Literature DB >> 26382049

Correlated spectroscopic imaging of calf muscle in three spatial dimensions using group sparse reconstruction of undersampled single and multichannel data.

Neil E Wilson1, Brian L Burns1, Zohaib Iqbal1, M Albert Thomas1.   

Abstract

PURPOSE: To implement a 5D (three spatial + two spectral) correlated spectroscopic imaging sequence for application to human calf. THEORY AND METHODS: Nonuniform sampling was applied across the two phase encoded dimensions and the indirect spectral dimension of an echo planar-correlated spectroscopic imaging sequence. Reconstruction was applied that minimized the group sparse mixed ℓ2,1-norm of the data. Multichannel data were compressed using a sensitivity map-based approach with a spatially dependent transform matrix and utilized the self-sparsity of the individual coil images to simplify the reconstruction.
RESULTS: Single channel data with 8× and 16× undersampling are shown in the calf of a diabetic patient. A 15-channel scan with 12× undersampling of a healthy volunteer was reconstructed using 5 virtual channels and compared to a fully sampled single slice scan. Group sparse reconstruction faithfully reconstructs the lipid cross peaks much better than ℓ1 minimization.
CONCLUSION: COSY spectra can be acquired over a 3D spatial volume with scan time under 15 min using echo planar readout with highly undersampled data and group sparse reconstruction.
© 2015 Wiley Periodicals, Inc.

Entities:  

Keywords:  3D spectroscopic imaging; EP-COSI; calf muscle; compressed sensing; group sparsity; nonuniform sampling

Mesh:

Year:  2015        PMID: 26382049      PMCID: PMC4619112          DOI: 10.1002/mrm.25988

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  34 in total

1.  Localized two-dimensional shift correlated MR spectroscopy of human brain.

Authors:  M A Thomas; K Yue; N Binesh; P Davanzo; A Kumar; B Siegel; M Frye; J Curran; R Lufkin; P Martin; B Guze
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2.  Array compression for MRI with large coil arrays.

Authors:  Martin Buehrer; Klaas P Pruessmann; Peter Boesiger; Sebastian Kozerke
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Authors:  Dong Liang; Bo Liu; Jiunjie Wang; Leslie Ying
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4.  k-t Group sparse: a method for accelerating dynamic MRI.

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Journal:  Magn Reson Med       Date:  2011-03-09       Impact factor: 4.668

5.  Correction of phase effects produced by eddy currents in solvent suppressed 1H-CSI.

Authors:  J R Roebuck; D O Hearshen; M O'Donnell; T Raidy
Journal:  Magn Reson Med       Date:  1993-09       Impact factor: 4.668

6.  Three-dimensional echo-planar MR spectroscopic imaging at short echo times in the human brain.

Authors:  S Posse; C DeCarli; D Le Bihan
Journal:  Radiology       Date:  1994-09       Impact factor: 11.105

7.  Liquid-crystal-like structures of human muscle demonstrated by in vivo observation of direct dipolar coupling in localized proton magnetic resonance spectroscopy.

Authors:  R Kreis; C Boesch
Journal:  J Magn Reson B       Date:  1994-06

8.  Localized two-dimensional shift correlated spectroscopy in humans at 2 Tesla.

Authors:  I M Brereton; G J Galloway; S E Rose; D M Doddrell
Journal:  Magn Reson Med       Date:  1994-08       Impact factor: 4.668

9.  Correlation-peak imaging.

Authors:  A Ziegler; A Metzler; W Köckenberger; M Izquierdo; E Komor; A Haase; M Décorps; M von Kienlin
Journal:  J Magn Reson B       Date:  1996-08

10.  Non-uniformly under-sampled multi-dimensional spectroscopic imaging in vivo: maximum entropy versus compressed sensing reconstruction.

Authors:  Brian Burns; Neil E Wilson; Jon K Furuyama; M Albert Thomas
Journal:  NMR Biomed       Date:  2014-02       Impact factor: 4.044

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  7 in total

Review 1.  Sparse Reconstruction Techniques in Magnetic Resonance Imaging: Methods, Applications, and Challenges to Clinical Adoption.

Authors:  Alice C Yang; Madison Kretzler; Sonja Sudarski; Vikas Gulani; Nicole Seiberlich
Journal:  Invest Radiol       Date:  2016-06       Impact factor: 6.016

2.  Prior-knowledge Fitting of Accelerated Five-dimensional Echo Planar J-resolved Spectroscopic Imaging: Effect of Nonlinear Reconstruction on Quantitation.

Authors:  Zohaib Iqbal; Neil E Wilson; M Albert Thomas
Journal:  Sci Rep       Date:  2017-07-24       Impact factor: 4.379

Review 3.  Quantifying fat replacement of muscle by quantitative MRI in muscular dystrophy.

Authors:  Jedrzej Burakiewicz; Christopher D J Sinclair; Dirk Fischer; Glenn A Walter; Hermien E Kan; Kieren G Hollingsworth
Journal:  J Neurol       Date:  2017-07-01       Impact factor: 4.849

4.  Deep learning can accelerate and quantify simulated localized correlated spectroscopy.

Authors:  Zohaib Iqbal; Dan Nguyen; Michael Albert Thomas; Steve Jiang
Journal:  Sci Rep       Date:  2021-04-22       Impact factor: 4.379

Review 5.  Accelerated MR spectroscopic imaging-a review of current and emerging techniques.

Authors:  Wolfgang Bogner; Ricardo Otazo; Anke Henning
Journal:  NMR Biomed       Date:  2020-05-12       Impact factor: 4.044

6.  Pilot Assessment of Brain Metabolism in Perinatally HIV-Infected Youths Using Accelerated 5D Echo Planar J-Resolved Spectroscopic Imaging.

Authors:  Zohaib Iqbal; Neil E Wilson; Margaret A Keller; David E Michalik; Joseph A Church; Karin Nielsen-Saines; Jaime Deville; Raissa Souza; Mary-Lynn Brecht; M Albert Thomas
Journal:  PLoS One       Date:  2016-09-13       Impact factor: 3.240

7.  Phased-array combination of 2D MRS for lipid composition quantification in patients with breast cancer.

Authors:  Vasiliki Mallikourti; Sai Man Cheung; Tanja Gagliardi; Nicholas Senn; Yazan Masannat; Trevor McGoldrick; Ravi Sharma; Steven D Heys; Jiabao He
Journal:  Sci Rep       Date:  2020-11-18       Impact factor: 4.379

  7 in total

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