Literature DB >> 26363302

DNA methylation changes in epithelial ovarian cancer histotypes.

Madalene A Earp1, Julie M Cunningham2.   

Abstract

Survival after a diagnosis of ovarian cancer has not improved, and despite histological differences, treatment is similar for all cases. Understanding the molecular basis for ovarian cancer risk and prognosis is fundamental, and to this end much has been gleaned about genetic changes contributing to risk, and to a lesser extent, survival. There's considerable evidence for genetic differences between the four pathologically defined histological subtypes; however, the contribution of epigenetics is less well documented. In this report, we review alterations in DNA methylation in ovarian cancer, focusing on histological subtypes, and studies examining the roles of methylation in determining therapy response. As epigenetics is making its way into clinical care, we review the application of cell free DNA methylation to ovarian cancer diagnosis and care. Finally, we comment on recurrent limitations in the DNA methylation literature for ovarian cancer, which can and should be addressed to mature this field.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Histotypes; Methylation; Ovarian cancer

Mesh:

Year:  2015        PMID: 26363302      PMCID: PMC5006940          DOI: 10.1016/j.ygeno.2015.09.001

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  158 in total

1.  A study of the methylation status of opioid binding protein/cell adhesion molecule-like gene in ovarian cancer using nested methylation-specific polymerase chain reaction detection.

Authors:  Feng Zhou; Xingjian Cao; Manhua Liu; Ying Wang; Guohua Tao
Journal:  Clin Lab       Date:  2011       Impact factor: 1.138

2.  A multiplex methylation-specific PCR assay for the detection of early-stage ovarian cancer using cell-free serum DNA.

Authors:  Qing Zhang; Guohong Hu; Qifeng Yang; Ruifen Dong; Xing Xie; Ding Ma; Keng Shen; Beihua Kong
Journal:  Gynecol Oncol       Date:  2013-04-25       Impact factor: 5.482

3.  BRCA mutation frequency and patterns of treatment response in BRCA mutation-positive women with ovarian cancer: a report from the Australian Ovarian Cancer Study Group.

Authors:  Kathryn Alsop; Sian Fereday; Cliff Meldrum; Anna deFazio; Catherine Emmanuel; Joshy George; Alexander Dobrovic; Michael J Birrer; Penelope M Webb; Colin Stewart; Michael Friedlander; Stephen Fox; David Bowtell; Gillian Mitchell
Journal:  J Clin Oncol       Date:  2012-06-18       Impact factor: 44.544

4.  DNA hypomethylation and ovarian cancer biology.

Authors:  Martin Widschwendter; Guanchao Jiang; Christian Woods; Hannes M Müller; Heidi Fiegl; Georg Goebel; Christian Marth; Elisabeth Müller-Holzner; Alain G Zeimet; Peter W Laird; Melanie Ehrlich
Journal:  Cancer Res       Date:  2004-07-01       Impact factor: 12.701

5.  LINE1 and Alu repetitive element DNA methylation in tumors and white blood cells from epithelial ovarian cancer patients.

Authors:  Stacey N Akers; Kirsten Moysich; Wa Zhang; Golda Collamat Lai; Austin Miller; Shashikant Lele; Kunle Odunsi; Adam R Karpf
Journal:  Gynecol Oncol       Date:  2013-12-25       Impact factor: 5.482

6.  Secondary mutations in BRCA2 associated with clinical resistance to a PARP inhibitor.

Authors:  Louise J Barber; Shahneen Sandhu; Lina Chen; James Campbell; Iwanka Kozarewa; Kerry Fenwick; Ioannis Assiotis; Daniel Nava Rodrigues; Jorge S Reis Filho; Victor Moreno; Joaquin Mateo; L Rhoda Molife; Johann De Bono; Stan Kaye; Christopher J Lord; Alan Ashworth
Journal:  J Pathol       Date:  2013-02       Impact factor: 7.996

7.  TGFBI promoter hypermethylation correlating with paclitaxel chemoresistance in ovarian cancer.

Authors:  Ning Wang; Hui Zhang; Qin Yao; Yankui Wang; Shuzhen Dai; Xingsheng Yang
Journal:  J Exp Clin Cancer Res       Date:  2012-01-16

8.  SULF2 methylation is associated with in vitro cisplatin sensitivity and clinical efficacy for gastric cancer patients treated with a modified FOLFOX regimen.

