| Literature DB >> 26396833 |
Gihaeng Kang1, Jineun Kim1, Eunjin Kwon1, Tae Ho Kim1.
Abstract
The title compound (systematic name: 1-{[2-(cyclo-propylcarbon-yl)anilino]sulfon-yl}-3-(4,6-di-meth-oxy-pyrimidin-2-yl)urea), C17H19N5O6S, is a pyrimidinyl-sulfonyl-urea herbicide. The dihedral angles between the mean planes of the central benzene ring and the cyclo-propyl and pyrimidinyl rings are 75.32 (9) and 88.79 (4)°, respectively. The C atoms of the meth-oxy groups lie almost in the plane of the pyrimidine ring [deviations = 0.043 (2) and 0.028 (2) Å] and intra-molecular N-H⋯N, N-H⋯O and C-H⋯O hydrogen bonds all close S(6) rings. In the crystal, N-H⋯O and C-H⋯O hydrogen bonds and weak π-π inter-actions [centroid-centroid distances = 3.6175 (9) and 3.7068 (9) Å] link adjacent mol-ecules, forming a three-dimensional network.Entities:
Keywords: crystal structure; hydrogen bonding; π–π interactions
Year: 2015 PMID: 26396833 PMCID: PMC4571433 DOI: 10.1107/S2056989015014115
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C17H19N5O6S | |
| Monoclinic, | Mo |
| Cell parameters from 6977 reflections | |
| θ = 2.6–27.4° | |
| µ = 0.22 mm−1 | |
| β = 93.6194 (12)° | |
| Block, colourless | |
| 0.32 × 0.27 × 0.23 mm |
| Bruker APEXII CCD diffractometer | 3688 reflections with |
| φ and ω scans | |
| Absorption correction: multi-scan ( | θmax = 27.5°, θmin = 2.0° |
| 17544 measured reflections | |
| 4365 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 4365 reflections | Δρmax = 0.22 e Å−3 |
| 264 parameters | Δρmin = −0.49 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| S1 | 1.03274 (3) | 0.41778 (4) | 0.19915 (2) | 0.02564 (12) | |
| O1 | 1.02757 (11) | 0.25129 (16) | −0.03440 (8) | 0.0524 (4) | |
| O2 | 1.12410 (9) | 0.48608 (12) | 0.17159 (7) | 0.0340 (3) | |
| O3 | 0.95254 (9) | 0.49585 (12) | 0.23699 (7) | 0.0343 (3) | |
| O4 | 1.19071 (9) | 0.18921 (12) | 0.19997 (7) | 0.0335 (3) | |
| O5 | 0.94327 (9) | 0.31556 (13) | 0.52112 (7) | 0.0386 (3) | |
| O6 | 1.17908 (10) | −0.04334 (14) | 0.61128 (7) | 0.0429 (3) | |
| N1 | 0.98567 (10) | 0.33405 (14) | 0.11638 (8) | 0.0290 (3) | |
| H1N | 1.0187 | 0.3456 | 0.0690 | 0.035* | |
| N2 | 1.06665 (10) | 0.30293 (14) | 0.27345 (8) | 0.0281 (3) | |
| H2N | 1.0317 | 0.3014 | 0.3203 | 0.034* | |
| N3 | 1.17533 (10) | 0.13526 (15) | 0.33969 (8) | 0.0303 (3) | |
| H3N | 1.2279 | 0.0767 | 0.3351 | 0.036* | |
| N4 | 1.05707 (10) | 0.22678 (14) | 0.43352 (8) | 0.0284 (3) | |
