Literature DB >> 26355093

Sulfolobus Spindle-Shaped Virus 1 Contains Glycosylated Capsid Proteins, a Cellular Chromatin Protein, and Host-Derived Lipids.

Emmanuelle R J Quemin1, Maija K Pietilä2, Hanna M Oksanen2, Patrick Forterre1, W Irene C Rijpstra3, Stefan Schouten3, Dennis H Bamford2, David Prangishvili1, Mart Krupovic4.   

Abstract

UNLABELLED: Geothermal and hypersaline environments are rich in virus-like particles, among which spindle-shaped morphotypes dominate. Currently, viruses with spindle- or lemon-shaped virions are exclusive to Archaea and belong to two distinct viral families. The larger of the two families, the Fuselloviridae, comprises tail-less, spindle-shaped viruses, which infect hosts from phylogenetically distant archaeal lineages. Sulfolobus spindle-shaped virus 1 (SSV1) is the best known member of the family and was one of the first hyperthermophilic archaeal viruses to be isolated. SSV1 is an attractive model for understanding virus-host interactions in Archaea; however, the constituents and architecture of SSV1 particles remain only partially characterized. Here, we have conducted an extensive biochemical characterization of highly purified SSV1 virions and identified four virus-encoded structural proteins, VP1 to VP4, as well as one DNA-binding protein of cellular origin. The virion proteins VP1, VP3, and VP4 undergo posttranslational modification by glycosylation, seemingly at multiple sites. VP1 is also proteolytically processed. In addition to the viral DNA-binding protein VP2, we show that viral particles contain the Sulfolobus solfataricus chromatin protein Sso7d. Finally, we provide evidence indicating that SSV1 virions contain glycerol dibiphytanyl glycerol tetraether (GDGT) lipids, resolving a long-standing debate on the presence of lipids within SSV1 virions. A comparison of the contents of lipids isolated from the virus and its host cell suggests that GDGTs are acquired by the virus in a selective manner from the host cytoplasmic membrane, likely during progeny egress. IMPORTANCE: Although spindle-shaped viruses represent one of the most prominent viral groups in Archaea, structural data on their virion constituents and architecture still are scarce. The comprehensive biochemical characterization of the hyperthermophilic virus SSV1 presented here brings novel and significant insights into the organization and architecture of spindle-shaped virions. The obtained data permit the comparison between spindle-shaped viruses residing in widely different ecological niches, improving our understanding of the adaptation of viruses with unusual morphotypes to extreme environmental conditions.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID: 26355093      PMCID: PMC4645638          DOI: 10.1128/JVI.02270-15

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  77 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  The SSV1 viral integrase is not essential.

Authors:  Adam J Clore; Kenneth M Stedman
Journal:  Virology       Date:  2006-12-18       Impact factor: 3.616

Review 3.  Virus-host interactions in salt lakes.

Authors:  Kate Porter; Brendan E Russ; Michael L Dyall-Smith
Journal:  Curr Opin Microbiol       Date:  2007-08-21       Impact factor: 7.934

4.  Virology. A virus that infects a hyperthermophile encapsidates A-form DNA.

Authors:  Frank DiMaio; Xiong Yu; Elena Rensen; Mart Krupovic; David Prangishvili; Edward H Egelman
Journal:  Science       Date:  2015-05-22       Impact factor: 47.728

5.  Archaeal viruses: living fossils of the ancient virosphere?

Authors:  David Prangishvili
Journal:  Ann N Y Acad Sci       Date:  2015-02-25       Impact factor: 5.691

6.  Sulfolobus tengchongensis spindle-shaped virus STSV1: virus-host interactions and genomic features.

Authors:  Xiaoyu Xiang; Lanming Chen; Xiaoxing Huang; Yuanmin Luo; Qunxin She; Li Huang
Journal:  J Virol       Date:  2005-07       Impact factor: 5.103

7.  Diversity in prokaryotic glycosylation: an archaeal-derived N-linked glycan contains legionaminic acid.

Authors:  Lina Kandiba; Olli Aitio; Jari Helin; Ziqiang Guan; Perttu Permi; Dennis H Bamford; Jerry Eichler; Elina Roine
Journal:  Mol Microbiol       Date:  2012-04-11       Impact factor: 3.501

8.  Structure of A197 from Sulfolobus turreted icosahedral virus: a crenarchaeal viral glycosyltransferase exhibiting the GT-A fold.