Authors:  Jie Shen; Jia Wei; Hao Wang; Yang Yang; Guofeng Yue; Lin Wang; Lixia Yu; Li Xie; Xia Sun; Xinyu Bian; Zhengyun Zou; Xiaoping Qian; Wenxian Guan; Baorui Liu
Journal:  PLoS One       Date:  2013-10-04       Impact factor: 3.240

9.  Progesterone receptor variation and risk of ovarian cancer is limited to the invasive endometrioid subtype: results from the Ovarian Cancer Association Consortium pooled analysis.

Authors:  C L Pearce; A H Wu; S A Gayther; A E Bale; P A Beck; J Beesley; S Chanock; D W Cramer; R DiCioccio; R Edwards; Z S Fredericksen; M Garcia-Closas; E L Goode; A C Green; L C Hartmann; E Hogdall; S K Kjaer; J Lissowska; V McGuire; F Modugno; K Moysich; R B Ness; S J Ramus; H A Risch; T A Sellers; H Song; D O Stram; K L Terry; P M Webb; D C Whiteman; A S Whittemore; W Zheng; P D P Pharoah; G Chenevix-Trench; M C Pike; J Schildkraut; A Berchuck
Journal:  Br J Cancer       Date:  2008-01-22       Impact factor: 7.640

10.  DNA methylation changes in ovarian cancer are cumulative with disease progression and identify tumor stage.

Authors:  George S Watts; Bernard W Futscher; Nicholas Holtan; Koen Degeest; Frederick E Domann; Stephen L Rose
Journal:  BMC Med Genomics       Date:  2008-09-30       Impact factor: 3.063

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  20 in total

Review 1.  Epigenetics in ovarian cancer.

Authors:  Yanina Natanzon; Ellen L Goode; Julie M Cunningham
Journal:  Semin Cancer Biol       Date:  2017-08-03       Impact factor: 15.707

Review 2.  Epigenetic Attire in Ovarian Cancer: The Emperor's New Clothes.

Authors:  Daniela Matei; Kenneth P Nephew
Journal:  Cancer Res       Date:  2020-05-07       Impact factor: 12.701

3.  Molecular Classification of Epithelial Ovarian Cancer Based on Methylation Profiling: Evidence for Survival Heterogeneity.

Authors:  Clara Bodelon; J Keith Killian; Joshua N Sampson; William F Anderson; Rayna Matsuno; Louise A Brinton; Jolanta Lissowska; Michael S Anglesio; David D L Bowtell; Jennifer A Doherty; Susan J Ramus; Aline Talhouk; Mark E Sherman; Nicolas Wentzensen
Journal:  Clin Cancer Res       Date:  2019-05-29       Impact factor: 12.531

Review 4.  Epithelial Ovarian Cancer and the Immune System: Biology, Interactions, Challenges and Potential Advances for Immunotherapy.

Authors:  Anne M Macpherson; Simon C Barry; Carmela Ricciardelli; Martin K Oehler
Journal:  J Clin Med       Date:  2020-09-14       Impact factor: 4.241

5.  Genetic Data from Nearly 63,000 Women of European Descent Predicts DNA Methylation Biomarkers and Epithelial Ovarian Cancer Risk.

