Literature DB >> 26393800

Reader reaction: A note on the evaluation of group testing algorithms in the presence of misclassification.

Yaakov Malinovsky1, Paul S Albert2, Anindya Roy1.   

Abstract

In the context of group testing screening, McMahan, Tebbs, and Bilder (2012, Biometrics 68, 287-296) proposed a two-stage procedure in a heterogenous population in the presence of misclassification. In earlier work published in Biometrics, Kim, Hudgens, Dreyfuss, Westreich, and Pilcher (2007, Biometrics 63, 1152-1162) also proposed group testing algorithms in a homogeneous population with misclassification. In both cases, the authors evaluated performance of the algorithms based on the expected number of tests per person, with the optimal design being defined by minimizing this quantity. The purpose of this article is to show that although the expected number of tests per person is an appropriate evaluation criteria for group testing when there is no misclassification, it may be problematic when there is misclassification. Specifically, a valid criterion needs to take into account the amount of correct classification and not just the number of tests. We propose, a more suitable objective function that accounts for not only the expected number of tests, but also the expected number of correct classifications. We then show how using this objective function that accounts for correct classification is important for design when considering group testing under misclassification. We also present novel analytical results which characterize the optimal Dorfman (1943) design under the misclassification.
© 2015, The International Biometric Society.

Entities:  

Keywords:  Dorfman two-stage procedure; Group testing; Optimum group size; Sensitivity; Specificity

Mesh:

Year:  2015        PMID: 26393800     DOI: 10.1111/biom.12385

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  8 in total

1.  Group testing case identification with biomarker information.

Authors:  Dewei Wang; Christopher S McMahan; Joshua M Tebbs; Christopher R Bilder
Journal:  Comput Stat Data Anal       Date:  2018-02-01       Impact factor: 1.681

2.  Revisiting Nested Group Testing Procedures: New Results, Comparisons, and Robustness.

Authors:  Yaakov Malinovsky; Paul S Albert
Journal:  Am Stat       Date:  2018-06-04       Impact factor: 8.710

3.  The objective function controversy for group testing: Much ado about nothing?

Authors:  Brianna D Hitt; Christopher R Bilder; Joshua M Tebbs; Christopher S McMahan
Journal:  Stat Med       Date:  2019-08-30       Impact factor: 2.373

4.  Simulation of group testing scenarios can boost COVID-19 screening power.

Authors:  Vinicius Henrique da Silva; Carolina Purcell Goes; Priscila Anchieta Trevisoli; Raquel Lello; Luan Gaspar Clemente; Talita Bonato de Almeida; Juliana Petrini; Luiz Lehmann Coutinho
Journal:  Sci Rep       Date:  2022-07-13       Impact factor: 4.996

5.  Hierarchical group testing for multiple infections.

Authors:  Peijie Hou; Joshua M Tebbs; Christopher R Bilder; Christopher S McMahan
Journal:  Biometrics       Date:  2016-09-22       Impact factor: 2.571

6.  Is group testing ready for prime-time in disease identification?

Authors:  Gregory Haber; Yaakov Malinovsky; Paul S Albert
Journal:  Stat Med       Date:  2021-04-28       Impact factor: 2.497

7.  Pooled testing of traced contacts under superspreading dynamics.

Authors:  Stratis Tsirtsis; Abir De; Lars Lorch; Manuel Gomez-Rodriguez
Journal:  PLoS Comput Biol       Date:  2022-03-28       Impact factor: 4.475

8.  Network-Informed Constrained Divisive Pooled Testing Assignments.

Authors:  Daniel K Sewell
Journal:  Front Big Data       Date:  2022-07-08
  8 in total

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