Literature DB >> 26386044

Mutations in human homologue of chicken talpid3 gene (KIAA0586) cause a hybrid ciliopathy with overlapping features of Jeune and Joubert syndromes.

May Christine V Malicdan1, Thierry Vilboux2, Joshi Stephen3, Dino Maglic3, Luhe Mian3, Daniel Konzman3, Jennifer Guo3, Deniz Yildirimli3, Joy Bryant3, Roxanne Fischer3, Wadih M Zein4, Joseph Snow5, Meghana Vemulapalli6, James C Mullikin6, Camilo Toro7, Benjamin D Solomon8, John E Niederhuber9, William A Gahl10, Meral Gunay-Aygun11.   

Abstract

BACKGROUND: In chicken, loss of TALPID3 results in non-functional cilia and short-rib polydactyly syndrome. This phenotype is caused by a frameshift mutation in the chicken ortholog of the human KIAA0586 gene, which encodes a novel coiled-coil domain protein essential for primary ciliogenesis, suggesting that KIAA0586 can be associated with ciliopathy in human beings.
METHODS: In our patients with ciliopathy (http://www.clinicaltrials.gov: NCT00068224), we have collected extensive clinical and neuroimaging data from affected individuals, and performed whole exome sequencing on DNA from affected individuals and their parents. We analysed gene expression on fibroblast cell line, and determined the effect of gene mutation on ciliogenesis in cells derived from patients.
RESULTS: We identified biallelic mutations in the human TALPID3 ortholog, KIAA0586, in six children with findings of overlapping Jeune and Joubert syndromes. Fibroblasts cultured from one of the patients with Jeune-Joubert syndrome exhibited more severe cilia defects than fibroblasts from patients with only Joubert syndrome; this difference was reflected in KIAA0586 RNA expression levels. Rescue of the cilia defect with full-length wild type KIAA0586 indicated a causal link between cilia formation and KIAA0586 function.
CONCLUSIONS: Our results show that biallelic deleterious mutations in KIAA0586 lead to Joubert syndrome with or without Jeune asphyxiating thoracic dystrophy. Furthermore, our results confirm that KIAA0586/TALPID3 is essential in cilia formation in human beings, expand the KIAA0586 phenotype to include features of Jeune syndrome and provide a pathogenetic connection between Joubert and Jeune syndromes, based on aberrant ciliogenesis. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/

Entities:  

Keywords:  Clinical genetics; Developmental; ciliopathy; small thorax; whole exome sequencing

Mesh:

Substances:

Year:  2015        PMID: 26386044      PMCID: PMC5517294          DOI: 10.1136/jmedgenet-2015-103316

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   6.318


  29 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  Ataxia, intellectual disability, and ocular apraxia with cerebellar cysts: a new disease?

Authors:  Andrea Poretti; Martin Häusler; Arpad von Moers; Bastian Baumgartner; Klaus Zerres; Andrea Klein; Chiara Aiello; Francesca Moro; Ginevra Zanni; Filippo M Santorelli; Thierry A G M Huisman; Joachim Weis; Enza Maria Valente; Enrico Bertini; Eugen Boltshauser
Journal:  Cerebellum       Date:  2014-02       Impact factor: 3.847

3.  Failure of centrosome migration causes a loss of motile cilia in talpid(3) mutants.

Authors:  Louise A Stephen; Gemma M Davis; Katie E McTeir; John James; Lynn McTeir; Martin Kierans; Andrew Bain; Megan G Davey
Journal:  Dev Dyn       Date:  2013-06-11       Impact factor: 3.780

Review 4.  Joubert syndrome: congenital cerebellar ataxia with the molar tooth.

