Literature DB >> 26412943

Optical Techniques in Optogenetics.

Samarendra K Mohanty1, Vasudevan Lakshminarayananan2.   

Abstract

Optogenetics is an innovative technique for optical control of cells. This field has exploded over the past decade or so and has given rise to great advances in neuroscience. A variety of applications both from the basic and applied research have emerged, turning the early ideas into a powerful paradigm for cell biology, neuroscience and medical research. This review aims at highlighting the basic concepts that are essential for a comprehensive understanding of optogenetics and some important biological/biomedical applications. Further, emphasis is placed on advancement in optogenetics-associated light-based methods for controlling gene expression, spatially-controlled optogenetic stimulation and detection of cellular activities.

Entities:  

Keywords:  Optogenetics; biomedical optics; biophotonics; biophysics; cell biology; neuroscience; vision science

Year:  2015        PMID: 26412943      PMCID: PMC4582796          DOI: 10.1080/09500340.2015.1010620

Source DB:  PubMed          Journal:  J Mod Opt        ISSN: 0950-0340            Impact factor:   1.464


  109 in total

Review 1.  Learning retina implants with epiretinal contacts.

Authors:  R Eckmiller
Journal:  Ophthalmic Res       Date:  1997       Impact factor: 2.892

2.  Fast noninvasive activation and inhibition of neural and network activity by vertebrate rhodopsin and green algae channelrhodopsin.

Authors:  Xiang Li; Davina V Gutierrez; M Gartz Hanson; Jing Han; Melanie D Mark; Hillel Chiel; Peter Hegemann; Lynn T Landmesser; Stefan Herlitze
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-23       Impact factor: 11.205

3.  Spectral-domain optical coherence phase microscopy for quantitative phase-contrast imaging.

Authors:  Chulmin Joo; Taner Akkin; Barry Cense; Boris H Park; Johannes F de Boer
Journal:  Opt Lett       Date:  2005-08-15       Impact factor: 3.776

4.  Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.

Authors:  Georg Nagel; Martin Brauner; Jana F Liewald; Nona Adeishvili; Ernst Bamberg; Alexander Gottschalk
Journal:  Curr Biol       Date:  2005-12-20       Impact factor: 10.834

5.  Multimodal fast optical interrogation of neural circuitry.

Authors:  Feng Zhang; Li-Ping Wang; Martin Brauner; Jana F Liewald; Kenneth Kay; Natalie Watzke; Phillip G Wood; Ernst Bamberg; Georg Nagel; Alexander Gottschalk; Karl Deisseroth
Journal:  Nature       Date:  2007-04-05       Impact factor: 49.962

6.  Channelrhodopsin-2 gene transduced into retinal ganglion cells restores functional vision in genetically blind rats.

Authors:  Hiroshi Tomita; Eriko Sugano; Hitomi Isago; Teru Hiroi; Zhuo Wang; Emi Ohta; Makoto Tamai
Journal:  Exp Eye Res       Date:  2009-12-27       Impact factor: 3.467

7.  Imaging cellular signals in the heart in vivo: Cardiac expression of the high-signal Ca2+ indicator GCaMP2.

Authors:  Yvonne N Tallini; Masamichi Ohkura; Bum-Rak Choi; Guangju Ji; Keiji Imoto; Robert Doran; Jane Lee; Patricia Plan; Jason Wilson; Hong-Bo Xin; Atsushi Sanbe; James Gulick; John Mathai; Jeffrey Robbins; Guy Salama; Junichi Nakai; Michael I Kotlikoff
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-13       Impact factor: 11.205

8.  Millisecond-timescale optical control of neural dynamics in the nonhuman primate brain.

Authors:  Xue Han; Xiaofeng Qian; Jacob G Bernstein; Hui-Hui Zhou; Giovanni Talei Franzesi; Patrick Stern; Roderick T Bronson; Ann M Graybiel; Robert Desimone; Edward S Boyden
Journal:  Neuron       Date:  2009-04-30       Impact factor: 17.173

9.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.

