| Literature DB >> 26427365 |
Stephanie Bjerrum1,2, Ernest Kenu3, Margaret Lartey4,5, Mercy Jemina Newman6, Kennedy Kwasi Addo7, Aase Bengaard Andersen8, Isik Somuncu Johansen9.
Abstract
BACKGROUND: Rapid diagnostic tests are urgently needed to mitigate HIV-associated tuberculosis (TB) mortality. We evaluated diagnostic accuracy of the rapid urine lipoarabinomannan (LAM) test for pulmonary TB and assessed the effect of a two-sample strategy.Entities:
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Year: 2015 PMID: 26427365 PMCID: PMC4591579 DOI: 10.1186/s12879-015-1151-1
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Fig. 1Flowchart of study participants and analysis. *Of 29 participants excluded; three (3) were on antituberculous treatment; twenty one (21) had no sputum samples; and five (5) had no urine sample. The remaining 469 participants were eligible for analysis with at least 1 sputum and 1 urine sample available
Characteristics of study population
| All | Confirmed TB | Possible TB | Non-TB | |
|---|---|---|---|---|
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|
|
| |
| Enrolment site | ||||
| Out patients | 399 (85 %) | 40 (73 %) | 20 (44 %) | 339 (92 %) |
| In patients | 70 (15 %) | 15 (27 %) | 25 (56 %) | 30 (8 %) |
| Median Age in years (IQR) | 38 (31–45) | 37 (29–44) | 37 (33–41) | 38 (32–45) |
| Female | 301 (64 %) | 24 (44 %) | 29 (64 %) | 241 (65 %) |
| Median CD4 (IQR)* | 127 (35–256) | 92 (41–176) | 46 (12–176) | 142 (41–282) |
| CD4 < 100 | 195 (43 %) | 29 (55 %) | 28 (65 %) | 138 (39 %) |
| CD4 > =100 | 259 (57 %) | 24 (45 %) | 15 (35 %) | 220 (61 %) |
| Mean MEWS (SD) | 3 (1.95) | 5 (2.20) | 4 (2.37) | 3 (1.59) |
| MEWS > 4 | 101 (22 %) | 35 (63 %) | 19 (42 %) | 47 (13 %) |
| MEWS < = 4 | 368 (78 %) | 20 (36 %) | 26 (58 %) | 322 (87 %) |
| Median HGB g/dl** (IQR) | 9.7 (8.1-11.2) | 8.2 (6.2-9.6) | 8.0 (6–10) | 10 (9–12) |
| Median BMI (IQR) | 20 (18–22) | 18 (16–19) | 19 (16–21) | 21 (18–23) |
| TB suspects, WHO symptom screen | 426 (91 %) | 53 (96 %) | 43 (96 %) | 330 (90 %) |
| Current Cough | 222 (48) | 42 (76 %) | 28 (62 %) | 152 (41 %) |
| Fever | 238 (52 %) | 45 (82 %) | 28 (62 %) | 165 (45 %) |
| Weight loss | 390 (83 %) | 51 (93 %) | 39 (87 %) | 300 (81 %) |
| Night Sweats | 161 (34 %) | 26 (49 %) | 16 (36 %) | 119 (32 %) |
| Previous history of TB | 28 (6 %) | 4 (7 %) | 2 (4 %) | 22 (6 %) |
| Overall mortality*** | 81 (17 %) | 18 (33 %) | 23 (51 %) | 40 (11 %) |
*CD4 count missing for 15 participants
**HGB missing for 39 participants
***80 participants were lost to follow-up at 6 months and 11 transferred out
IQR = Interquartile range, SD = Standard Deviation
Overall performance of LAM test for diagnosis of tuberculosis
| Total | Sensitivity | Specificity | LR (+) | LR (−) | PPV | NPV | |||
|---|---|---|---|---|---|---|---|---|---|
| N | % (95 % CI) | N | % (95 % CI) | (95 % CI) | (95 % CI) | % (95 % CI) | % (95 % CI) | ||
| LAM test overall | |||||||||
| Microbiological reference standard* | 469 | 24/55 | 44 (30–58) | 393/414 | 95 (92–97) | 8.6 (5.1-14.4) | 0.6 (0.5-0.8) | 53 (38–68) | 93 (90–95) |
| Composite reference standard** | 469 | 36/100 | 36 (27–46) | 360/369 | 98 (95–99) | 14.8 (7.4-29.6) | 0.7 (0.6-0.8) | 80 (65–90) | 85 (81–88) |
*Primary analysis using a microbiological reference standard:” Confirmed TB” cases versus culture and Xpert negative cases