Authors:  Yaohua Yang; Lang Wu; Xiang Shu; Yingchang Lu; Xiao-Ou Shu; Qiuyin Cai; Alicia Beeghly-Fadiel; Bingshan Li; Fei Ye; Andrew Berchuck; Hoda Anton-Culver; Susana Banerjee; Javier Benitez; Line Bjørge; James D Brenton; Ralf Butzow; Ian G Campbell; Jenny Chang-Claude; Kexin Chen; Linda S Cook; Daniel W Cramer; Anna deFazio; Joe Dennis; Jennifer A Doherty; Thilo Dörk; Diana M Eccles; Digna Velez Edwards; Peter A Fasching; Renée T Fortner; Simon A Gayther; Graham G Giles; Rosalind M Glasspool; Ellen L Goode; Marc T Goodman; Jacek Gronwald; Holly R Harris; Florian Heitz; Michelle A Hildebrandt; Estrid Høgdall; Claus K Høgdall; David G Huntsman; Siddhartha P Kar; Beth Y Karlan; Linda E Kelemen; Lambertus A Kiemeney; Susanne K Kjaer; Anita Koushik; Diether Lambrechts; Nhu D Le; Douglas A Levine; Leon F Massuger; Keitaro Matsuo; Taymaa May; Iain A McNeish; Usha Menon; Francesmary Modugno; Alvaro N Monteiro; Patricia G Moorman; Kirsten B Moysich; Roberta B Ness; Heli Nevanlinna; Håkan Olsson; N Charlotte Onland-Moret; Sue K Park; James Paul; Celeste L Pearce; Tanja Pejovic; Catherine M Phelan; Malcolm C Pike; Susan J Ramus; Elio Riboli; Cristina Rodriguez-Antona; Isabelle Romieu; Dale P Sandler; Joellen M Schildkraut; Veronica W Setiawan; Kang Shan; Nadeem Siddiqui; Weiva Sieh; Meir J Stampfer; Rebecca Sutphen; Anthony J Swerdlow; Lukasz M Szafron; Soo Hwang Teo; Shelley S Tworoger; Jonathan P Tyrer; Penelope M Webb; Nicolas Wentzensen; Emily White; Walter C Willett; Alicja Wolk; Yin Ling Woo; Anna H Wu; Li Yan; Drakoulis Yannoukakos; Georgia Chenevix-Trench; Thomas A Sellers; Paul D P Pharoah; Wei Zheng; Jirong Long
Journal:  Cancer Res       Date:  2018-12-17       Impact factor: 13.312

6.  Ovarian Clear Cell Carcinoma Sub-Typing by ARID1A Expression.

Authors:  Jae Yoon Choi; Hyun Ho Han; Young Tae Kim; Joo Hyun Lee; Baek Gil Kim; Suki Kang; Nam Hoon Cho
Journal:  Yonsei Med J       Date:  2017-01       Impact factor: 2.759

7.  RASSF1A promoter methylation in high-grade serous ovarian cancer: A direct comparison study in primary tumors, adjacent morphologically tumor cell-free tissues and paired circulating tumor DNA.

Authors:  Lydia Giannopoulou; Issam Chebouti; Kitty Pavlakis; Sabine Kasimir-Bauer; Evi S Lianidou
Journal:  Oncotarget       Date:  2017-03-28

8.  Next-Generation Sequencing Approach in Methylation Analysis of HNF1B and GATA4 Genes: Searching for Biomarkers in Ovarian Cancer.

Authors:  Ivana Bubancova; Helena Kovarikova; Jan Laco; Ema Ruszova; Ondrej Dvorak; Vladimir Palicka; Marcela Chmelarova
Journal:  Int J Mol Sci       Date:  2017-02-22       Impact factor: 5.923

9.  Klotho promoter methylation status and its prognostic value in ovarian cancer.

Authors:  Maryam H Al-Zahrani; Fatimah M Yahya; Mourad Assidi; Ashraf Dallol; Abdelbaset Buhmeida
Journal:  Mol Clin Oncol       Date:  2021-07-03

Review 10.  Precision Medicine for Molecularly Targeted Agents and Immunotherapies in Early-Phase Clinical Trials.

Authors:  Juanita Lopez; Sam Harris; Desam Roda; Timothy A Yap
Journal:  Transl Oncogenomics       Date:  2015-11-15
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