| N5 | 1.17993 (10) | 0.04736 (14) | 0.47520 (8) | 0.0302 (3) | |
| C1 | 1.00581 (16) | 0.0853 (2) | −0.18258 (11) | 0.0418 (4) | |
| H1A | 1.0695 | 0.1442 | −0.1740 | 0.050* | |
| H1B | 1.0162 | −0.0019 | −0.2147 | 0.050* | |
| C2 | 0.90252 (18) | 0.1560 (2) | −0.19567 (11) | 0.0492 (5) | |
| H2A | 0.8486 | 0.1127 | −0.2357 | 0.059* | |
| H2B | 0.9019 | 0.2589 | −0.1950 | 0.059* | |
| C3 | 0.93094 (14) | 0.08205 (17) | −0.11251 (10) | 0.0354 (4) | |
| H3 | 0.8943 | −0.0082 | −0.1031 | 0.042* | |
| C4 | 0.95231 (14) | 0.17112 (17) | −0.03618 (10) | 0.0334 (4) | |
| C5 | 0.88087 (12) | 0.16383 (17) | 0.03524 (10) | 0.0301 (3) | |
| C6 | 0.79319 (14) | 0.0755 (2) | 0.02989 (12) | 0.0415 (4) | |
| H6 | 0.7797 | 0.0215 | −0.0206 | 0.050* | |
| C7 | 0.72575 (15) | 0.0639 (2) | 0.09523 (13) | 0.0462 (5) | |
| H7 | 0.6672 | 0.0023 | 0.0901 | 0.055* | |
| C8 | 0.74454 (14) | 0.1432 (2) | 0.16818 (12) | 0.0432 (4) | |
| H8 | 0.6987 | 0.1354 | 0.2137 | 0.052* | |
| C9 | 0.82919 (13) | 0.23370 (19) | 0.17609 (10) | 0.0347 (4) | |
| H9 | 0.8403 | 0.2886 | 0.2264 | 0.042* | |
| C10 | 0.89805 (12) | 0.24451 (16) | 0.11062 (9) | 0.0267 (3) | |
| C11 | 1.14737 (12) | 0.20858 (16) | 0.26595 (9) | 0.0267 (3) | |
| C12 | 1.13446 (12) | 0.13831 (16) | 0.42007 (9) | 0.0272 (3) | |
| C13 | 1.01967 (12) | 0.22237 (17) | 0.51212 (9) | 0.0294 (3) | |
| C14 | 1.05796 (13) | 0.13144 (18) | 0.57482 (9) | 0.0325 (4) | |
| H14 | 1.0303 | 0.1274 | 0.6299 | 0.039* | |
| C15 | 1.13996 (13) | 0.04587 (18) | 0.55188 (10) | 0.0314 (3) | |
| C16 | 0.89737 (16) | 0.3201 (2) | 0.60284 (11) | 0.0514 (5) | |
| H16A | 0.8605 | 0.2326 | 0.6124 | 0.077* | |
| H16B | 0.8472 | 0.3974 | 0.6035 | 0.077* | |
| H16C | 0.9531 | 0.3336 | 0.6484 | 0.077* | |
| C17 | 1.26553 (16) | −0.1300 (2) | 0.58797 (12) | 0.0463 (5) | |
| H17A | 1.2435 | −0.1851 | 0.5372 | 0.069* | |
| H17B | 1.2862 | −0.1925 | 0.6357 | 0.069* | |
| H17C | 1.3256 | −0.0714 | 0.5752 | 0.069* |
| S1 | 0.0234 (2) | 0.0291 (2) | 0.02454 (19) | −0.00228 (14) | 0.00254 (14) | −0.00382 (13) |
| O1 | 0.0535 (9) | 0.0729 (10) | 0.0323 (6) | −0.0295 (7) | 0.0133 (6) | −0.0169 (6) |
| O2 | 0.0313 (6) | 0.0348 (6) | 0.0362 (6) | −0.0109 (5) | 0.0052 (5) | −0.0047 (5) |
| O3 | 0.0321 (6) | 0.0368 (6) | 0.0343 (6) | 0.0076 (5) | 0.0039 (5) | −0.0045 (5) |
| O4 | 0.0305 (6) | 0.0445 (7) | 0.0263 (5) | 0.0045 (5) | 0.0096 (4) | −0.0049 (5) |
| O5 | 0.0368 (7) | 0.0544 (8) | 0.0255 (6) | 0.0162 (6) | 0.0090 (5) | −0.0010 (5) |
