| Literature DB >> 26402310 |
Jun Yuan, Eric H Y Lau, Kuibiao Li, Y H Connie Leung, Zhicong Yang, Caojun Xie, Yufei Liu, Yanhui Liu, Xiaowei Ma, Jianping Liu, Xiaoquan Li, Kuncai Chen, Lei Luo, Biao Di, Benjamin J Cowling, Xiaoping Tang, Gabriel M Leung, Ming Wang, Malik Peiris.
Abstract
We assessed the effect of closing live poultry markets in China on influenza A(H7N9) virus detection and viability. Intensive sampling was carried out before, during, and after a 2-week citywide market closure; the markets were cleaned and disinfected at the beginning of the closure period. Swab samples were collected at different sites within the markets and tested for H7N9 by real-time reverse transcription PCR and culture. During the closure, H7N9 viral RNA detection and isolation rates in retail markets decreased by 79% (95% CI 64%-88%) and 92% (95% CI 58%-98%), respectively. However, viable H7N9 virus could be cultured from wastewater samples collected up to 2 days after the market closure began. Our findings indicates that poultry workers and the general population are constantly exposed to H7N9 virus at these markets and that market closure and disinfection rapidly reduces the amount of viable virus.Entities:
Keywords: China; Guangdong Province; Guangzhou; H7N9; avian influenza; control; disinfection; dressed poultry markets; human exposure; influenza; interventions; live poultry markets; market closure; respiratory infections; retail markets; southern China; surveillance; transmission; viruses; zoonoses
Mesh:
Year: 2015 PMID: 26402310 PMCID: PMC4593444 DOI: 10.3201/eid2110.150623
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Figure 1Geographic distribution of the live poultry markets under routine and enhanced surveillance in Guangzhou, China, 2014. Squares indicate routine surveillance sites; solid triangles indicate enhanced surveillance sites (in Panyu district); open squares indicate markets selected for comparison before and after market closure and disinfection.
Characteristics of 5 poultry markets under enhanced surveillance, Guangzhou, Guangdong Province, China, 2014*
| Market characteristic | Live poultry markets | Dressed poultry market | |
|---|---|---|---|
| Retail | Wholesale | ||
| Source of poultry | Wholesale market | Backyard or large farms | Wholesale market |
| Volume of poultry stock | Small | Large | Small |
| Live poultry sold | Yes | Yes | No |
| Size, m2 | 60/50/50† | 3,000 | 25 |
| No. poultry stalls | 6/5/5† | 67 | 5 |
| Approximate no. poultry traded/day | 206/285/112† | 28,640 | 190 |
| On-site slaughtering | Yes | Yes | No |
| Available sampling sites | |||
| Poultry cage | Yes | Yes | No |
| Defeathering machine | Yes | Yes | No |
| Chopping board | Yes | No | Yes |
| Processing table | Yes | No | Yes |
| Bucket holding poultry meat | No | Yes | No |
| Wastewater | Yes | Yes | Yes |
| Poultry drinking water | No | Yes | No |
| *Three retail LPMs, 1 wholesale LPM, and 1 DPM were randomly selected for study from 77 wet markets in Panyu district, where enhanced surveillance was implemented. †Data are for the 3 retail markets. | |||
Figure 2Detection rates for A) avian influenza A(H7N9) virus and B) all avian influenza viruses (AIVs) by using real-time reverse transcription PCR before and after disinfection in 4 retail live poultry markets (M1–M4), Guangzhou, China, 2014.
Figure 3Avian influenza virus (AIV) activity in wholesale, retail, and dressed poultry markets under enhanced surveillance in Guangzhou, China, 2014. A) AIV and B) influenza A(H7N9) virus detection rates as determined by real-time reverse transcription PCR (rRT-PCR). Circles at the top of panel B indicate H7N9 virus–positive (solid) and –negative (open) samples isolated by culture from the different types of poultry markets. Some H7N9 virus samples positive by rRT-PCR did not have sufficient sample remaining for virus culture; the numbers of samples cultured and positive at each time point are shown. C) H7N9 virus isolation rates as determined by culture. Rates for positive cultures were estimated on the basis of the samples available for culture, as described in Materials and Methods. Vertical bars indicate 95% CIs for detection rates and 95% credible intervals for isolation rates. Gray shading indicates the 2-week citywide market closure, which began on February 15, 2014.
