| Literature DB >> 26425688 |
Daniela Kandioler1, Martina Mittlböck2, Sonja Kappel3, Harald Puhalla1, Friedrich Herbst4, Cord Langner5, Brigitte Wolf3, Jörg Tschmelitsch6, Walter Schippinger7, Günther Steger8, Friedrich Hofbauer9, Hellmut Samonigg10, Michael Gnant1, Bela Teleky1, Irene Kührer8.
Abstract
We investigated the hypothesis that the varying treatment efficacy of adjuvant 5-fluorouracil (5FU) in stage III colon cancer is linked to the TP53 mutational status. ABCSG-90 was a prospective randomized trial in which effect of adjuvant 5FU was studied in stage III colon cancer patients. Tumor material of 70% of these patients (389/572) was available for analysis of the biomarker TP53 using a TP53-gene-specific Sanger sequencing protocol. Median follow-up was 88 months. TP53 mutation frequency was 33%. A significant interaction between TP53 status, outcomes and nodal category was found (P = 0.0095). In the N1 category, TP53 wildtype patients had significantly better overall survival than TP53 mutated (81.0% vs. 62.0% overall survival at 5 years; HR = 2.131; 95% CI: 1.344-3.378; P = 0.0010). In the N2 category, the TP53 status did not affect survival (P = 0.4992). In TP53 wildtype patients, the prognostic significance of N category was significantly enhanced (P = 0.0002). In TP53 mutated patients, survival curves of N1 and N2 patients overlapped and nodal category was no longer prognostic. The biomarker TP53 independently predicted effect of adjuvant 5FU in N1 colon cancer patients. TP53 was not predictive in N2 patients, in whom 5FU is known to have no effect.Entities:
Keywords: 5FU, 5-fluorouracil; ABCSG, Austrian Breast and Colorectal Cancer Study Group; Adjuvant 5-fluorouracil; CI, confidence intervals; FFPE, formalin-fixed paraffin-embedded; HR, hazard ratios; INF, interferon; LEV, levamisole; Predictive biomarker; Stage III colon cancer; TP53; Varying treatment efficacy
Mesh:
Substances:
Year: 2015 PMID: 26425688 PMCID: PMC4563117 DOI: 10.1016/j.ebiom.2015.06.003
Source DB: PubMed Journal: EBioMedicine ISSN: 2352-3964 Impact factor: 8.143
TP53 mutations.
| Type of | Nr. of patients with that mutation | Exon |
|---|---|---|
| c.102dupC p.(Pro36fs) | 1 | 4 |
| c.216dupC p.(Val73fs) | 1 | 4 |
| c.326T>C p.(Phe109Ser) | 1 | 4 |
| c.332T>G p.(Leu111Arg) | 1 | 4 |
| c.338T>G p.(Phe113Cys) | 1 | 4 |
| c.341T>A p.(Leu114Ter) | 1 | 4 |
| c.375G>A p.? | 1 | 4 |
| c.380C>T p.(Ser127Phe) | 1 | 5 |
| c.402T>A p.(Phe134Leu) | 1 | 5 |
