Literature DB >> 26405830

Global distribution and vertical patterns of a prymnesiophyte-cyanobacteria obligate symbiosis.

Ana M Cabello1, Francisco M Cornejo-Castillo1, Nicolas Raho2, Dolors Blasco1, Montserrat Vidal3, Stéphane Audic4,5, Colomban de Vargas4,5, Mikel Latasa6, Silvia G Acinas1, Ramon Massana1.   

Abstract

A marine symbiosis has been recently discovered between prymnesiophyte species and the unicellular diazotrophic cyanobacterium UCYN-A. At least two different UCYN-A phylotypes exist, the clade UCYN-A1 in symbiosis with an uncultured small prymnesiophyte and the clade UCYN-A2 in symbiosis with the larger Braarudosphaera bigelowii. We targeted the prymnesiophyte-UCYN-A1 symbiosis by double CARD-FISH (catalyzed reporter deposition-fluorescence in situ hybridization) and analyzed its abundance in surface samples from the MALASPINA circumnavigation expedition. Our use of a specific probe for the prymnesiophyte partner allowed us to verify that this algal species virtually always carried the UCYN-A symbiont, indicating that the association was also obligate for the host. The prymnesiophyte-UCYN-A1 symbiosis was detected in all ocean basins, displaying a patchy distribution with abundances (up to 500 cells ml(-1)) that could vary orders of magnitude. Additional vertical profiles taken at the NE Atlantic showed that this symbiosis occupied the upper water column and disappeared towards the Deep Chlorophyll Maximum, where the biomass of the prymnesiophyte assemblage peaked. Moreover, sequences of both prymnesiophyte partners were searched within a large 18S rDNA metabarcoding data set from the Tara-Oceans expedition around the world. This sequence-based analysis supported the patchy distribution of the UCYN-A1 host observed by CARD-FISH and highlighted an unexpected homogeneous distribution (at low relative abundance) of B. bigelowii in the open ocean. Our results demonstrate that partners are always in symbiosis in nature and show contrasted ecological patterns of the two related lineages.

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Year:  2015        PMID: 26405830      PMCID: PMC4817677          DOI: 10.1038/ismej.2015.147

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  23 in total

1.  Oligonucleotide probes for the identification of three algal groups by dot blot and fluorescent whole-cell hybridization.

Authors:  N Simon; L Campbell; E Ornolfsdottir; R Groben; L Guillou; M Lange; L K Medlin
Journal:  J Eukaryot Microbiol       Date:  2000 Jan-Feb       Impact factor: 3.346

2.  Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean.

Authors:  Colomban de Vargas; Stéphane Audic; Nicolas Henry; Johan Decelle; Frédéric Mahé; Ramiro Logares; Enrique Lara; Cédric Berney; Noan Le Bescot; Ian Probert; Margaux Carmichael; Julie Poulain; Sarah Romac; Sébastien Colin; Jean-Marc Aury; Lucie Bittner; Samuel Chaffron; Micah Dunthorn; Stefan Engelen; Olga Flegontova; Lionel Guidi; Aleš Horák; Olivier Jaillon; Gipsi Lima-Mendez; Julius Lukeš; Shruti Malviya; Raphael Morard; Matthieu Mulot; Eleonora Scalco; Raffaele Siano; Flora Vincent; Adriana Zingone; Céline Dimier; Marc Picheral; Sarah Searson; Stefanie Kandels-Lewis; Silvia G Acinas; Peer Bork; Chris Bowler; Gabriel Gorsky; Nigel Grimsley; Pascal Hingamp; Daniele Iudicone; Fabrice Not; Hiroyuki Ogata; Stephane Pesant; Jeroen Raes; Michael E Sieracki; Sabrina Speich; Lars Stemmann; Shinichi Sunagawa; Jean Weissenbach; Patrick Wincker; Eric Karsenti
Journal:  Science       Date:  2015-05-22       Impact factor: 47.728

3.  Comparative genomics reveals surprising divergence of two closely related strains of uncultivated UCYN-A cyanobacteria.

Authors:  Deniz Bombar; Philip Heller; Patricia Sanchez-Baracaldo; Brandon J Carter; Jonathan P Zehr
Journal:  ISME J       Date:  2014-09-16       Impact factor: 10.302

4.  Genetic diversity of the unicellular nitrogen-fixing cyanobacteria UCYN-A and its prymnesiophyte host.

Authors:  Anne Thompson; Brandon J Carter; Kendra Turk-Kubo; Francesca Malfatti; Farooq Azam; Jonathan P Zehr
Journal:  Environ Microbiol       Date:  2014-05-21       Impact factor: 5.491

5.  Distribution of a consortium between unicellular algae and the N2 fixing cyanobacterium UCYN-A in the North Atlantic Ocean.

Authors:  Andreas Krupke; Gaute Lavik; Hannah Halm; Bernhard M Fuchs; Rudolf I Amann; Marcel M M Kuypers
Journal:  Environ Microbiol       Date:  2014-04-17       Impact factor: 5.491

6.  In situ identification and N₂ and C fixation rates of uncultivated cyanobacteria populations.

Authors:  Andreas Krupke; Niculina Musat; Julie Laroche; Wiebke Mohr; Bernhard M Fuchs; Rudolf I Amann; Marcel M M Kuypers; Rachel A Foster
Journal:  Syst Appl Microbiol       Date:  2013-03-27       Impact factor: 4.022

7.  Complete genome of a nonphotosynthetic cyanobacterium in a diatom reveals recent adaptations to an intracellular lifestyle.