Authors:  Georg Nagel; Tanjef Szellas; Wolfram Huhn; Suneel Kateriya; Nona Adeishvili; Peter Berthold; Doris Ollig; Peter Hegemann; Ernst Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

10.  Two-photon optogenetics of dendritic spines and neural circuits.

Authors:  Adam M Packer; Darcy S Peterka; Jan J Hirtz; Rohit Prakash; Karl Deisseroth; Rafael Yuste
Journal:  Nat Methods       Date:  2012-11-11       Impact factor: 28.547

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  12 in total

1.  Wireless opto-electro neural interface for experiments with small freely behaving animals.

Authors:  Yaoyao Jia; Wasif Khan; Byunghun Lee; Bin Fan; Fatma Madi; Arthur Weber; Wen Li; Maysam Ghovanloo
Journal:  J Neural Eng       Date:  2018-05-25       Impact factor: 5.379

2.  Polydimethylsiloxane-based optical waveguides for tetherless powering of floating microstimulators.

Authors:  Ali Ersen; Mesut Sahin
Journal:  J Biomed Opt       Date:  2017-05-01       Impact factor: 3.170

3.  Role of Graph Architecture in Controlling Dynamical Networks with Applications to Neural Systems.

Authors:  Jason Z Kim; Jonathan M Soffer; Ari E Kahn; Jean M Vettel; Fabio Pasqualetti; Danielle S Bassett
Journal:  Nat Phys       Date:  2017-09-25       Impact factor: 20.034

Review 4.  Optogenetically controlled protein kinases for regulation of cellular signaling.

Authors:  Anna V Leopold; Konstantin G Chernov; Vladislav V Verkhusha
Journal:  Chem Soc Rev       Date:  2018-04-03       Impact factor: 54.564

5.  Light-mediated Reversible Modulation of the Mitogen-activated Protein Kinase Pathway during Cell Differentiation and Xenopus Embryonic Development.

Authors:  Vishnu V Krishnamurthy; Aurora J Turgeon; John S Khamo; Payel Mondal; Savanna R Sharum; Wenyan Mei; Jing Yang; Kai Zhang
Journal:  J Vis Exp       Date:  2017-06-15       Impact factor: 1.355

6.  Optogenetic Control of the Canonical Wnt Signaling Pathway During Xenopus laevis Embryonic Development.

Authors:  Vishnu V Krishnamurthy; Hyojeong Hwang; Jia Fu; Jing Yang; Kai Zhang
Journal:  J Mol Biol       Date:  2021-05-19       Impact factor: 6.151

Review 7.  Recent Progress of Development of Optogenetic Implantable Neural Probes.

Authors:  Hubin Zhao
Journal:  Int J Mol Sci       Date:  2017-08-11       Impact factor: 5.923

8.  Optical Waveguides and Integrated Optical Devices for Medical Diagnosis, Health Monitoring and Light Therapies.

Authors:  Jiayu Wang; Jianfei Dong
Journal:  Sensors (Basel)       Date:  2020-07-17       Impact factor: 3.576

9.  Overexpression of Different Types of Microbial Rhodopsins with a Highly Expressible Bacteriorhodopsin from Haloarcula marismortui as a Single Protein in E. coli.

Authors:  Cheng-Hong Tu; Hsiu-Ping Yi; Shiang-Yuan Hsieh; Hong-Syuan Lin; Chii-Shen Yang
Journal:  Sci Rep       Date:  2018-09-19       Impact factor: 4.379

10.  Wireless optogenetics protects against obesity via stimulation of non-canonical fat thermogenesis.

Authors:  Kazuki Tajima; Kenji Ikeda; Yuji Tanabe; Ella A Thomson; Takeshi Yoneshiro; Yasuo Oguri; Marc D Ferro; Ada S Y Poon; Shingo Kajimura
Journal:  Nat Commun       Date:  2020-04-07       Impact factor: 14.919

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