Authors:  Marta Romani; Alessia Micalizzi; Enza Maria Valente
Journal:  Lancet Neurol       Date:  2013-07-17       Impact factor: 44.182

5.  Generation of mice with functional inactivation of talpid3, a gene first identified in chicken.

Authors:  Fiona Bangs; Nicole Antonio; Peerapat Thongnuek; Monique Welten; Megan G Davey; James Briscoe; Cheryll Tickle
Journal:  Development       Date:  2011-08       Impact factor: 6.868

6.  Expression of ptc and gli genes in talpid3 suggests bifurcation in Shh pathway.

Authors:  K E Lewis; G Drossopoulou; I R Paton; D R Morrice; K E Robertson; D W Burt; P W Ingham; C Tickle
Journal:  Development       Date:  1999-06       Impact factor: 6.868

Review 7.  Exome sequencing: the sweet spot before whole genomes.

Authors:  Jamie K Teer; James C Mullikin
Journal:  Hum Mol Genet       Date:  2010-08-12       Impact factor: 6.150

8.  Homozygosity mapping and whole-exome sequencing to detect SLC45A2 and G6PC3 mutations in a single patient with oculocutaneous albinism and neutropenia.

Authors:  Andrew R Cullinane; Thierry Vilboux; Kevin O'Brien; James A Curry; Dawn M Maynard; Hannah Carlson-Donohoe; Carla Ciccone; Thomas C Markello; Meral Gunay-Aygun; Marjan Huizing; William A Gahl
Journal:  J Invest Dermatol       Date:  2011-06-16       Impact factor: 8.551

9.  Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing.

Authors:  Andreas Gnirke; Alexandre Melnikov; Jared Maguire; Peter Rogov; Emily M LeProust; William Brockman; Timothy Fennell; Georgia Giannoukos; Sheila Fisher; Carsten Russ; Stacey Gabriel; David B Jaffe; Eric S Lander; Chad Nusbaum
Journal:  Nat Biotechnol       Date:  2009-02-01       Impact factor: 54.908

10.  The CP110-interacting proteins Talpid3 and Cep290 play overlapping and distinct roles in cilia assembly.

Authors:  Tetsuo Kobayashi; Sehyun Kim; Yu-Chun Lin; Takanari Inoue; Brian David Dynlacht
Journal:  J Cell Biol       Date:  2014-01-13       Impact factor: 10.539

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  32 in total

1.  Deleterious variants in TRAK1 disrupt mitochondrial movement and cause fatal encephalopathy.

Authors:  Ortal Barel; May Christine V Malicdan; Bruria Ben-Zeev; Judith Kandel; Hadass Pri-Chen; Joshi Stephen; Inês G Castro; Jeremy Metz; Osama Atawa; Sharon Moshkovitz; Esther Ganelin; Iris Barshack; Sylvie Polak-Charcon; Dvora Nass; Dina Marek-Yagel; Ninette Amariglio; Nechama Shalva; Thierry Vilboux; Carlos Ferreira; Ben Pode-Shakked; Gali Heimer; Chen Hoffmann; Tal Yardeni; Andreea Nissenkorn; Camila Avivi; Eran Eyal; Nitzan Kol; Efrat Glick Saar; Douglas C Wallace; William A Gahl; Gideon Rechavi; Michael Schrader; David M Eckmann; Yair Anikster
Journal:  Brain       Date:  2017-03-01       Impact factor: 13.501

Review 2.  Ciliopathies.

Authors:  Daniela A Braun; Friedhelm Hildebrandt
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-03-01       Impact factor: 10.005

3.  Lysosomal Storage and Albinism Due to Effects of a De Novo CLCN7 Variant on Lysosomal Acidification.

Authors:  Elena-Raluca Nicoli; Mary R Weston; Mary Hackbarth; Alissa Becerril; Austin Larson; Wadih M Zein; Peter R Baker; John Douglas Burke; Heidi Dorward; Mariska Davids; Yan Huang; David R Adams; Patricia M Zerfas; Dong Chen; Thomas C Markello; Camilo Toro; Tim Wood; Gene Elliott; Mylinh Vu; Wei Zheng; Lisa J Garrett; Cynthia J Tifft; William A Gahl; Debra L Day-Salvatore; Joseph A Mindell; May Christine V Malicdan
Journal:  Am J Hum Genet       Date:  2019-05-30       Impact factor: 11.025

Review 4.  Primary cilia proteins: ciliary and extraciliary sites and functions.

