Literature DB >> 26342311

Targeted serum metabolite profiling and sequential metabolite ratio analysis for colorectal cancer progression monitoring.

Jiangjiang Zhu1, Danijel Djukovic1, Lingli Deng1,2, Haiwei Gu1, Farhan Himmati1, Mohammad Abu Zaid3, Elena Gabriela Chiorean3,4, Daniel Raftery5,6.   

Abstract

Colorectal cancer (CRC) is one of the most prevalent cancers worldwide and a major cause of human morbidity and mortality. In addition to early detection, close monitoring of disease progression in CRC can be critical for patient prognosis and treatment decisions. Efforts have been made to develop new methods for improved early detection and patient monitoring; however, research focused on CRC surveillance for treatment response and disease recurrence using metabolomics has yet to be reported. In this proof of concept study, we applied a targeted liquid chromatography tandem mass spectrometry (LC-MS/MS) metabolic profiling approach focused on sequential metabolite ratio analysis of serial serum samples to monitor disease progression from 20 CRC patients. The use of serial samples reduces patient to patient metabolic variability. A partial least squares-discriminant analysis (PLS-DA) model using a panel of five metabolites (succinate, N2, N2-dimethylguanosine, adenine, citraconic acid, and 1-methylguanosine) was established, and excellent model performance (sensitivity = 0.83, specificity = 0.94, area under the receiver operator characteristic curve (AUROC) = 0.91 was obtained, which is superior to the traditional CRC monitoring marker carcinoembryonic antigen (sensitivity = 0.75, specificity = 0.76, AUROC = 0.80). Monte Carlo cross validation was applied, and the robustness of our model was clearly observed by the separation of true classification models from the random permutation models. Our results suggest the potential utility of metabolic profiling for CRC disease monitoring.

Entities:  

Keywords:  Colorectal cancer; Disease progression monitoring; Metabolomics; Sequential metabolite ratio analysis; Serial patient samples; Serum metabolites; Targeted metabolic profiling

Mesh:

Year:  2015        PMID: 26342311     DOI: 10.1007/s00216-015-8984-8

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  22 in total

1.  Combining NMR and LC/MS Using Backward Variable Elimination: Metabolomics Analysis of Colorectal Cancer, Polyps, and Healthy Controls.

Authors:  Lingli Deng; Haiwei Gu; Jiangjiang Zhu; G A Nagana Gowda; Danijel Djukovic; E Gabriela Chiorean; Daniel Raftery
Journal:  Anal Chem       Date:  2016-08-01       Impact factor: 6.986

2.  Polybrominated Diphenyl Ethers and Gut Microbiome Modulate Metabolic Syndrome-Related Aqueous Metabolites in Mice.

Authors:  David K Scoville; Cindy Yanfei Li; Dongfang Wang; Joseph L Dempsey; Daniel Raftery; Sridhar Mani; Haiwei Gu; Julia Yue Cui
Journal:  Drug Metab Dispos       Date:  2019-05-23       Impact factor: 3.922

3.  Targeted High Performance Liquid Chromatography Tandem Mass Spectrometry-based Metabolomics differentiates metabolic syndrome from obesity.

Authors:  Fanyi Zhong; Mengyang Xu; Richard S Bruno; Kevin D Ballard; Jiangjiang Zhu
Journal:  Exp Biol Med (Maywood)       Date:  2017-01-01

4.  Metabolic signature of the aging eye in mice.

Authors:  Yekai Wang; Allison Grenell; Fanyi Zhong; Michelle Yam; Allison Hauer; Elizabeth Gregor; Siyan Zhu; Daniel Lohner; Jiangjiang Zhu; Jianhai Du
Journal:  Neurobiol Aging       Date:  2018-08-07       Impact factor: 4.673

5.  Metabolic Markers and Statistical Prediction of Serous Ovarian Cancer Aggressiveness by Ambient Ionization Mass Spectrometry Imaging.

Authors:  Marta Sans; Kshipra Gharpure; Robert Tibshirani; Jialing Zhang; Li Liang; Jinsong Liu; Jonathan H Young; Robert L Dood; Anil K Sood; Livia S Eberlin
Journal:  Cancer Res       Date:  2017-04-17       Impact factor: 12.701

6.  Global and targeted serum metabolic profiling of colorectal cancer progression.

Authors:  Yin Long; Beatriz Sanchez-Espiridion; Moubin Lin; Lindsey White; Lopa Mishra; Gottumakkala S Raju; Scott Kopetz; Cathy Eng; Michelle A T Hildebrandt; David W Chang; Yuanqing Ye; Dong Liang; Xifeng Wu
Journal:  Cancer       Date:  2017-06-22       Impact factor: 6.860

7.  Metabolites Associated With Fatigue and Physical Activity in Childhood Cancer.

Authors:  Janice S Withycombe; Ronald Eldridge; Yan Jin; Haiwai Gu; Sharon M Castellino; Dorothy D Sears
Journal:  Biol Res Nurs       Date:  2022-04-25       Impact factor: 2.318

8.  Establishment, Validation, and Initial Application of a Sensitive LC-MS/MS Assay for Quantification of the Naturally Occurring Isomers Itaconate, Mesaconate, and Citraconate.

Authors:  Moritz Winterhoff; Fangfang Chen; Nishika Sahini; Thomas Ebensen; Maike Kuhn; Volkhard Kaever; Heike Bähre; Frank Pessler
Journal:  Metabolites       Date:  2021-04-26

9.  Metabolomics Analysis of Viral Therapeutics.

Authors:  Haiwei Gu; Xiaojian Shi; Paniz Jasbi; Jeffrey Patterson
Journal:  Methods Mol Biol       Date:  2021

10.  Monitoring cancer prognosis, diagnosis and treatment efficacy using metabolomics and lipidomics.

Authors:  Emily G Armitage; Andrew D Southam
Journal:  Metabolomics       Date:  2016-08-16       Impact factor: 4.290

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