| O6 | 0.0459 (8) | 0.0518 (8) | 0.0309 (6) | 0.0133 (6) | 0.0007 (5) | 0.0070 (5) |
| N1 | 0.0263 (7) | 0.0387 (7) | 0.0222 (6) | −0.0083 (6) | 0.0039 (5) | −0.0029 (5) |
| N2 | 0.0243 (7) | 0.0385 (7) | 0.0221 (6) | 0.0048 (5) | 0.0055 (5) | −0.0010 (5) |
| N3 | 0.0256 (7) | 0.0394 (7) | 0.0263 (6) | 0.0096 (6) | 0.0059 (5) | −0.0015 (5) |
| N4 | 0.0253 (7) | 0.0370 (7) | 0.0232 (6) | 0.0037 (5) | 0.0039 (5) | −0.0023 (5) |
| N5 | 0.0263 (7) | 0.0368 (7) | 0.0274 (6) | 0.0026 (6) | 0.0016 (5) | −0.0017 (5) |
| C1 | 0.0512 (11) | 0.0429 (10) | 0.0312 (8) | 0.0058 (8) | 0.0010 (8) | −0.0081 (7) |
| C2 | 0.0760 (15) | 0.0388 (10) | 0.0310 (9) | 0.0193 (10) | −0.0112 (9) | −0.0048 (7) |
| C3 | 0.0467 (10) | 0.0305 (8) | 0.0283 (8) | 0.0018 (7) | −0.0033 (7) | −0.0030 (6) |
| C4 | 0.0368 (9) | 0.0366 (9) | 0.0262 (7) | −0.0024 (7) | −0.0031 (6) | −0.0015 (6) |
| C5 | 0.0270 (8) | 0.0333 (8) | 0.0292 (7) | −0.0029 (6) | −0.0049 (6) | 0.0009 (6) |
| C6 | 0.0348 (10) | 0.0436 (10) | 0.0451 (10) | −0.0099 (8) | −0.0048 (8) | −0.0083 (8) |
| C7 | 0.0301 (9) | 0.0511 (11) | 0.0571 (11) | −0.0163 (8) | −0.0002 (8) | −0.0050 (9) |
| C8 | 0.0282 (9) | 0.0552 (11) | 0.0471 (10) | −0.0093 (8) | 0.0086 (7) | 0.0018 (9) |
| C9 | 0.0255 (8) | 0.0450 (10) | 0.0338 (8) | −0.0062 (7) | 0.0027 (6) | −0.0025 (7) |
| C10 | 0.0220 (7) | 0.0304 (8) | 0.0272 (7) | −0.0022 (6) | −0.0019 (6) | 0.0015 (6) |
| C11 | 0.0209 (7) | 0.0342 (8) | 0.0252 (7) | −0.0015 (6) | 0.0030 (5) | −0.0046 (6) |
| C12 | 0.0234 (7) | 0.0346 (8) | 0.0238 (7) | −0.0015 (6) | 0.0017 (6) | −0.0037 (6) |
| C13 | 0.0260 (8) | 0.0379 (8) | 0.0244 (7) | 0.0015 (6) | 0.0033 (6) | −0.0057 (6) |
| C14 | 0.0328 (9) | 0.0429 (9) | 0.0220 (7) | 0.0020 (7) | 0.0036 (6) | −0.0029 (6) |
| C15 | 0.0287 (8) | 0.0383 (9) | 0.0270 (7) | −0.0005 (7) | −0.0013 (6) | −0.0006 (6) |
| C16 | 0.0513 (12) | 0.0780 (15) | 0.0262 (8) | 0.0277 (11) | 0.0122 (8) | −0.0043 (9) |
| C17 | 0.0476 (11) | 0.0523 (11) | 0.0379 (9) | 0.0167 (9) | −0.0058 (8) | 0.0016 (8) |
| S1—O2 | 1.4237 (11) | C2—C3 | 1.505 (2) |
| S1—O3 | 1.4238 (11) | C2—H2A | 0.9900 |
| S1—N1 | 1.6065 (12) | C2—H2B | 0.9900 |
| S1—N2 | 1.6402 (13) | C3—C4 | 1.480 (2) |
| O1—C4 | 1.227 (2) | C3—H3 | 1.0000 |
| O4—C11 | 1.2132 (17) | C4—C5 | 1.484 (2) |
| O5—C13 | 1.3351 (19) | C5—C6 | 1.399 (2) |
| O5—C16 | 1.4372 (19) | C5—C10 | 1.416 (2) |
| O6—C15 | 1.3366 (19) | C6—C7 | 1.378 (3) |
| O6—C17 | 1.444 (2) | C6—H6 | 0.9500 |