Authors:  Eric T Larson; Dirk Reiter; Mark Young; C Martin Lawrence
Journal:  J Virol       Date:  2006-08       Impact factor: 5.103

Review 9.  Archaeal viruses and bacteriophages: comparisons and contrasts.

Authors:  Maija K Pietilä; Tatiana A Demina; Nina S Atanasova; Hanna M Oksanen; Dennis H Bamford
Journal:  Trends Microbiol       Date:  2014-03-16       Impact factor: 17.079

10.  A genetic study of SSV1, the prototypical fusellovirus.

Authors:  Eric Iverson; Kenneth Stedman
Journal:  Front Microbiol       Date:  2012-06-05       Impact factor: 5.640

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  24 in total

1.  New virus isolates from Italian hydrothermal environments underscore the biogeographic pattern in archaeal virus communities.

Authors:  Diana P Baquero; Patrizia Contursi; Monica Piochi; Simonetta Bartolucci; Ying Liu; Virginija Cvirkaite-Krupovic; David Prangishvili; Mart Krupovic
Journal:  ISME J       Date:  2020-04-22       Impact factor: 10.302

2.  Spindle-shaped viruses infect marine ammonia-oxidizing thaumarchaea.

Authors:  Jong-Geol Kim; So-Jeong Kim; Virginija Cvirkaite-Krupovic; Woon-Jong Yu; Joo-Han Gwak; Mario López-Pérez; Francisco Rodriguez-Valera; Mart Krupovic; Jang-Cheon Cho; Sung-Keun Rhee
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-16       Impact factor: 11.205

3.  A Novel Type of Polyhedral Viruses Infecting Hyperthermophilic Archaea.

Authors:  Ying Liu; Sonoko Ishino; Yoshizumi Ishino; Gérard Pehau-Arnaudet; Mart Krupovic; David Prangishvili
Journal:  J Virol       Date:  2017-06-09       Impact factor: 5.103

4.  Interaction of extremophilic archaeal viruses with human and mouse complement system and viral biodistribution in mice.

Authors:  Linping Wu; Kristine Buch Uldahl; Fangfang Chen; Halli Benasutti; Deborah Logvinski; Vivian Vu; Nirmal K Banda; Xu Peng; Dmitri Simberg; Seyed Moein Moghimi
Journal:  Mol Immunol       Date:  2017-08-30       Impact factor: 4.407

Review 5.  The enigmatic archaeal virosphere.

Authors:  David Prangishvili; Dennis H Bamford; Patrick Forterre; Jaime Iranzo; Eugene V Koonin; Mart Krupovic
Journal:  Nat Rev Microbiol       Date:  2017-11-10       Impact factor: 60.633

6.  A packing for A-form DNA in an icosahedral virus.

Authors:  Fengbin Wang; Ying Liu; Zhangli Su; Tomasz Osinski; Guilherme A P de Oliveira; James F Conway; Stefan Schouten; Mart Krupovic; David Prangishvili; Edward H Egelman
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-21       Impact factor: 11.205

7.  Novel Sulfolobus Fuselloviruses with Extensive Genomic Variations.

Authors:  Junxia Zhang; Xiaowei Zheng; Haina Wang; Hongchen Jiang; Hailiang Dong; Li Huang
Journal:  J Virol       Date:  2020-01-31       Impact factor: 5.103

8.  Novel Sulfolobus Virus with an Exceptional Capsid Architecture.

Authors:  Haina Wang; Zhenqian Guo; Hongli Feng; Yufei Chen; Xiuqiang Chen; Zhimeng Li; Walter Hernández-Ascencio; Xin Dai; Zhenfeng Zhang; Xiaowei Zheng; Marielos Mora-López; Yu Fu; Chuanlun Zhang; Ping Zhu; Li Huang
Journal:  J Virol       Date:  2018-02-12       Impact factor: 5.103

Review 9.  Galactomannan degradation by thermophilic enzymes: a hot topic for biotechnological applications.

Authors:  Martina Aulitto; Salvatore Fusco; Danila Limauro; Gabriella Fiorentino; Simonetta Bartolucci; Patrizia Contursi
Journal:  World J Microbiol Biotechnol       Date:  2019-01-30       Impact factor: 3.312

10.  Structures of filamentous viruses infecting hyperthermophilic archaea explain DNA stabilization in extreme environments.

Authors:  Fengbin Wang; Diana P Baquero; Leticia C Beltran; Zhangli Su; Tomasz Osinski; Weili Zheng; David Prangishvili; Mart Krupovic; Edward H Egelman
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-05       Impact factor: 11.205

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