| c.404G>T p.(Cys135Phe) | 1 | 5 |
| c.405C>G p.(Cys135Trp) | 1 | 5 |
| c.406C>T p.(Gln136Ter) | 1 | 5 |
| c.413C>T p.(Ala138Val) | 1 | 5 |
| c.452C>A p.(Pro151His) | 1 | 5 |
| c.454_466del p.(Pro152fs) | 1 | 5 |
| c.455C>T p.(Pro152Leu) | 1 | 5 |
| c.470T>G p.(Val157Gly) | 1 | 5 |
| c.475G>C p.(Ala159Pro) | 1 | 5 |
| c.485T>G p.(Ile162Ser) | 1 | 5 |
| c.493C>T p.(Gln165Ter) | 1 | 5 |
| c.514_524del p.(Val172fs) | 1 | 5 |
| c.517G>A p.(Val173Met) | 1 | 5 |
| c.524G>A p.(Arg175His) | 10 | 5 |
| c.527G>T p.(Cys176Phe) | 1 | 5 |
| c.536A>C p.(His179Pro) | 1 | 5 |
| c.553delA p.(Ser185fs) | 1 | 5 |
| c.559 + 1G>T p.? | 1 | Intron 5 |
| c.571_573delCCT p.(Pro191del) | 1 | 6 |
| c.576_577delinsCA p.[(Gln192His(;)His193Asn)] | 1 | 6 |
| c.578A>G p.(His193Arg) | 1 | 6 |
| c.578A>T p.(His193Leu) | 1 | 6 |
| c.580C>T p.(Leu194Phe) | 1 | 6 |
| c.583A>T p.(Ile195Phe) | 1 | 6 |
| c.586C>T p.(Arg196Ter) | 1 | 6 |
| c.612_613insA p.(Tyr205fs) | 1 | 6 |
| c.626_627delGA p.(Arg209fs) | 1 | 6 |
| c.637C>T p.(Arg213Ter) | 9 | 6 |
| c.638G>A p.(Arg213Gln) | 1 | 6 |
| c.641A>G p.(His214Arg) | 1 | 6 |
| c.646G>A p.(Val216Met) | 1 | 6 |
| c.650_658del p.(Val217_Tyr220delinsAsp) | 1 | 6 |
| c.672 + 1G>C p.? | 1 | Intron 6 |
| c.672 + 1G>T p.? | 1 | Intron 6 |
| c.700T>G p.(Tyr234Asp) | 1 | 7 |
| c.701A>G p.(Tyr234Cys) | 1 | 7 |
| c.706T>G p.(Tyr236Asp) | 1 | 7 |
| c.707A>C p.(Tyr236Ser) | 1 | 7 |
| c.711G>T p.(Met237Ile) | 1 | 7 |
| c.712T>C p.(Cys238Arg) | 1 | 7 |
| c.713G>A p.(Cys238Tyr) | 1 | 7 |
| c.716A>G p.(Asn239Ser) | 1 | 7 |
| c.723delC p.(Cys242fs) | 1 | 7 |
| c.726C>T p.? | 2 | 7 |
| c.733G>A p.(Gly245Ser) | 2 | 7 |
| c.737T>C p.(Met246Thr) | 1 | 7 |
| c.742C>T p.(Arg248Trp) | 3 | 7 |
| c.743G>A p.(Arg248Gln) | 5 | 7 |
| c.746G>T p.(Arg249Met) | 2 | 7 |
| c.747G>T p.(Arg249Ser) | 1 | 7 |
| c.750delC p.(251Ilefs) | 1 | 7 |
| c.770T>C p.(Leu257Pro) | 1 | 7 |
| c.772G>A p.(Glu258Lys) | 1 | 7 |
| c.773A>G p.(Glu258Gly) | 1 | 7 |
| c.782_782 + 1delGG p.? | 1 | 7 |
| c.794T>C p.(Leu265Pro) | 1 | 8 |
| c.799C>A p.? | 1 | 8 |
| c.800G>A p.(Arg267Gln) | 2 | 8 |
| c.809T>C p.(Phe270Ser) | 1 | 8 |
| c.811G>A p.(Glu271Lys) | 1 | 8 |
| c.814G>A p.(Val272Met) | 3 | 8 |
| c.814G>C p.(Val272Leu) | 1 | 8 |
| c.817C>T p.(Arg273Cys) | 3 | 8 |
| c.818G>A p.(Arg273His) | 7 | 8 |
| c.824G>A p.(Cys275Tyr) | 1 | 8 |
| c.832C>T p.(Pro278Ser) | 1 | 8 |
| c.833C>T p.(Pro278Leu) | 1 | 8 |
| c.844C>T p.(Arg282Trp) | 3 | 8 |
| c.851_852delCA p.(Thr284fs) | 1 | 8 |
| c.856G>A p.(Glu286Lys) | 1 | 8 |
