Literature DB >> 26393966

Brachypodium distachyon as a Genetic Model System.

Elizabeth A Kellogg1.   

Abstract

Brachypodium distachyon has emerged as a powerful model system for studying the genetics of flowering plants. Originally chosen for its phylogenetic proximity to the large-genome cereal crops wheat and barley, it is proving to be useful for more than simply providing markers for comparative mapping. Studies in B. distachyon have provided new insight into the structure and physiology of plant cell walls, the development and chemical composition of endosperm, and the genetic basis for cold tolerance. Recent work on auxin transport has uncovered mechanisms that apply to all angiosperms other than Arabidopsis. In addition to the areas in which it is currently used, B. distachyon is uniquely suited for studies of floral development, vein patterning, the controls of the perennial versus annual habit, and genome organization.

Entities:  

Keywords:  auxin; cell walls; cold tolerance; endosperm; genome; vernalization

Mesh:

Year:  2015        PMID: 26393966     DOI: 10.1146/annurev-genet-112414-055135

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  18 in total

1.  Morpho-histological, histochemical, and molecular evidences related to cellular reprogramming during somatic embryogenesis of the model grass Brachypodium distachyon.

Authors:  Evelyn Jardim Oliveira; Andréa Dias Koehler; Diego Ismael Rocha; Lorena Melo Vieira; Marcos Vinícius Marques Pinheiro; Elyabe Monteiro de Matos; Ana Claudia Ferreira da Cruz; Thais Cristina Ribeiro da Silva; Francisco André Ossamu Tanaka; Fabio Tebaldi Silveira Nogueira; Wagner Campos Otoni
Journal:  Protoplasma       Date:  2017-03-13       Impact factor: 3.356

2.  Live Confocal Imaging of Brachypodium Spikelet Meristems.

Authors:  Devin Lee O'Connor
Journal:  Bio Protoc       Date:  2018-09-20

3.  Improving bread wheat yield through modulating an unselected AP2/ERF gene.

Authors:  Yuange Wang; Fei Du; Jian Wang; Ke Wang; Caihuan Tian; Xiaoquan Qi; Fei Lu; Xigang Liu; Xingguo Ye; Yuling Jiao
Journal:  Nat Plants       Date:  2022-07-18       Impact factor: 17.352

Review 4.  Brachypodium: A Monocot Grass Model Genus for Plant Biology.

Authors:  Karen-Beth G Scholthof; Sonia Irigoyen; Pilar Catalan; Kranthi K Mandadi
Journal:  Plant Cell       Date:  2018-07-11       Impact factor: 11.277

5.  Diurnal Transcriptome and Gene Network Represented through Sparse Modeling in Brachypodium distachyon.

Authors:  Satoru Koda; Yoshihiko Onda; Hidetoshi Matsui; Kotaro Takahagi; Yukiko Yamaguchi-Uehara; Minami Shimizu; Komaki Inoue; Takuhiro Yoshida; Tetsuya Sakurai; Hiroshi Honda; Shinto Eguchi; Ryuei Nishii; Keiichi Mochida
Journal:  Front Plant Sci       Date:  2017-11-28       Impact factor: 5.753

6.  Salicylic acid-dependent immunity contributes to resistance against Rhizoctonia solani, a necrotrophic fungal agent of sheath blight, in rice and Brachypodium distachyon.

Authors:  Yusuke Kouzai; Mamiko Kimura; Megumi Watanabe; Kazuki Kusunoki; Daiki Osaka; Tomoko Suzuki; Hidenori Matsui; Mikihiro Yamamoto; Yuki Ichinose; Kazuhiro Toyoda; Takakazu Matsuura; Izumi C Mori; Takashi Hirayama; Eiichi Minami; Yoko Nishizawa; Komaki Inoue; Yoshihiko Onda; Keiichi Mochida; Yoshiteru Noutoshi
Journal:  New Phytol       Date:  2017-10-19       Impact factor: 10.151

7.  Unraveling the Transcriptional Basis of Temperature-Dependent Pinoxaden Resistance in Brachypodium hybridum.

Authors:  Maor Matzrafi; Lidor Shaar-Moshe; Baruch Rubin; Zvi Peleg
Journal:  Front Plant Sci       Date:  2017-06-21       Impact factor: 5.753

8.  Overexpression of BdMATE Gene Improves Aluminum Tolerance in Setaria viridis.

Authors:  Ana P Ribeiro; Wagner R de Souza; Polyana K Martins; Felipe Vinecky; Karoline E Duarte; Marcos F Basso; Bárbara A D B da Cunha; Raquel B Campanha; Patrícia A de Oliveira; Danilo C Centeno; Geraldo M A Cançado; Jurandir V de Magalhães; Carlos A F de Sousa; Alan C Andrade; Adilson K Kobayashi; Hugo B C Molinari
Journal:  Front Plant Sci       Date:  2017-06-08       Impact factor: 5.753

9.  Multiplex PCR Targeted Amplicon Sequencing (MTA-Seq): Simple, Flexible, and Versatile SNP Genotyping by Highly Multiplexed PCR Amplicon Sequencing.

Authors:  Yoshihiko Onda; Kotaro Takahagi; Minami Shimizu; Komaki Inoue; Keiichi Mochida
Journal:  Front Plant Sci       Date:  2018-03-23       Impact factor: 5.753

10.  Characterization of the LBD gene family in Brachypodium: a phylogenetic and transcriptional study.

Authors:  Magdolna Gombos; Zoltán Zombori; Mária Szécsényi; Györgyi Sándor; Hajnalka Kovács; János Györgyey
Journal:  Plant Cell Rep       Date:  2016-09-29       Impact factor: 4.570

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