| Literature DB >> 26355664 |
Andrew J Pakstis1, Eva Haigh2, Lotfi Cherni3, Amel Ben Ammar ElGaaied4, Alison Barton2, Baigalmaa Evsanaa5, Ariunaa Togtokh6, Jane Brissenden7, Janet Roscoe8, Ozlem Bulbul9, Gonul Filoglu10, Cemal Gurkan11, Kelly A Meiklejohn12, James M Robertson13, Cai-Xia Li14, Yi-Liang Wei15, Hui Li16, Usha Soundararajan2, Haseena Rajeevan2, Judith R Kidd2, Kenneth K Kidd2.
Abstract
Ancestry inference for a person using a panel of SNPs depends on the variation of frequencies of those SNPs around the world and the amount of reference data available for calculation/comparison. The Kidd Lab panel of 55 AISNPs has been incorporated in commercial kits by both Life Technologies and Illumina for massively parallel sequencing. Therefore, a larger set of reference populations will be useful for researchers using those kits. We have added reference population allele frequencies for 52 population samples to the 73 previously entered so that there are now allele frequencies publicly available in ALFRED and FROG-kb for a total of 125 population samples.Entities:
Keywords: ALFRED; Ancestry; FROG-kb; Reference database; SNP
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Year: 2015 PMID： 26355664 DOI： 10.1016/j.fsigen.2015.08.003
Source DB: PubMed Journal: Forensic Sci Int Genet ISSN： 1872-4973 Impact factor: 4.882