Authors:  Takuro Nakayama; Ryoma Kamikawa; Goro Tanifuji; Yuichiro Kashiyama; Naohiko Ohkouchi; John M Archibald; Yuji Inagaki
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-21       Impact factor: 11.205

8.  Unicellular cyanobacterium symbiotic with a single-celled eukaryotic alga.

Authors:  Anne W Thompson; Rachel A Foster; Andreas Krupke; Brandon J Carter; Niculina Musat; Daniel Vaulot; Marcel M M Kuypers; Jonathan P Zehr
Journal:  Science       Date:  2012-09-21       Impact factor: 47.728

9.  The effect of nutrients on carbon and nitrogen fixation by the UCYN-A-haptophyte symbiosis.

Authors:  Andreas Krupke; Wiebke Mohr; Julie LaRoche; Bernhard M Fuchs; Rudolf I Amann; Marcel M M Kuypers
Journal:  ISME J       Date:  2014-12-23       Impact factor: 10.302

10.  Ecogenomic sensor reveals controls on N2-fixing microorganisms in the North Pacific Ocean.

Authors:  Julie C Robidart; Matthew J Church; John P Ryan; François Ascani; Samuel T Wilson; Deniz Bombar; Roman Marin; Kelvin J Richards; David M Karl; Christopher A Scholin; Jonathan P Zehr
Journal:  ISME J       Date:  2014-01-30       Impact factor: 10.302

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  18 in total

1.  Elevated temperature increases carbon and nitrogen fluxes between phytoplankton and heterotrophic bacteria through physical attachment.

Authors:  Nestor Arandia-Gorostidi; Peter K Weber; Laura Alonso-Sáez; Xosé Anxelu G Morán; Xavier Mayali
Journal:  ISME J       Date:  2016-12-06       Impact factor: 10.302

2.  Small eukaryotic phytoplankton communities in tropical waters off Brazil are dominated by symbioses between Haptophyta and nitrogen-fixing cyanobacteria.

Authors:  Catherine Gérikas Ribeiro; Adriana Lopes Dos Santos; Dominique Marie; Frederico Pereira Brandini; Daniel Vaulot
Journal:  ISME J       Date:  2018-02-09       Impact factor: 10.302

3.  Heterotrophic Bacteria Dominate the Diazotrophic Community in the Eastern Indian Ocean (EIO) during Pre-Southwest Monsoon.

Authors:  Chao Wu; Jinjun Kan; Haijiao Liu; Laxman Pujari; Congcong Guo; Xingzhou Wang; Jun Sun
Journal:  Microb Ecol       Date:  2019-04-29       Impact factor: 4.552

4.  The small unicellular diazotrophic symbiont, UCYN-A, is a key player in the marine nitrogen cycle.

Authors:  Clara Martínez-Pérez; Wiebke Mohr; Carolin R Löscher; Julien Dekaezemacker; Sten Littmann; Pelin Yilmaz; Nadine Lehnen; Bernhard M Fuchs; Gaute Lavik; Ruth A Schmitz; Julie LaRoche; Marcel M M Kuypers
Journal:  Nat Microbiol       Date:  2016-09-12       Impact factor: 17.745

Review 5.  Tara Oceans: towards global ocean ecosystems biology.

Authors:  Shinichi Sunagawa; Silvia G Acinas; Peer Bork; Chris Bowler; Damien Eveillard; Gabriel Gorsky; Lionel Guidi; Daniele Iudicone; Eric Karsenti; Fabien Lombard; Hiroyuki Ogata; Stephane Pesant; Matthew B Sullivan; Patrick Wincker; Colomban de Vargas
Journal:  Nat Rev Microbiol       Date:  2020-05-12       Impact factor: 60.633

6.  Importance of salt fingering for new nitrogen supply in the oligotrophic ocean.

Authors:  B Fernández-Castro; B Mouriño-Carballido; E Marañón; P Chouciño; J Gago; T Ramírez; M Vidal; A Bode; D Blasco; S-J Royer; M Estrada; R Simó
Journal:  Nat Commun       Date:  2015-09-09       Impact factor: 14.919

7.  Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods.

Authors:  Juan José Pierella Karlusich; Eric Pelletier; Fabien Lombard; Madeline Carsique; Etienne Dvorak; Sébastien Colin; Marc Picheral; Francisco M Cornejo-Castillo; Silvia G Acinas; Rainer Pepperkok; Eric Karsenti; Colomban de Vargas; Patrick Wincker; Chris Bowler; Rachel A Foster
Journal:  Nat Commun       Date:  2021-07-06       Impact factor: 14.919

8.  Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton.

Authors:  Francisco M Cornejo-Castillo; Ana M Cabello; Guillem Salazar; Patricia Sánchez-Baracaldo; Gipsi Lima-Mendez; Pascal Hingamp; Adriana Alberti; Shinichi Sunagawa; Peer Bork; Colomban de Vargas; Jeroen Raes; Chris Bowler; Patrick Wincker; Jonathan P Zehr; Josep M Gasol; Ramon Massana; Silvia G Acinas
Journal:  Nat Commun       Date:  2016-03-22       Impact factor: 14.919

Review 9.  How mutualisms arise in phytoplankton communities: building eco-evolutionary principles for aquatic microbes.

Authors:  Elena Kazamia; Katherine Emma Helliwell; Saul Purton; Alison Gail Smith
Journal:  Ecol Lett       Date:  2016-07       Impact factor: 9.492

10.  Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan.

Authors:  Shunyan Cheung; Koji Suzuki; Hiroaki Saito; Yu Umezawa; Xiaomin Xia; Hongbin Liu
Journal:  PLoS One       Date:  2017-10-23       Impact factor: 3.240

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