Literature DB >> 26410453

Complete genome sequence of Clostridium pasteurianum NRRL B-598, a non-type strain producing butanol.

Karel Sedlar1, Jan Kolek2, Helena Skutkova3, Barbora Branska4, Ivo Provaznik5, Petra Patakova6.   

Abstract

The strain Clostridium pasteurianum NRRL B-598 is non-type, oxygen tolerant, spore-forming, mesophilic and heterofermentative strain with high hydrogen production and ability of acetone-butanol fermentation (ethanol production being negligible). Here, we present the annotated complete genome sequence of this bacterium, replacing the previous draft genome assembly. The genome consisting of a single circular 6,186,879 bp chromosome with no plasmid was determined using PacBio RSII and Roche 454 sequencing.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Butanol; Clostridium pasteurianum; Genome; Oxygen tolerance; Pyrosequencing; Single molecule real-time sequencing

Mesh：

Substances：

Year:  2015        PMID： 26410453     DOI： 10.1016/j.jbiotec.2015.09.022

Source DB:  PubMed          Journal:  J Biotechnol        ISSN： 0168-1656            Impact factor:   3.307


  11 in total

1.  The draft genome sequence of Clostridium sp. strain CT7, an isolate capable of producing butanol but not acetone and 1,3-propanediol from crude glycerol.

Authors:  Jiasheng Lu; Tianpeng Chen; Yujia Jiang; Wenming Zhang; Weiliang Dong; Jie Zhou; Jiangfeng Ma; Yan Fang; Min Jiang; Fengxue Xin
Journal:  3 Biotech       Date:  2019-02-01       Impact factor: 2.406

2.  Comprehensive investigations of biobutanol production by a non-acetone and 1,3-propanediol generating Clostridium strain from glycerol and polysaccharides.

Authors:  Fengxue Xin; Chao Wang; Weiliang Dong; Wenming Zhang; Hao Wu; Jiangfeng Ma; Min Jiang
Journal:  Biotechnol Biofuels       Date:  2016-10-18       Impact factor: 6.040

3.  The Physiological Functions and Structural Determinants of Catalytic Bias in the [FeFe]-Hydrogenases CpI and CpII of Clostridium pasteurianum Strain W5.

Authors:  Jesse B Therien; Jacob H Artz; Saroj Poudel; Trinity L Hamilton; Zhenfeng Liu; Seth M Noone; Michael W W Adams; Paul W King; Donald A Bryant; Eric S Boyd; John W Peters
Journal:  Front Microbiol       Date:  2017-07-12       Impact factor: 5.640

4.  Phylogenic study of Lemnoideae (duckweeds) through complete chloroplast genomes for eight accessions.

Authors:  Yanqiang Ding; Yang Fang; Ling Guo; Zhidan Li; Kaize He; Yun Zhao; Hai Zhao
Journal:  PeerJ       Date:  2017-12-22       Impact factor: 2.984

5.  Transcription profiling of butanol producer Clostridium beijerinckii NRRL B-598 using RNA-Seq.

Authors:  Karel Sedlar; Pavlina Koscova; Maryna Vasylkivska; Barbora Branska; Jan Kolek; Kristyna Kupkova; Petra Patakova; Ivo Provaznik
Journal:  BMC Genomics       Date:  2018-05-30       Impact factor: 3.969

6.  Acidogenesis, solventogenesis, metabolic stress response and life cycle changes in Clostridium beijerinckii NRRL B-598 at the transcriptomic level.

Authors:  Petra Patakova; Barbora Branska; Karel Sedlar; Maryna Vasylkivska; Katerina Jureckova; Jan Kolek; Pavlina Koscova; Ivo Provaznik
Journal:  Sci Rep       Date:  2019-02-04       Impact factor: 4.379

7.  A transcriptional response of Clostridium beijerinckii NRRL B-598 to a butanol shock.

Authors:  Karel Sedlar; Jan Kolek; Markus Gruber; Katerina Jureckova; Barbora Branska; Gergely Csaba; Maryna Vasylkivska; Ralf Zimmer; Petra Patakova; Ivo Provaznik
Journal:  Biotechnol Biofuels       Date:  2019-10-13       Impact factor: 6.040

8.  Transcriptional analysis of amino acid, metal ion, vitamin and carbohydrate uptake in butanol-producing Clostridium beijerinckii NRRL B-598.

Authors:  Maryna Vasylkivska; Katerina Jureckova; Barbora Branska; Karel Sedlar; Jan Kolek; Ivo Provaznik; Petra Patakova
Journal:  PLoS One       Date:  2019-11-07       Impact factor: 3.240

9.  Dam and Dcm methylations prevent gene transfer into Clostridium pasteurianum NRRL B-598: development of methods for electrotransformation, conjugation, and sonoporation.

Authors:  Jan Kolek; Karel Sedlar; Ivo Provaznik; Petra Patakova
Journal:  Biotechnol Biofuels       Date:  2016-01-20       Impact factor: 6.040

10.  Flow cytometry analysis of Clostridium beijerinckii NRRL B-598 populations exhibiting different phenotypes induced by changes in cultivation conditions.

Authors:  Barbora Branska; Zora Pechacova; Jan Kolek; Maryna Vasylkivska; Petra Patakova
Journal:  Biotechnol Biofuels       Date:  2018-04-06       Impact factor: 6.040
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