Literature DB >> 26363125

The evolution of animal genomes.

Casey W Dunn1, Joseph F Ryan2.   

Abstract

Genome sequences are now available for hundreds of species sampled across the animal phylogeny, bringing key features of animal genome evolution into sharper focus. The field of animal evolutionary genomics has focused on identifying and classifying the diversity genomic features, reconstructing the history of evolutionary changes in animal genomes, and testing hypotheses about the evolutionary relationships of animals. The grand challenges moving forward are to connect evolutionary changes in genomes with particular evolutionary changes in phenotypes, and to determine which changes are driven by selection. This will require far greater genome sampling both across and within species, extensive phenotype data, a well resolved animal phylogeny, and advances in comparative methods.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2015        PMID: 26363125     DOI: 10.1016/j.gde.2015.08.006

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  10 in total

1.  Advancing Genomics through the Global Invertebrate Genomics Alliance (GIGA).

Authors:  Christian R Voolstra; Gert Wörheide; Jose V Lopez
Journal:  Invertebr Syst       Date:  2017-03-16       Impact factor: 2.583

Review 2.  The state of Medusozoa genomics: current evidence and future challenges.

Authors:  Mylena D Santander; Maximiliano M Maronna; Joseph F Ryan; Sónia C S Andrade
Journal:  Gigascience       Date:  2022-05-17       Impact factor: 7.658

3.  A stony coral cell atlas illuminates the molecular and cellular basis of coral symbiosis, calcification, and immunity.

Authors:  Shani Levy; Anamaria Elek; Xavier Grau-Bové; Simón Menéndez-Bravo; Marta Iglesias; Amos Tanay; Tali Mass; Arnau Sebé-Pedrós
Journal:  Cell       Date:  2021-05-03       Impact factor: 41.582

4.  Controlling for Phylogenetic Relatedness and Evolutionary Rates Improves the Discovery of Associations Between Species' Phenotypic and Genomic Differences.

Authors:  Xavier Prudent; Genis Parra; Peter Schwede; Juliana G Roscito; Michael Hiller
Journal:  Mol Biol Evol       Date:  2016-05-24       Impact factor: 16.240

5.  Animal Mitochondrial DNA as We Do Not Know It: mt-Genome Organization and Evolution in Nonbilaterian Lineages.

Authors:  Dennis V Lavrov; Walker Pett
Journal:  Genome Biol Evol       Date:  2016-09-26       Impact factor: 3.416

6.  An annotated draft genome for Radix auricularia (Gastropoda, Mollusca).

Authors:  Tilman Schell; Barbara Feldmeyer; Hanno Schmidt; Bastian Greshake; Oliver Tills; Manuela Truebano; Simon D Rundle; Juraj Paule; Ingo Ebersberger; Markus Pfenninger
Journal:  Genome Biol Evol       Date:  2017-02-15       Impact factor: 3.416

7.  The Genome and mRNA Transcriptome of the Cosmopolitan Calanoid Copepod Acartia tonsa Dana Improve the Understanding of Copepod Genome Size Evolution.

Authors:  Tue Sparholt Jørgensen; Bent Petersen; H Cecilie B Petersen; Patrick Denis Browne; Stefan Prost; Jonathon H Stillman; Lars Hestbjerg Hansen; Benni Winding Hansen
Journal:  Genome Biol Evol       Date:  2019-05-01       Impact factor: 3.416

8.  Dissecting the chromosome-level genome of the Asian Clam (Corbicula fluminea).

Authors:  Tongqing Zhang; Jiawen Yin; Shengkai Tang; Daming Li; Xiankun Gu; Shengyu Zhang; Weiguo Suo; Xiaowei Liu; Yanshan Liu; Qicheng Jiang; Muzi Zhao; Yue Yin; Jianlin Pan
Journal:  Sci Rep       Date:  2021-07-22       Impact factor: 4.379

9.  Predicting RAD-seq Marker Numbers across the Eukaryotic Tree of Life.

Authors:  Santiago Herrera; Paula H Reyes-Herrera; Timothy M Shank
Journal:  Genome Biol Evol       Date:  2015-11-03       Impact factor: 3.416

10.  Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines.

Authors:  Mikhail Rayko; Aleksey Komissarov; Jason C Kwan; Grace Lim-Fong; Adelaide C Rhodes; Sergey Kliver; Polina Kuchur; Stephen J O'Brien; Jose V Lopez
Journal:  Sci Data       Date:  2020-10-20       Impact factor: 6.444

  10 in total

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