the Monte Carlo method a mathematical model of these endpoints has been built up. The models are a mathematical function of eclectic data such as (i) dose (g/plate); (ii) metabolic activation (i.e. with mix S9 or without mix S9); and (iii) illumination (i.e. darkness or irradiation). The eclectic data on different conditions were represented by so-called quasi-SMILES. In contrast to the traditional SMILES which are representation of molecular structure, the quasi-SMILES are representation of conditions by sequence of symbols. The calculations were carried out with the CORAL software, available on the Internet at http://www.insilico.eu/coral. The main idea of the suggested descriptors is the accumulation of all available eclectic information in the role of logical and digital basis for building up a model. The computational experiments have shown that the described approach can be a tool to build up models of mutagenicity of fullerene under different conditions.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Fullerene nanoparticle; Mutagenicity; Nano-QSAR; Quasi-SMILES

Mesh:

Substances:

Year:  2015        PMID: 26452192     DOI: 10.1016/j.ecoenv.2015.09.038

Source DB:  PubMed          Journal:  Ecotoxicol Environ Saf        ISSN: 0147-6513            Impact factor:   6.291


  7 in total

1.  NanoEHS beyond Toxicity - Focusing on Biocorona.

Authors:  Sijie Lin; Monika Mortimer; Ran Chen; Aleksandr Kakinen; Jim E Riviere; Thomas P Davis; Feng Ding; Pu Chun Ke
Journal:  Environ Sci Nano       Date:  2017-06-01

2.  Evaluating the cytotoxicity of a large pool of metal oxide nanoparticles to Escherichia coli: Mechanistic understanding through In Vitro and In Silico studies.

Authors:  Supratik Kar; Kavitha Pathakoti; Paul B Tchounwou; Danuta Leszczynska; Jerzy Leszczynski
Journal:  Chemosphere       Date:  2020-09-25       Impact factor: 7.086

3.  Decrypting Strong and Weak Single-Walled Carbon Nanotubes Interactions with Mitochondrial Voltage-Dependent Anion Channels Using Molecular Docking and Perturbation Theory.

Authors:  Michael González-Durruthy; Adriano V Werhli; Vinicius Seus; Karina S Machado; Alejandro Pazos; Cristian R Munteanu; Humberto González-Díaz; José M Monserrat
Journal:  Sci Rep       Date:  2017-10-16       Impact factor: 4.379

4.  New Mechanistic Insights on Carbon Nanotubes' Nanotoxicity Using Isolated Submitochondrial Particles, Molecular Docking, and Nano-QSTR Approaches.

Authors:  Michael González-Durruthy; Riccardo Concu; Juan M Ruso; M Natália D S Cordeiro
Journal:  Biology (Basel)       Date:  2021-02-25

5.  Ecotoxicological prediction of organic chemicals toward Pseudokirchneriella subcapitata by Monte Carlo approach.

Authors:  Shahram Lotfi; Shahin Ahmadi; Parvin Kumar
Journal:  RSC Adv       Date:  2022-09-01       Impact factor: 4.036

Review 6.  QSPR/QSAR: State-of-Art, Weirdness, the Future.

Authors:  Andrey A Toropov; Alla P Toropova
Journal:  Molecules       Date:  2020-03-12       Impact factor: 4.411

Review 7.  Nano-(Q)SAR for Cytotoxicity Prediction of Engineered Nanomaterials.

Authors:  Andrey A Buglak; Anatoly V Zherdev; Boris B Dzantiev
Journal:  Molecules       Date:  2019-12-11       Impact factor: 4.411

  7 in total

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