Authors:  Kiet Hua; Russell J Ferland
Journal:  Cell Mol Life Sci       Date:  2018-01-05       Impact factor: 9.261

Review 5.  Healthcare recommendations for Joubert syndrome.

Authors:  Ruxandra Bachmann-Gagescu; Jennifer C Dempsey; Sara Bulgheroni; Maida L Chen; Stefano D'Arrigo; Ian A Glass; Theo Heller; Elise Héon; Friedhelm Hildebrandt; Nirmal Joshi; Dana Knutzen; Hester Y Kroes; Stephen H Mack; Sara Nuovo; Melissa A Parisi; Joseph Snow; Angela C Summers; Jordan M Symons; Wadih M Zein; Eugen Boltshauser; John A Sayer; Meral Gunay-Aygun; Enza Maria Valente; Dan Doherty
Journal:  Am J Med Genet A       Date:  2019-11-11       Impact factor: 2.802

6.  A novel inborn error of the coenzyme Q10 biosynthesis pathway: cerebellar ataxia and static encephalomyopathy due to COQ5 C-methyltransferase deficiency.

Authors:  May Christine V Malicdan; Thierry Vilboux; Bruria Ben-Zeev; Jennifer Guo; Aviva Eliyahu; Ben Pode-Shakked; Amir Dori; Sravan Kakani; Settara C Chandrasekharappa; Carlos R Ferreira; Natalia Shelestovich; Dina Marek-Yagel; Hadass Pri-Chen; Ilan Blatt; John E Niederhuber; Langping He; Camilo Toro; Robert W Taylor; John Deeken; Tal Yardeni; Douglas C Wallace; William A Gahl; Yair Anikster
Journal:  Hum Mutat       Date:  2017-11-08       Impact factor: 4.878

7.  An inactivating mutation in intestinal cell kinase, ICK, impairs hedgehog signalling and causes short rib-polydactyly syndrome.

Authors:  S Paige Taylor; Michaela Kunova Bosakova; Miroslav Varecha; Lukas Balek; Tomas Barta; Lukas Trantirek; Iva Jelinkova; Ivan Duran; Iva Vesela; Kimberly N Forlenza; Jorge H Martin; Ales Hampl; Michael Bamshad; Deborah Nickerson; Margie L Jaworski; Jieun Song; Hyuk Wan Ko; Daniel H Cohn; Deborah Krakow; Pavel Krejci
Journal:  Hum Mol Genet       Date:  2016-07-27       Impact factor: 6.150

8.  Defective ciliogenesis in INPP5E-related Joubert syndrome.

Authors:  Isabel Hardee; Ariane Soldatos; Mariska Davids; Thierry Vilboux; Camilo Toro; Karen L David; Carlos R Ferreira; Michele Nehrebecky; Joseph Snow; Audrey Thurm; Theo Heller; Ellen F Macnamara; Meral Gunay-Aygun; Wadih M Zein; William A Gahl; May Christine V Malicdan
Journal:  Am J Med Genet A       Date:  2017-10-20       Impact factor: 2.802

Review 9.  ARL3, a small GTPase with a functionally conserved role in primary cilia and immune synapses.

Authors:  Laura Powell; Youhani H Samarakoon; Shehab Ismail; John A Sayer
Journal:  Small GTPases       Date:  2019-12-18

10.  Joubert Syndrome: Ophthalmological Findings in Correlation with Genotype and Hepatorenal Disease in 99 Patients Prospectively Evaluated at a Single Center.

Authors:  Brian P Brooks; Wadih M Zein; Amy H Thompson; Maryam Mokhtarzadeh; Daniel A Doherty; Melissa Parisi; Ian A Glass; May C Malicdan; Thierry Vilboux; Meghana Vemulapalli; James C Mullikin; William A Gahl; Meral Gunay-Aygun
Journal:  Ophthalmology       Date:  2018-07-25       Impact factor: 12.079

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