Literature DB >> 26385704

The role of an L-leucine residue on the conformations of glycyl-L-leucine oligomers and its N- or C-terminal dependence: infrared absorption and Raman scattering studies.

Hiro-Fumi Okabayashi1, Hide-Hiro Kanbe2, Charmian J O'Connor3.   

Abstract

The conformations of glycyl-L-leucine oligomers (GnL, residue number n = 3, 4, and 5) in the solid state were found to be similar to that of a polyglycine II (PGII). However, for L-leucyl-glycine oligomers (LGn; n = 3, 4, 5) in the solid state, LG3 and LG4 have already been confirmed to take a reverse-turn structure (LG3-type reverse-turn) while LG5 adopts a PGII-type helix. The present results provide evidence that the conformations of L-leucine-containing glycine oligomers depend strongly upon whether the L-leucine residue is placed in the N- or C-terminal position. For the aqueous G3L and G4L samples, we assumed that reverse-turn structures similar to the type II β-turn, rather than the LG3-type reverse-turn, are stabilized in concentrated solution, probably as the result of aggregation. Models to explain the mechanism of these phenomena are presented.

Entities:  

Keywords:  Glycyl-L-leucine oligomers; Helical structure; L-leucine; LG3-type reverse-turn; N- or C-terminal-dependence

Mesh:

Substances:

Year:  2015        PMID: 26385704     DOI: 10.1007/s00249-015-1072-3

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  35 in total

Review 1.  Protein folding and misfolding.

Authors:  Christopher M Dobson
Journal:  Nature       Date:  2003-12-18       Impact factor: 49.962

2.  Structure of polyglycine.

Authors:  W T ASTBURY
Journal:  Nature       Date:  1949-05-07       Impact factor: 49.962

3.  Conformation of [Leu5]enkephalin from X-ray diffraction: features important for recognition at opiate receptor.

Authors:  D Smith; J F Griffin
Journal:  Science       Date:  1978-03-17       Impact factor: 47.728

4.  Structural patterns in globular proteins.

Authors:  M Levitt; C Chothia
Journal:  Nature       Date:  1976-06-17       Impact factor: 49.962

5.  Development of α-helical calpain probes by mimicking a natural protein-protein interaction.

Authors:  Hyunil Jo; Nataline Meinhardt; Yibing Wu; Swapnil Kulkarni; Xiaozhen Hu; Kristin E Low; Peter L Davies; William F DeGrado; Doron C Greenbaum
Journal:  J Am Chem Soc       Date:  2012-10-11       Impact factor: 15.419

Review 6.  The formation and stabilization of protein structure.

Authors:  C B Anfinsen
Journal:  Biochem J       Date:  1972-07       Impact factor: 3.857

7.  Conformations of model compounds of proteins. I. Acetylglycine N-methylamide.

Authors:  Y Koyama; T Shimanouchi
Journal:  Biopolymers       Date:  1968       Impact factor: 2.505

8.  Solid state conformation of the C-terminal tripeptide of oxytocin, L-Pro-L-Leu-Gly-NH2 0.5H2O.

Authors:  L L Reed; P L Johnson
Journal:  J Am Chem Soc       Date:  1973-10-31       Impact factor: 15.419

9.  Folded structures of L-leucylglycine oligopeptides and their aggregational behavior in aqueous solution: Raman scattering spectra and proton NMR spin-lattice relaxation studies.

Authors:  Aki-Hiro Yoshino; Hiro-Fumi Okabayashi; Hide-Hiro Kanbe; Keita Suzuki; Charmian J O'Connor
Journal:  J Phys Chem B       Date:  2008-04-12       Impact factor: 2.991

10.  Crystal structure and conformation of polypeptides: L-leucylglycylglycylglycine.

Authors:  T Srikrishnan; R Parthasarathy
Journal:  Int J Pept Protein Res       Date:  1987-10
View more
  1 in total

1.  Fourier-transform infrared spectroscopy for monitoring proteolytic reactions using dry-films treated with trifluoroacetic acid.

Authors:  Kenneth Aase Kristoffersen; Aart van Amerongen; Ulrike Böcker; Diana Lindberg; Sileshi Gizachew Wubshet; Heleen de Vogel-van den Bosch; Svein Jarle Horn; Nils Kristian Afseth
Journal:  Sci Rep       Date:  2020-05-12       Impact factor: 4.379

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.