Estimated effect of market closure and contaminated environmental sites on AIV and influenza A(H7N9) virus detection in 5 poultry markets under enhanced surveillance, Guangzhou, Guangdong Province, China, 2014*
| Variable | Retail LPMs, aOR (95% CI)† |
| Wholesale LPM, aOR (95% CI) |
| DPM, aOR (95% CI) | |||||
| rRT-PCR | H7N9 culture | rRT-PCR | H7N9 culture | rRT-PCR | ||||||
| AIV | H7N9 | AIV | H7N9 | AIV | H7N9 | |||||
| Period | ||||||||||
| Before market closure | Ref | Ref | Ref | Ref | –‡ | –‡ | Ref | Ref | ||
| During market closure | 0.25 (0.16–0.39) | 0.21 (0.12–0.36) | 0.08 (0.02–0.42) | 1.60 (0.52–4.90) | 0.22 (0.10–0.50) | 0.11 (0.01–0.89) | 0.30 (0.09–0.98) | 0.68 (0.12–3.89) | ||
| After market
closure | 1.78
(1.20–2.63) | 0.58
(0.35–0.95) | 0.73
(0.27–1.98) |
| 10.3
(3.52–30.3) | Ref | Ref |
| 5.27
(1.97–14.1) | 3.32
(0.68–16.1) |
| Environmental samples tested | ||||||||||
| Poultry cage | Ref | Ref | Ref | Ref | Ref | § | – | – | ||
| Defeathering machine | 1.15 (0.61–2.14) | 1.66 (0.74–3.70) | 1.25 (0.20–7.87) | 2.49 (1.09–5.68) | 1.21 (0.40–3.65) | § | – | – | ||
| Chopping board | 2.64 (1.60–4.37) | 2.12 (1.06–4.26) | 3.52 (0.88–14.0) | – | – | – | 0.56 (0.22–1.41) | 3.18 (0.98–10.3) | ||
| Processing table | 1.16 (0.73–1.85) | 1.15 (0.59–2.25) | 1.09 (0.26–4.67) | – | – | – | Ref | Ref | ||
| Bucket holding poultry meat | – | – | – | 0.97 (0.38–2.44) | 0.17 (0.02–1.40) | § | – | – | ||
| Wastewater | 1.60 (0.95–2.67) | 1.23 (0.58–2.62) | 1.41 (0.28–7.14) | 1.38 (0.70–2.73) | 0.91 (0.37–2.22) | § | 1.15 (0.44–3.06) | 1.16 (0.31–4.36) | ||
| Drinking water | – | – | – | 2.02 (0.44–9.38) | 2.32 (0.40–13.4) | § | – | – | ||
*AIV, avian influenza virus; aOR, adjusted odds ratio; DPM, dressed poultry market; LPM, live poultry market; ref, reference; rRT-PCR, real-time reverse transcription PCR; –, no samples tested. †Also adjusted for potential market differences for the 3 retail markets. ‡No influenza A(H7N9) virus was detected before market closure in wholesale markets, and data from this period were excluded from the regression model. §There were too few H7N9 virus–positive samples by culture in contaminated environmental sites in wholesale markets and DPM overall for us to estimate the effects. A simplified model was used for wholesale markets.
Influenza A(H7N9) virus identified in or on different environmental sites in 5 poultry markets under enhanced surveillance, Guangzhou, Guangdong Province, China, 2014*
| Environmental sites | No. samples/no. tested (%) |
*DPM, dressed poultry market; LPM, live poultry market; rRT-PCR, real-time reverse transcription PCR; –, no samples collected. †Because not all positive samples from rRT-PCR were available for virus culture, isolation rates were derived by using the product of the percentage of rRT-PCR–positive samples and the percentage of those samples that were also culture-positive. ‡These positive samples from rRT-PCR did not have sufficient material available for virus culture.
Figure 4Phylogenetic analysis of hemagglutinin genetic sequences of an influenza A(H7N9) virus isolated from an environmental sample collected at a retail live poultry market under enhanced surveillance, Guangzhou, China, 2014. Black circles indicate 3 strains collected before (February 13), during (February 15), and after (March 17) a 2-week market closure. Scale bar indicates base substitution per site.