| N1—C10 | 1.4058 (19) | C7—C8 | 1.379 (3) |
| N1—H1N | 0.8800 | C7—H7 | 0.9500 |
| N2—C11 | 1.3799 (19) | C8—C9 | 1.383 (2) |
| N2—H2N | 0.8800 | C8—H8 | 0.9500 |
| N3—C11 | 1.378 (2) | C9—C10 | 1.391 (2) |
| N3—C12 | 1.3890 (18) | C9—H9 | 0.9500 |
| N3—H3N | 0.8800 | C13—C14 | 1.379 (2) |
| N4—C12 | 1.327 (2) | C14—C15 | 1.392 (2) |
| N4—C13 | 1.3449 (19) | C14—H14 | 0.9500 |
| N5—C15 | 1.3303 (19) | C16—H16A | 0.9800 |
| N5—C12 | 1.333 (2) | C16—H16B | 0.9800 |
| C1—C2 | 1.480 (3) | C16—H16C | 0.9800 |
| C1—C3 | 1.495 (2) | C17—H17A | 0.9800 |
| C1—H1A | 0.9900 | C17—H17B | 0.9800 |
| C1—H1B | 0.9900 | C17—H17C | 0.9800 |
| O2—S1—O3 | 120.02 (7) | C7—C6—C5 | 122.31 (17) |
| O2—S1—N1 | 104.90 (7) | C7—C6—H6 | 118.8 |
| O3—S1—N1 | 111.04 (7) | C5—C6—H6 | 118.8 |
| O2—S1—N2 | 110.02 (7) | C6—C7—C8 | 118.96 (17) |
| O3—S1—N2 | 102.97 (7) | C6—C7—H7 | 120.5 |
| N1—S1—N2 | 107.42 (7) | C8—C7—H7 | 120.5 |
| C13—O5—C16 | 116.90 (13) | C7—C8—C9 | 120.99 (17) |
| C15—O6—C17 | 116.82 (13) | C7—C8—H8 | 119.5 |
| C10—N1—S1 | 127.72 (10) | C9—C8—H8 | 119.5 |
| C10—N1—H1N | 116.1 | C8—C9—C10 | 120.18 (16) |
| S1—N1—H1N | 116.1 | C8—C9—H9 | 119.9 |
| C11—N2—S1 | 123.13 (10) | C10—C9—H9 | 119.9 |
| C11—N2—H2N | 118.4 | C9—C10—N1 | 122.06 (14) |
| S1—N2—H2N | 118.4 | C9—C10—C5 | 119.97 (14) |
| C11—N3—C12 | 130.81 (13) | N1—C10—C5 | 117.98 (13) |
| C11—N3—H3N | 114.6 | O4—C11—N3 | 121.65 (14) |
| C12—N3—H3N | 114.6 | O4—C11—N2 | 123.54 (14) |
| C12—N4—C13 | 115.60 (13) | N3—C11—N2 | 114.81 (12) |
| C15—N5—C12 | 114.47 (13) | N4—C12—N5 | 127.86 (14) |
| C2—C1—C3 | 60.76 (12) | N4—C12—N3 | 118.65 (14) |
| C2—C1—H1A | 117.7 | N5—C12—N3 | 113.49 (13) |
| C3—C1—H1A | 117.7 | O5—C13—N4 | 112.08 (13) |
| C2—C1—H1B | 117.7 | O5—C13—C14 | 125.27 (14) |
| C3—C1—H1B | 117.7 | N4—C13—C14 | 122.65 (14) |
| H1A—C1—H1B | 114.8 | C13—C14—C15 | 115.36 (14) |
| C1—C2—C3 | 60.10 (12) | C13—C14—H14 | 122.3 |
| C1—C2—H2A | 117.8 | C15—C14—H14 | 122.3 |
| C3—C2—H2A | 117.8 | N5—C15—O6 | 119.06 (15) |
| C1—C2—H2B | 117.8 | N5—C15—C14 | 124.04 (15) |
| C3—C2—H2B | 117.8 | O6—C15—C14 | 116.89 (14) |
| H2A—C2—H2B | 114.9 | O5—C16—H16A | 109.5 |
| C4—C3—C1 | 119.02 (16) | O5—C16—H16B | 109.5 |
| C4—C3—C2 | 116.34 (14) | H16A—C16—H16B | 109.5 |
| C1—C3—C2 | 59.14 (12) | O5—C16—H16C | 109.5 |
| C4—C3—H3 | 116.6 | H16A—C16—H16C | 109.5 |
| C1—C3—H3 | 116.6 | H16B—C16—H16C | 109.5 |
| C2—C3—H3 | 116.6 | O6—C17—H17A | 109.5 |
| O1—C4—C3 | 119.04 (15) | O6—C17—H17B | 109.5 |