| c.880delG p.(Glu294fs) | 1 | 8 |
| c.892G>T p.(Glu298Ter) | 1 | 8 |
| c.916C>T p.(Arg306Ter) | 6 | 8 |
| c.920-2A>G p.? | 1 | Intron 8 |
| c.920-7_923delTTCCTAGCACT p.? | 1 | 9/Intron 8 |
| c.1009C>T p.(Arg337Cys) | 1 | 10 |
| c.1024C>T p.(Arg342Ter) | 1 | 10 |
| c.1025_1041dup17 p.(Leu348fs) | 1 | 10 |
| c.1027G>A p.(Glu343Lys) | 1 | 10 |
| c.1045G>T p.(Glu349Ter) | 1 | 10 |
| c.274C>T p.(Pro92Ser) | 1 | 4 |
| c.548C>T p.(Ser183Leu) | 1 | 5 |
| c.629A>G p.(Asn210Ser) | 1 | 6 |
| c.277C>T p.(=) | 1 | 4 |
| c.291C>T p.(=) | 1 | 4 |
| c.525C>A p.(=) | 1 | 5 |
| c.624C>T p.(=) | 1 | 6 |
| c.699C>T p.(=) | 1 | 7 |
| c.717C>T p.(=) | 1 | 7 |
| c.1014C>T p.(=) | 1 | 10 |
| c.1023C>T p.(=) | 1 | 10 |
| c.1098C>T p.(=) | 1 | 10 |
Mutations are reported according to Recommendations of the Human Genome Variation Society (www.hgvs.org).
Mutations were considered and calculated as wildtype due to transactivation activity > 75%.
Mutations were considered and calculated as wildtype as they were characterized as silent mutations without affecting transcription, splicing or translation.
Prognostic covariates.
| Cohorts: | Study cohort | P-value | ||
|---|---|---|---|---|
| Stage IIIA | 32 | 23 (71.9%) | 9 (28.1%) | 0.445 |
| Stage IIIB | 191 | 120 (62.8%) | 71 (37.2%) | |
| Stage IIIC | 166 | 117 (70.5%) | 49 (29.5%) | |
| N1 (1-3) | 223 | 143 (64.1%) | 80 (35.9%) | 0.1878 |
| N2 (≥ 4) | 166 | 117 (70.5%) | 49 (29.5%) | |
| Female | 190 | 132 (69.5%) | 58 (30.5%) | 0.2806 |
| Male | 199 | 128 (64.3%) | 71 (35.7%) | |
| age | 63.3 | 62.1 (20.2–79.1) | 65.1 (32.8–79.2) | 0.0062 |
| G1-G2 | 262 | 169 (64.5%) | 93 (35.5%) | 0.1751 |
| G3 | 126 | 90 (71.4%) | 36 (28.6%) | |
| Proximal | 190 | 135 (71.1%) | 55 (28.9%) | 0.0845 |
| Distal | 199 | 125 (62.8%) | 74 (37.2%) | |
| 5FU | 94 | 57 (60.6%) | 37 (39.4%) | 0.1482 |
| 5FU/interferon | 102 | 76 (74.5%) | 26 (25.5%) | |
| 5FU/levamisol | 91 | 63 (69.2%) | 28 (30.8%) | |
| 5FU/interferon/levamisol | 102 | 64 (62.7%) | 38 (37.3%) | |
Age is given as median (minimum–maximum), other categorical variables are described with absolute frequencies and percentages.
Fig. 1(A,B): Kaplan–Maier estimates of cumultative survival by TP53 status (A) in N1 patients (B) in N2 patients.
Fig. 2Kaplan–Maier estimates of cumultative survival of N1 patients versus N2 patients.
Fig. 3(A,B): Kaplan–Maier estimates of cumultative survival by lymphnode category (A) in TP53 wildtype patients (B) in TP53 mutant patients.