**Secondary analysis using a composite reference standard: “Confirmed TB” and “Possible TB” combined for calculations of sensitivity versus “Non TB”
LR (+) = Positive Likelihood Ratio, LR (−) = Negative Likelihood Ratio, PPV = Positive Predictive Value, NPV = Negative Predictive Value
The overall sensitivity and specificity of the LAM test and stratified by subpopulation
| LAM test overall | Total | Microbiological reference standard | Composite reference standard | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sensitivity | Specificity | Sensitivity | Specificity | ||||||||||||
| N | % (95 % CI) |
| N | % (95 % CI) |
| N | % (95 % CI) |
| N | % (95 % CI) |
| ||||
| 469 | 24/55 | 44 (30–58) | 393/414 | 95 (92–97) | 36/100 | 36 (27–46) | 360/369 | 98 (95–99) | |||||||
| By Department | 469 | ||||||||||||||
| Inpatient | 70 | 10/15 | 67 (38–88) | 47/55 | 86 (73–94) | 17/40 | 43 (27–59) | 29/30 | 97 (83–100) | ||||||
| Out patient | 399 | 14/40 | 35 (21–52) |
| 346/359 | 96 (94–98) |
| 19/60 | 32 (20–45) | 0.269 | 331/339 | 98 (95–99) | 0.74 | ||
| By CD4 strata* | 454 | ||||||||||||||
| CD4 < 100 | 195 | 14/29 | 48 (29–68) | 148/166 | 89 (83–93) | 24/57 | 42 (29–56) | 130/138 | 94 (89–98) | ||||||
| CD4 > = 100 | 259 | 8/24 | 33 (16–55) | 0.272 | 233/235 | 99 (97–100) |
| 9/39 | 23 (11–39) | 0.054 | 219/220 | 100 (98–100) |
| ||
| By MEWS | 469 | ||||||||||||||
| MEWS > 4 | 101 | 20/35 | 57 (39–74) | 54/66 | 82 (70–90) | 29/54 | 54 (40–67) | 44/47 | 94 (83–99) | ||||||
| MEWS < = 4 | 368 | 4/20 | 20 (6–44) |
| 339/348 | 97 (95–99) |
| 7/46 | 15 (6–29) |
| 316/322 | 98 (96–99) | 0.061 | ||
| By Vital status at 60 days** | 397 | ||||||||||||||
| Dead | 52 | 10/14 | 71 (42–92) | 33/38 | 87 (72–96) | 14/29 | 48 (29–68) | 22/23 | 96 (78–100) | ||||||
| Alive | 345 | 11/34 | 32 (17–51) |
| 302/311 | 97 (95–99) |
| 14/58 | 24 (14–37) |
| 281/287 | 98 (96–99) | 0.483 | ||
*15 participants with missing values for CD4 were excluded from analysis
**63 participants were lost to follow-up at 2 months and 7 transferred out
MEWS = Modified Early Warning Score
Sensitivity and specificity of the LAM test, sputum smear microscopy and combinations of the tests
| Total | Sensitivity | Specificity | LR (+) | LR (−) | PPV | NPV | |||
|---|---|---|---|---|---|---|---|---|---|
| N | % (95 % CI) | N | % (95 % CI) | % (95 % CI) | % (95 % CI) | % (95 % CI) | % (95 % CI) | ||
| LAM test | 469 | 24/55 | 44 (30–58) | 393/414 | 95 (92–97) | 8.6 (5.1-14.4) | 0.6 (0.5-0.8) | 53 (38–68) | 93 (90–95) |
| ZN microscopy | 467 | 29/55 | 53 (39–66) | 406/412a | 99 (97–100) | 36.2 (15.7-83.3) | 0.5 (0.4-0.6) | 83 (66–93) | 94 (91–96) |
| ZN + Fluorescence microscopy | 467 | 31/55 | 56 (42–70) | 406/412a | 99 (97–100) | 38.7 (16.9-88.5) | 0.4 (0.3-0.6) | 84 (68–94) | 94 (92–96) |
| LAM + ZN microscopy | 469 | 34/55 | 62 (48–75)a | 388/414 | 94 (90–96)a,b | 9.8 (6.4-15.1) | 0.4 (0.3-06) | 57 (43–69) | 95 (92–97) |
| LAM + ZN + Fluorescence Microscopy | 469 | 35/55 | 64 (50–76)a | 388/414 | 94 (91–96)a,c | 10.1 (6.6-15.5) | 0.4 (0.3-0.6) | 57 (44–70) | 95 (93–97) |
For combinations of test a positive result was recorded if any of the tests were positive
a p < 0.05 for comparison with LAM test alone
b p < 0.05 for comparison with ZN microscopy alone
c p < 0.05 for comparison with ZN + Fluorescence microscopy
LR (+) = Positive Likelihood Ratio, LR (−) = Negative Likelihood Ratio, PPV = Positive Predictive Value, NPV = Negative Predictive Value, ZN = Ziehl Neelsen
Fig. 2Cumulative probability of survival. a Shown for the full study population (n = 469) by LAM test status. b Shown for confirmed TB cases (n = 55) by LAM test status