Literature DB >> 26408097

Discovery and functional characterization of cardiovascular long noncoding RNAs.

Samir Ounzain1, Frédéric Burdet2, Mark Ibberson2, Thierry Pedrazzini3.   

Abstract

Recent advances in sequencing and genomic technologies have resulted in the discovery of thousands of previously unannotated long noncoding RNAs (lncRNAs). However, their function in the cardiovascular system remains elusive. Here we review and discuss considerations for cardiovascular lncRNA discovery, annotation and functional characterization. Although we primarily focus on the heart, the proposed pipeline should foster functional and mechanistic exploration of these transcripts in various cardiovascular pathologies. Moreover, these insights could ultimately lead to novel therapeutic approaches targeting lncRNAs for the amelioration of cardiovascular diseases including heart failure.
Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Entities:  

Keywords:  Cardiovascular disease; Discovery; Functional characterization; Genomics; Long noncoding RNA

Mesh:

Substances:

Year:  2015        PMID: 26408097     DOI: 10.1016/j.yjmcc.2015.09.013

Source DB:  PubMed          Journal:  J Mol Cell Cardiol        ISSN: 0022-2828            Impact factor:   5.000


  27 in total

1.  Long non-coding RNAs in heart failure: a promising future with much to learn.

Authors:  Samir Ounzain; Thierry Pedrazzini
Journal:  Ann Transl Med       Date:  2016-08

2.  Cytoplasmic nucleic acid-based XNAs directly enhance live cardiac cell function by a Ca2+ cycling-independent mechanism via the sarcomere.

Authors:  Brian R Thompson; Kailey J Soller; Anthony Vetter; Jing Yang; Gianluigi Veglia; Michael T Bowser; Joseph M Metzger
Journal:  J Mol Cell Cardiol       Date:  2019-03-05       Impact factor: 5.000

3.  Variable Levels of Long Noncoding RNA Expression in DNA Mismatch Repair-Proficient Early-Stage Colon Cancer.

Authors:  Qian Li; Nanshan Li; Yueqiong Lao; Wu Lin; Guojun Jiang; Nan Wei; Canghai Wang; Kuiliang Liu; Jing Wu
Journal:  Dig Dis Sci       Date:  2017-02-03       Impact factor: 3.199

Review 4.  Noncoding RNAs in cardiovascular diseases.

Authors:  Priyatansh Gurha
Journal:  Curr Opin Cardiol       Date:  2019-05       Impact factor: 2.161

5.  Comparative genome-wide DNA methylation analysis in myocardial tissue from donors with and without Down syndrome.

Authors:  Romina B Cejas; Jie Wang; Rachael Hageman-Blair; Song Liu; Javier G Blanco
Journal:  Gene       Date:  2020-08-27       Impact factor: 3.913

6.  The long noncoding RNA NRF regulates programmed necrosis and myocardial injury during ischemia and reperfusion by targeting miR-873.

Authors:  K Wang; F Liu; C-Y Liu; T An; J Zhang; L-Y Zhou; M Wang; Y-H Dong; N Li; J-N Gao; Y-F Zhao; P-F Li
Journal:  Cell Death Differ       Date:  2016-06-03       Impact factor: 15.828

7.  TGF-β Mediates Renal Fibrosis via the Smad3-Erbb4-IR Long Noncoding RNA Axis.

Authors:  Min Feng; Patrick Ming-Kuen Tang; Xiao-Ru Huang; Si-Fan Sun; Yong-Ke You; Jun Xiao; Lin-Li Lv; An-Ping Xu; Hui-Yao Lan
Journal:  Mol Ther       Date:  2017-10-05       Impact factor: 11.454

Review 8.  MicroRNA regulation of autophagy in cardiovascular disease.

Authors:  Matthew A Sermersheim; Ki Ho Park; Kristyn Gumpper; T M Ayodele Adesanya; Kuncheng Song; Tao Tan; Xingcong Ren; Jin-Ming Yang; Hua Zhu
Journal:  Front Biosci (Landmark Ed)       Date:  2017-01-01

9.  LncRNA HBL1 is required for genome-wide PRC2 occupancy and function in cardiogenesis from human pluripotent stem cells.

Authors:  Juli Liu; Sheng Liu; Lei Han; Yi Sheng; Yucheng Zhang; Il-Man Kim; Jun Wan; Lei Yang
Journal:  Development       Date:  2021-06-28       Impact factor: 6.868

10.  A long non-coding RNA GATA6-AS1 adjacent to GATA6 is required for cardiomyocyte differentiation from human pluripotent stem cells.

Authors:  Rajneesh Jha; Dong Li; Qingling Wu; Katherine E Ferguson; Parvin Forghani; Gregory C Gibson; Chunhui Xu
Journal:  FASEB J       Date:  2020-09-04       Impact factor: 5.191

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