Literature DB >> 26411860

Detection of correlated conformational fluctuations in intrinsically disordered proteins through paramagnetic relaxation interference.

D Kurzbach1, A Vanas1, A G Flamm1, N Tarnoczi1, G Kontaxis1, N Maltar-Strmečki2, K Widder2, D Hinderberger2, R Konrat1.   

Abstract

Functionally relevant conformational states of intrinsically disordered proteins (IDPs) are typically concealed in a vast space of fast interconverting structures. Here we present a novel methodology, NMR-based paramagnetic relaxation interference (PRI), that allows for direct observation of concerted motions and cooperatively folded sub-states in IDPs. The proposed NMR technique is based on the exploitation of cross correlated electron-nuclear dipolar relaxation interferences in doubly spin-labeled proteins and probes the transient spatial encounter of electron-nucleus spin pairs.

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Year:  2016        PMID: 26411860     DOI: 10.1039/c5cp04858c

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  10 in total

1.  Accurate model of liquid-liquid phase behavior of intrinsically disordered proteins from optimization of single-chain properties.

Authors:  Giulio Tesei; Thea K Schulze; Ramon Crehuet; Kresten Lindorff-Larsen
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-02       Impact factor: 11.205

Review 2.  Deciphering the Structure and Formation of Amyloids in Neurodegenerative Diseases With Chemical Biology Tools.

Authors:  Isabelle Landrieu; Elian Dupré; Davy Sinnaeve; Léa El Hajjar; Caroline Smet-Nocca
Journal:  Front Chem       Date:  2022-05-12       Impact factor: 5.545

3.  Inference of Joint Conformational Distributions from Separately Acquired Experimental Measurements.

Authors:  Jennifer M Hays; Emily Boland; Peter M Kasson
Journal:  J Phys Chem Lett       Date:  2021-02-08       Impact factor: 6.475

Review 4.  Distance-independent Cross-correlated Relaxation and Isotropic Chemical Shift Modulation in Protein Dynamics Studies.

Authors:  Beat Vögeli; Liliya Vugmeyster
Journal:  Chemphyschem       Date:  2018-09-03       Impact factor: 3.520

Review 5.  Interactions by Disorder - A Matter of Context.

Authors:  Katrine Bugge; Inna Brakti; Catarina B Fernandes; Jesper E Dreier; Jeppe E Lundsgaard; Johan G Olsen; Karen Skriver; Birthe B Kragelund
Journal:  Front Mol Biosci       Date:  2020-06-16

6.  Characterization of Weak Protein Domain Structure by Spin-Label Distance Distributions.

Authors:  Irina Ritsch; Laura Esteban-Hofer; Elisabeth Lehmann; Leonidas Emmanouilidis; Maxim Yulikov; Frédéric H-T Allain; Gunnar Jeschke
Journal:  Front Mol Biosci       Date:  2021-04-12

7.  DNP-Enhanced MAS NMR: A Tool to Snapshot Conformational Ensembles of α-Synuclein in Different States.

Authors:  Boran Uluca; Thibault Viennet; Dušan Petrović; Hamed Shaykhalishahi; Franziska Weirich; Ayşenur Gönülalan; Birgit Strodel; Manuel Etzkorn; Wolfgang Hoyer; Henrike Heise
Journal:  Biophys J       Date:  2018-04-10       Impact factor: 4.033

Review 8.  Intramolecular Fuzzy Interactions Involving Intrinsically Disordered Domains.

Authors:  Miguel Arbesú; Guillermo Iruela; Héctor Fuentes; João M C Teixeira; Miquel Pons
Journal:  Front Mol Biosci       Date:  2018-04-30

9.  Impact of the Hereditary P301L Mutation on the Correlated Conformational Dynamics of Human Tau Protein Revealed by the Paramagnetic Relaxation Enhancement NMR Experiments.

Authors:  Ryosuke Kawasaki; Shin-Ichi Tate
Journal:  Int J Mol Sci       Date:  2020-05-30       Impact factor: 5.923

10.  Long-range Regulation of Partially Folded Amyloidogenic Peptides.

Authors:  Shayon Bhattacharya; Liang Xu; Damien Thompson
Journal:  Sci Rep       Date:  2020-05-05       Impact factor: 4.379

  10 in total

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