Literature DB >> 26413200

Random Forest Classification of Depression Status Based On Subcortical Brain Morphometry Following Electroconvulsive Therapy.

Benjamin S C Wade1, Shantanu H Joshi2, Tara Pirnia2, Amber M Leaver2, Roger P Woods3, Paul M Thompson4, Randall Espinoza5, Katherine L Narr3.   

Abstract

Disorders of the central nervous system are often accompanied by brain abnormalities detectable with MRI. Advances in biomedical imaging and pattern detection algorithms have led to classification methods that may help diagnose and track the progression of a brain disorder and/or predict successful response to treatment. These classification systems often use high-dimensional signals or images, and must handle the computational challenges of high dimensionality as well as complex data types such as shape descriptors. Here, we used shape information from subcortical structures to test a recently developed feature-selection method based on regularized random forests to 1) classify depressed subjects versus controls, and 2) patients before and after treatment with electroconvulsive therapy. We subsequently compared the classification performance of high-dimensional shape features with traditional volumetric measures. Shape-based models outperformed simple volumetric predictors in several cases, highlighting their utility as potential automated alternatives for establishing diagnosis and predicting treatment response.

Entities:  

Keywords:  Random forest; classification; electroconvulsive therapy; feature selection; major depressive disorder; regularization; shape analysis

Year:  2015        PMID: 26413200      PMCID: PMC4578162          DOI: 10.1109/ISBI.2015.7163824

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  18 in total

1.  Cross-national epidemiology of major depression and bipolar disorder.

Authors:  M M Weissman; R C Bland; G J Canino; C Faravelli; S Greenwald; H G Hwu; P R Joyce; E G Karam; C K Lee; J Lellouch; J P Lépine; S C Newman; M Rubio-Stipec; J E Wells; P J Wickramaratne; H Wittchen; E K Yeh
Journal:  JAMA       Date:  1996 Jul 24-31       Impact factor: 56.272

2.  Brain morphometry with multiecho MPRAGE.

Authors:  André J W van der Kouwe; Thomas Benner; David H Salat; Bruce Fischl
Journal:  Neuroimage       Date:  2008-02-01       Impact factor: 6.556

3.  Conformal slit mapping and its applications to brain surface parameterization.

Authors:  Yalin Wang; Xianfeng Gu; Tony F Chan; Paul M Thompson; Shing-Tung Yau
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

Review 4.  Imaging insights into basal ganglia function, Parkinson's disease, and dystonia.

Authors:  A Jon Stoessl; Stephane Lehericy; Antonio P Strafella
Journal:  Lancet       Date:  2014-06-18       Impact factor: 79.321

Review 5.  Huntington disease: natural history, biomarkers and prospects for therapeutics.

Authors:  Christopher A Ross; Elizabeth H Aylward; Edward J Wild; Douglas R Langbehn; Jeffrey D Long; John H Warner; Rachael I Scahill; Blair R Leavitt; Julie C Stout; Jane S Paulsen; Ralf Reilmann; Paul G Unschuld; Alice Wexler; Russell L Margolis; Sarah J Tabrizi
Journal:  Nat Rev Neurol       Date:  2014-03-11       Impact factor: 42.937

6.  Automatic classification of patients with Alzheimer's disease from structural MRI: a comparison of ten methods using the ADNI database.

Authors:  Rémi Cuingnet; Emilie Gerardin; Jérôme Tessieras; Guillaume Auzias; Stéphane Lehéricy; Marie-Odile Habert; Marie Chupin; Habib Benali; Olivier Colliot
Journal:  Neuroimage       Date:  2010-06-11       Impact factor: 6.556

7.  Automated 3D mapping of baseline and 12-month associations between three verbal memory measures and hippocampal atrophy in 490 ADNI subjects.

Authors:  Liana G Apostolova; Jonathan H Morra; Amity E Green; Kristy S Hwang; Christina Avedissian; Ellen Woo; Jeffrey L Cummings; Arthur W Toga; Clifford R Jack; Michael W Weiner; Paul M Thompson
Journal:  Neuroimage       Date:  2010-01-18       Impact factor: 6.556

8.  The epidemiology of major depressive disorder: results from the National Comorbidity Survey Replication (NCS-R).

Authors:  Ronald C Kessler; Patricia Berglund; Olga Demler; Robert Jin; Doreen Koretz; Kathleen R Merikangas; A John Rush; Ellen E Walters; Philip S Wang
Journal:  JAMA       Date:  2003-06-18       Impact factor: 56.272

9.  Volumetric navigators for prospective motion correction and selective reacquisition in neuroanatomical MRI.

Authors:  M Dylan Tisdall; Aaron T Hess; Martin Reuter; Ernesta M Meintjes; Bruce Fischl; André J W van der Kouwe
Journal:  Magn Reson Med       Date:  2011-12-28       Impact factor: 4.668

10.  Widespread reductions in gray matter volume in depression.

Authors:  Stuart M Grieve; Mayuresh S Korgaonkar; Stephen H Koslow; Evian Gordon; Leanne M Williams
Journal:  Neuroimage Clin       Date:  2013-09-06       Impact factor: 4.881

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  6 in total

1.  Resting-state neural signal variability in women with depressive disorders.

Authors:  Sally Pessin; Erin C Walsh; Roxanne M Hoks; Rasmus M Birn; Heather C Abercrombie; Carissa L Philippi
Journal:  Behav Brain Res       Date:  2022-07-08       Impact factor: 3.352

2.  Landmark detection in 2D bioimages for geometric morphometrics: a multi-resolution tree-based approach.

Authors:  Rémy Vandaele; Jessica Aceto; Marc Muller; Frédérique Péronnet; Vincent Debat; Ching-Wei Wang; Cheng-Ta Huang; Sébastien Jodogne; Philippe Martinive; Pierre Geurts; Raphaël Marée
Journal:  Sci Rep       Date:  2018-01-11       Impact factor: 4.379

3.  Striatal shape alteration as a staging biomarker for Parkinson's Disease.

Authors:  Maxime Peralta; John S H Baxter; Ali R Khan; Claire Haegelen; Pierre Jannin
Journal:  Neuroimage Clin       Date:  2020-05-19       Impact factor: 4.881

4.  Individualized treatment response prediction of dialectical behavior therapy for borderline personality disorder using multimodal magnetic resonance imaging.

Authors:  Mike M Schmitgen; Inga Niedtfeld; Ruth Schmitt; Falk Mancke; Dorina Winter; Christian Schmahl; Sabine C Herpertz
Journal:  Brain Behav       Date:  2019-08-14       Impact factor: 2.708

5.  Detection of child depression using machine learning methods.

Authors:  Umme Marzia Haque; Enamul Kabir; Rasheda Khanam
Journal:  PLoS One       Date:  2021-12-16       Impact factor: 3.240

Review 6.  The Neurobiological Effects of Electroconvulsive Therapy Studied Through Magnetic Resonance: What Have We Learned, and Where Do We Go?

Authors:  Olga Therese Ousdal; Giulio E Brancati; Ute Kessler; Vera Erchinger; Anders M Dale; Christopher Abbott; Leif Oltedal
Journal:  Biol Psychiatry       Date:  2021-05-31       Impact factor: 13.382

  6 in total

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