Literature DB >> 26432580

Mechanistic Study on Electronic Excitation Dissociation of the Cellobiose-Na(+) Complex.

Yiqun Huang1,2, Yi Pu1,3, Xiang Yu1,2, Catherine E Costello1,2,3, Cheng Lin4,5.   

Abstract

The recent development of electron activated dissociation (ExD) techniques has opened the door for high-throughput, detailed glycan structural elucidation. Among them, ExD methods employing higher-energy electrons offer several advantages over low-energy electron capture dissociation (ECD), owing to their applicability towards chromophore-labeled glycans and singly charged ions, and ability to provide more extensive structural information. However, a lack of understanding of these processes has hindered rational optimization of the experimental conditions for more efficient fragmentation as well as the development of informatics tools for interpretation of the complex glycan ExD spectra. Here, cellobiose-Na(+) was used as the model system to investigate the fragmentation behavior of metal-adducted glycans under irradiation of electrons with energy exceeding their ionization potential, and served as the basis on which a novel electronic excitation dissociation (EED) mechanism was proposed. It was found that ionization of the glycan produces a mixture of radical cations and ring-opened distonic ions. These distonic ions then capture a low-energy electron to produce diradicals with trivial singlet-triplet splitting, and subsequently undergo radical-induced dissociation to produce a variety of fragment ions, the abundances of which are influenced by the stability of the distonic ions from which they originate. Graphical Abstract ᅟ.

Entities:  

Keywords:  Density functional theory; Electronic excitation dissociation (EED); FTICR; Fragmentation mechanism; Molecular dynamics simulation; Oligosaccharides; Tandem mass spectrometry

Mesh:

Substances:

Year:  2015        PMID: 26432580      PMCID: PMC4724539          DOI: 10.1007/s13361-015-1277-9

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  19 in total

1.  Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry.

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Review 2.  The role of electron capture dissociation in biomolecular analysis.

Authors:  Helen J Cooper; Kristina Håkansson; Alan G Marshall
Journal:  Mass Spectrom Rev       Date:  2005 Mar-Apr       Impact factor: 10.946

3.  Electron transfer dissociation of milk oligosaccharides.

Authors:  Liang Han; Catherine E Costello
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4.  Electron detachment dissociation of neutral and sialylated oligosaccharides.

Authors:  Julie T Adamson; Kristina Håkansson
Journal:  J Am Soc Mass Spectrom       Date:  2007-09-14       Impact factor: 3.109

5.  Electron ionization dissociation of singly and multiply charged peptides.

Authors:  Y M Eva Fung; Christopher M Adams; Roman A Zubarev
Journal:  J Am Chem Soc       Date:  2009-07-29       Impact factor: 15.419

6.  Mechanistic study on electron capture dissociation of the oligosaccharide-Mg²⁺ complex.

Authors:  Yiqun Huang; Yi Pu; Xiang Yu; Catherine E Costello; Cheng Lin
Journal:  J Am Soc Mass Spectrom       Date:  2014-05-21       Impact factor: 3.109

7.  Electron capture dissociation of oligosaccharides ionized with alkali, alkaline Earth, and transition metals.

Authors:  Julie T Adamson; Kristina Håkansson
Journal:  Anal Chem       Date:  2007-03-01       Impact factor: 6.986

8.  Electron detachment dissociation of glycosaminoglycan tetrasaccharides.

Authors:  Jeremy J Wolff; I Jonathan Amster; Lianli Chi; Robert J Linhardt
Journal:  J Am Soc Mass Spectrom       Date:  2006-10-30       Impact factor: 3.109

9.  Energy-dependent electron activated dissociation of metal-adducted permethylated oligosaccharides.

Authors:  Xiang Yu; Yiqun Huang; Cheng Lin; Catherine E Costello
Journal:  Anal Chem       Date:  2012-08-20       Impact factor: 6.986

10.  Detailed glycan structural characterization by electronic excitation dissociation.

Authors:  Xiang Yu; Yan Jiang; Yajie Chen; Yiqun Huang; Catherine E Costello; Cheng Lin
Journal:  Anal Chem       Date:  2013-10-09       Impact factor: 6.986

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  10 in total

1.  Characterization of Isomeric Glycans by Reversed Phase Liquid Chromatography-Electronic Excitation Dissociation Tandem Mass Spectrometry.

Authors:  Yang Tang; Juan Wei; Catherine E Costello; Cheng Lin
Journal:  J Am Soc Mass Spectrom       Date:  2018-04-13       Impact factor: 3.109

2.  Cationized Carbohydrate Gas-Phase Fragmentation Chemistry.

Authors:  Benjamin J Bythell; Maha T Abutokaikah; Ashley R Wagoner; Shanshan Guan; Jordan M Rabus
Journal:  J Am Soc Mass Spectrom       Date:  2016-11-28       Impact factor: 3.109

3.  GlycoDeNovo - an Efficient Algorithm for Accurate de novo Glycan Topology Reconstruction from Tandem Mass Spectra.

Authors:  Pengyu Hong; Hui Sun; Long Sha; Yi Pu; Kshitij Khatri; Xiang Yu; Yang Tang; Cheng Lin
Journal:  J Am Soc Mass Spectrom       Date:  2017-08-07       Impact factor: 3.109

4.  Development of Novel Free Radical Initiated Peptide Sequencing Reagent: Application to Identification and Characterization of Peptides by Mass Spectrometry.

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Journal:  J Am Soc Mass Spectrom       Date:  2018-12-13       Impact factor: 3.109

Review 5.  Mass Spectrometry-Based Techniques to Elucidate the Sugar Code.

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Journal:  Chem Rev       Date:  2021-09-07       Impact factor: 72.087

6.  Free-Radical-Mediated Glycan Isomer Differentiation.

Authors:  Rayan Murtada; Kimberly Fabijanczuk; Kaylee Gaspar; Xueming Dong; Kawthar Zeyad Alzarieni; Kimberly Calix; Edgar Manriquez; Rose Mery Bakestani; Hilkka I Kenttämaa; Jinshan Gao
Journal:  Anal Chem       Date:  2020-09-28       Impact factor: 6.986

7.  Toward Automatic and Comprehensive Glycan Characterization by Online PGC-LC-EED MS/MS.

Authors:  Juan Wei; Yang Tang; Yu Bai; Joseph Zaia; Catherine E Costello; Pengyu Hong; Cheng Lin
Journal:  Anal Chem       Date:  2019-12-24       Impact factor: 6.986

8.  Fragmentation Pathways of Lithiated Hexose Monosaccharides.

Authors:  Maha T Abutokaikah; Joseph W Frye; John Tschampel; Jordan M Rabus; Benjamin J Bythell
Journal:  J Am Soc Mass Spectrom       Date:  2018-05-08       Impact factor: 3.109

9.  Eradicating mass spectrometric glycan rearrangement by utilizing free radicals.

Authors:  Nikunj Desai; Daniel A Thomas; Jungeun Lee; Jinshan Gao; J L Beauchamp
Journal:  Chem Sci       Date:  2016-05-05       Impact factor: 9.825

10.  Charge transfer dissociation of a branched glycan with alkali and alkaline earth metal adducts.

Authors:  Zachary J Sasiene; David Ropartz; Hélène Rogniaux; Glen P Jackson
Journal:  J Mass Spectrom       Date:  2021-07       Impact factor: 2.394

  10 in total

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