| O1—C4—C5 | 121.68 (14) | H17A—C17—H17B | 109.5 |
| C3—C4—C5 | 119.26 (15) | O6—C17—H17C | 109.5 |
| C6—C5—C10 | 117.59 (15) | H17A—C17—H17C | 109.5 |
| C6—C5—C4 | 120.40 (15) | H17B—C17—H17C | 109.5 |
| C10—C5—C4 | 122.01 (14) | ||
| O2—S1—N1—C10 | 176.89 (13) | C4—C5—C10—C9 | −179.69 (15) |
| O3—S1—N1—C10 | −52.05 (15) | C6—C5—C10—N1 | −179.72 (15) |
| N2—S1—N1—C10 | 59.84 (15) | C4—C5—C10—N1 | 0.3 (2) |
| O2—S1—N2—C11 | −47.34 (14) | C12—N3—C11—O4 | −177.90 (15) |
| O3—S1—N2—C11 | −176.41 (12) | C12—N3—C11—N2 | 1.5 (2) |
| N1—S1—N2—C11 | 66.31 (13) | S1—N2—C11—O4 | −10.3 (2) |
| C2—C1—C3—C4 | −105.05 (18) | S1—N2—C11—N3 | 170.31 (11) |
| C1—C2—C3—C4 | 109.56 (18) | C13—N4—C12—N5 | −0.8 (2) |
| C1—C3—C4—O1 | 4.1 (2) | C13—N4—C12—N3 | 178.68 (14) |
| C2—C3—C4—O1 | −63.6 (2) | C15—N5—C12—N4 | 1.3 (2) |
| C1—C3—C4—C5 | −177.36 (15) | C15—N5—C12—N3 | −178.23 (14) |
| C2—C3—C4—C5 | 114.96 (19) | C11—N3—C12—N4 | −2.0 (2) |
| O1—C4—C5—C6 | 177.40 (17) | C11—N3—C12—N5 | 177.54 (15) |
| C3—C4—C5—C6 | −1.1 (2) | C16—O5—C13—N4 | −179.99 (16) |
| O1—C4—C5—C10 | −2.6 (3) | C16—O5—C13—C14 | −0.3 (2) |
| C3—C4—C5—C10 | 178.88 (14) | C12—N4—C13—O5 | 179.06 (13) |
| C10—C5—C6—C7 | −1.0 (3) | C12—N4—C13—C14 | −0.6 (2) |
| C4—C5—C6—C7 | 179.00 (18) | O5—C13—C14—C15 | −178.31 (15) |
| C5—C6—C7—C8 | 0.7 (3) | N4—C13—C14—C15 | 1.3 (2) |
| C6—C7—C8—C9 | 0.4 (3) | C12—N5—C15—O6 | 178.96 (14) |
| C7—C8—C9—C10 | −1.0 (3) | C12—N5—C15—C14 | −0.4 (2) |
| C8—C9—C10—N1 | −179.31 (16) | C17—O6—C15—N5 | 1.8 (2) |
| C8—C9—C10—C5 | 0.7 (3) | C17—O6—C15—C14 | −178.78 (15) |
| S1—N1—C10—C9 | 10.3 (2) | C13—C14—C15—N5 | −0.8 (2) |
| S1—N1—C10—C5 | −169.74 (12) | C13—C14—C15—O6 | 179.85 (15) |
| C6—C5—C10—C9 | 0.3 (2) |
| H··· | ||||
| N1—H1 | 0.88 | 1.86 | 2.5736 (18) | 137 |
| N2—H2 | 0.88 | 1.92 | 2.6158 (18) | 135 |
| C9—H9···O3 | 0.95 | 2.45 | 3.088 (2) | 124 |
| N3—H3 | 0.88 | 2.08 | 2.9391 (17) | 165 |
| C2—H2 | 0.99 | 2.51 | 3.483 (2) | 169 |
| C3—H3···O4iii | 1.00 | 2.51 | 3.286 (2) | 135 |
| C8—H8···O3iv | 0.95 | 2.50 | 3.307 (2) | 142 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| N1H1 | 0.88 | 1.86 | 2.5736(18) | 137 |
| N2H2 | 0.88 | 1.92 | 2.6158(18) | 135 |
| C9H9O3 | 0.95 | 2.45 | 3.088(2) | 124 |
| N3H3 | 0.88 | 2.08 | 2.9391(17) | 165 |
| C2H2 | 0.99 | 2.51 | 3.483(2) | 169 |
| C3H3O4iii | 1.00 | 2.51 | 3.286(2) | 135 |
| C8H8O3iv | 0.95 | 2.50 | 3.307(2) | 142 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .