Literature DB >> 26404089

An Arabidopsis PWI and RRM motif-containing protein is critical for pre-mRNA splicing and ABA responses.

Xiangqiang Zhan1, Bilian Qian2, Fengqiu Cao1, Wenwu Wu1, Lan Yang1, Qingmei Guan2, Xianbin Gu2, Pengcheng Wang3, Temiloluwa A Okusolubo2, Stephanie L Dunn2, Jian-Kang Zhu1,3, Jianhua Zhu2.   

Abstract

The phytohormone abscisic acid (ABA) is important for growth, development and stress responses in plants. Recent research has identified ABA receptors and signalling components that regulate seed germination and stomatal closure. However, proteins that regulate ABA signalling remain poorly understood. Here we use a forward-genetic screen to identify rbm25-1 and rbm25-2, two Arabidopsis mutants with increased sensitivity to growth inhibition by ABA. Using RNA-seq, we found that RBM25 controls the splicing of many pre-mRNAs. The protein phosphatase 2C HAB1, a critical component in ABA signalling, shows a dramatic defect in pre-mRNA splicing in rbm25 mutants. Ectopic expression of a HAB1 complementary DNA derived from wild-type mRNAs partially suppresses the rbm25-2 mutant phenotype. We suggest that RNA splicing is of particular importance for plant response to ABA and that the splicing factor RBM25 has a critical role in this response.

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Year:  2015        PMID: 26404089      PMCID: PMC5514415          DOI: 10.1038/ncomms9139

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  65 in total

Review 1.  Mediator of transcriptional regulation.

Authors:  S Björklund; Y J Kim
Journal:  Trends Biochem Sci       Date:  1996-09       Impact factor: 13.807

2.  The plant cuticle is required for osmotic stress regulation of abscisic acid biosynthesis and osmotic stress tolerance in Arabidopsis.

Authors:  Zhen-Yu Wang; Liming Xiong; Wenbo Li; Jian-Kang Zhu; Jianhua Zhu
Journal:  Plant Cell       Date:  2011-05-24       Impact factor: 11.277

3.  LSM proteins provide accurate splicing and decay of selected transcripts to ensure normal Arabidopsis development.

Authors:  Carlos Perea-Resa; Tamara Hernández-Verdeja; Rosa López-Cobollo; María del Mar Castellano; Julio Salinas
Journal:  Plant Cell       Date:  2012-12-07       Impact factor: 11.277

4.  Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins.

Authors:  Sang-Youl Park; Pauline Fung; Noriyuki Nishimura; Davin R Jensen; Hiroaki Fujii; Yang Zhao; Shelley Lumba; Julia Santiago; Americo Rodrigues; Tsz-Fung F Chow; Simon E Alfred; Dario Bonetta; Ruth Finkelstein; Nicholas J Provart; Darrell Desveaux; Pedro L Rodriguez; Peter McCourt; Jian-Kang Zhu; Julian I Schroeder; Brian F Volkman; Sean R Cutler
Journal:  Science       Date:  2009-04-30       Impact factor: 47.728

5.  Triple loss of function of protein phosphatases type 2C leads to partial constitutive response to endogenous abscisic acid.

Authors:  Silvia Rubio; Americo Rodrigues; Angela Saez; Marie B Dizon; Alexander Galle; Tae-Houn Kim; Julia Santiago; Jaume Flexas; Julian I Schroeder; Pedro L Rodriguez
Journal:  Plant Physiol       Date:  2009-05-20       Impact factor: 8.340

6.  Arabidopsis mutant deficient in 3 abscisic acid-activated protein kinases reveals critical roles in growth, reproduction, and stress.

Authors:  Hiroaki Fujii; Jian-Kang Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-06       Impact factor: 11.205

7.  Control of leaf and chloroplast development by the Arabidopsis gene pale cress.

Authors:  R S Reiter; S A Coomber; T M Bourett; G E Bartley; P A Scolnik
Journal:  Plant Cell       Date:  1994-09       Impact factor: 11.277

8.  Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.

Authors:  Taishi Umezawa; Naoyuki Sugiyama; Fuminori Takahashi; Jeffrey C Anderson; Yasushi Ishihama; Scott C Peck; Kazuo Shinozaki
Journal:  Sci Signal       Date:  2013-04-09       Impact factor: 8.192

9.  Transcriptome analysis of alternative splicing events regulated by SRSF10 reveals position-dependent splicing modulation.

Authors:  Xuexia Zhou; Wenwu Wu; Huang Li; Yuanming Cheng; Ning Wei; Jie Zong; Xiaoyan Feng; Zhiqin Xie; Dai Chen; James L Manley; Hui Wang; Ying Feng
Journal:  Nucleic Acids Res       Date:  2014-01-17       Impact factor: 16.971

10.  TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions.

Authors:  Daehwan Kim; Geo Pertea; Cole Trapnell; Harold Pimentel; Ryan Kelley; Steven L Salzberg
Journal:  Genome Biol       Date:  2013-04-25       Impact factor: 13.583

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  38 in total

1.  Spliceosome component JANUS fulfills a role of mediator in transcriptional regulation during Arabidopsis development.

Authors:  Feng Xiong; Sha Li
Journal:  Plant Signal Behav       Date:  2020-10-30

2.  Spliceosomal protein U1A is involved in alternative splicing and salt stress tolerance in Arabidopsis thaliana.

Authors:  Jinbao Gu; Zhiqiang Xia; Yuehua Luo; Xingyu Jiang; Bilian Qian; He Xie; Jian-Kang Zhu; Liming Xiong; Jianhua Zhu; Zhen-Yu Wang
Journal:  Nucleic Acids Res       Date:  2018-02-28       Impact factor: 16.971

3.  Predicted Arabidopsis Interactome Resource and Gene Set Linkage Analysis: A Transcriptomic Analysis Resource.

Authors:  Heng Yao; Xiaoxuan Wang; Pengcheng Chen; Ling Hai; Kang Jin; Lixia Yao; Chuanzao Mao; Xin Chen
Journal:  Plant Physiol       Date:  2018-03-12       Impact factor: 8.340

4.  The U1 snRNP Subunit LUC7 Modulates Plant Development and Stress Responses via Regulation of Alternative Splicing.

Authors:  Marcella de Francisco Amorim; Eva-Maria Willing; Emese X Szabo; Anchilie G Francisco-Mangilet; Irina Droste-Borel; Boris Maček; Korbinian Schneeberger; Sascha Laubinger
Journal:  Plant Cell       Date:  2018-10-11       Impact factor: 11.277

Review 5.  Signaling mechanisms in abscisic acid-mediated stomatal closure.

Authors:  Po-Kai Hsu; Guillaume Dubeaux; Yohei Takahashi; Julian I Schroeder
Journal:  Plant J       Date:  2020-12-09       Impact factor: 6.417

6.  Alternative splicing is a Sorghum bicolor defense response to fungal infection.

Authors:  Lanxiang Wang; Moxian Chen; Fuyuan Zhu; Tao Fan; Jianhua Zhang; Clive Lo
Journal:  Planta       Date:  2019-11-27       Impact factor: 4.116

7.  OsDCL3b affects grain yield and quality in rice.

Authors:  Peng-Fei Liao; Jie-Xiu Ouyang; Jian-Jun Zhang; Lan Yang; Xin Wang; Xiao-Jue Peng; Dong Wang; You-Lin Zhu; Shao-Bo Li
Journal:  Plant Mol Biol       Date:  2019-01-16       Impact factor: 4.076

8.  Interaction network of core ABA signaling components in maize.

Authors:  Ying-Ge Wang; Feng-Ling Fu; Hao-Qiang Yu; Tao Hu; Yuan-Yuan Zhang; Yi Tao; Jian-Kang Zhu; Yang Zhao; Wan-Chen Li
Journal:  Plant Mol Biol       Date:  2018-01-17       Impact factor: 4.076

9.  The Arabidopsis lncRNA ASCO modulates the transcriptome through interaction with splicing factors.

Authors:  Richard Rigo; Jérémie Bazin; Natali Romero-Barrios; Michaël Moison; Leandro Lucero; Aurélie Christ; Moussa Benhamed; Thomas Blein; Stéphanie Huguet; Céline Charon; Martin Crespi; Federico Ariel
Journal:  EMBO Rep       Date:  2020-04-14       Impact factor: 8.807

10.  Intron-retained radish (Raphanus sativus L.) RsMYB1 transcripts found in colored-taproot lines enhance anthocyanin accumulation in transgenic Arabidopsis plants.

Authors:  Soyun Kim; Hayoung Song; Yoonkang Hur
Journal:  Plant Cell Rep       Date:  2021-07-25       Impact factor: 4.570

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