| Literature DB >> 26339632 |
Shengyue Ji1, Weili Li1, Haiyun Xin1, Shan Wang1, Binyun Cao1.
Abstract
Sublancin 168, as a distinct S-linked antimicrobial glycopeptide produced by Bacillus subtilis 168, is effective in killing specific microorganisms. However, the reported yield of sublancin 168 is at a low level of no more than 60 mg from 1 L fermentation culture of B. subtilis 168 by using the method in the literature. Thus optimization of fermentation condition for efficiently producing sublancin 168 is required. Here, Box-Behnken design was used to determine the optimal combination of three fermentation parameters, namely, corn powder, soybean meal, and temperature that were identified previously by Plackett-Burman design and the steepest ascent experiment. Subsequently, based on the response surface methodology, the quadratic regression model for optimally producing sublancin 168 was developed, and the optimal combination of culture parameters for maximum sublancin 168 production of 129.72 mg/L was determined as corn powder 28.49 g/L, soybean meal 22.99 g/L, and incubation temperature 30.8°C. The results showed that sublancin 168 production obtained experimentally was coincident with predicted value of 125.88 mg/L, and the developed model was proved to be adequate, and the aim of efficiently producing sublancin 168 was achieved.Entities:
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Year: 2015 PMID: 26339632 PMCID: PMC4538419 DOI: 10.1155/2015/687915
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Effects of different carbon sources and nitrogen sources on the yield of sublancin 168.
| Carbon sources | Nitrogen sources | ||
|---|---|---|---|
| Sources | Yield (mg/L) | Sources | Yield (mg/L) |
| Corn powder | 67.66 ± 3.56 | Yeast extract | 28.89 ± 4.72 |
| Glycerol | 28.96 ± 4.39 | Peptone | 50.11 ± 4.56 |
| Sucrose | 30.55 ± 4.90 | Soybean meal | 58.40 ± 5.33 |
| Lactose | 29.61 ± 5.03 | Urea | 8.72 ± 3.18 |
| Starch | 50.65 ± 4.85 | (NH4)2SO4 | 32.93 ± 2.10 |
| Maltose | 28.26 ± 5.10 | ||
| Glucose | 21.40 ± 5.49 | ||
Each experiment was repeated three times, and all of the data were expressed as means ± standard deviations.
Variables and test levels for Plackett-Burman experiment.
| Number | Variables | Code levels | Estimate |
|
| Significance | |
|---|---|---|---|---|---|---|---|
| −1 | 1 | ||||||
|
| Peptone (g/L) | 8 | 12 | 2.33 | 1.01 | 0.3851 | |
|
| Corn powder (g/L) | 20 | 30 | 27.20 | 11.83 | 0.0013 | ∗ |
|
| Starch (g/L) | 10 | 20 | 3.19 | 1.39 | 0.2594 | |
|
| Soybean meal (g/L) | 24 | 36 | 21.09 | 9.17 | 0.0027 | ∗ |
|
| KH2PO4 (g/L) | 3 | 6 | 3.21 | 1.39 | 0.2575 | |
|
| (NH4)2SO4 (g/L) | 3 | 6 | −0.96 | −0.42 | 0.7038 | |
|
| Incubation temperature (°C) | 28 | 34 | 11.11 | 4.83 | 0.0169 | ∗ |
|
| Initial pH | 6.5 | 8.5 | −1.91 | −0.83 | 0.0466 | |
|
| Incubation time (h) | 28 | 40 | 0.38 | 0.17 | 0.8786 | |
|
| Inoculum size (%) | 1 | 3 | −2.34 | −1.01 | 0.3834 | |
∗ indicates model terms are significant.
Experimental design and results of the Plackett-Burman design.
| Trials | Variable levels | Yield (mg/L) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
|
|
|
| Observed | Predicted | |
| 1 | 1 | −1 | 1 | 1 | −1 | −1 | −1 | −1 | 1 | −1 | 88.38 ± 3.84 | 90.91 |
| 2 | 1 | 1 | −1 | 1 | 1 | −1 | −1 | −1 | −1 | 1 | 117.96 ± 2.37 | 115.41 |
| 3 | −1 | 1 | 1 | −1 | 1 | 1 | −1 | −1 | −1 | −1 | 97.42 ± 6.78 | 96.55 |
| 4 | −1 | −1 | 1 | 1 | −1 | 1 | 1 | −1 | −1 | −1 | 101.79 ± 3.41 | 98.33 |
| 5 | 1 | −1 | −1 | 1 | 1 | −1 | 1 | 1 | −1 | −1 | 102.43 ± 3.74 | 99.73 |
| 6 | 1 | 1 | −1 | −1 | 1 | 1 | −1 | 1 | 1 | −1 | 92.45 ± 3.96 | 94.17 |
| 7 | 1 | 1 | 1 | −1 | −1 | 1 | 1 | −1 | 1 | 1 | 107.47 ± 9.89 | 104.83 |
| 8 | 1 | 1 | 1 | 1 | −1 | −1 | 1 | 1 | −1 | 1 | 121.38 ± 2.26 | 124.57 |
| 9 | −1 | 1 | 1 | 1 | 1 | −1 | −1 | 1 | 1 | −1 | 119.62 ± 2.27 | 117.05 |
| 10 | 1 | −1 | 1 | 1 | 1 | 1 | −1 | −1 | 1 | 1 | 88.76 ± 5.85 | 90.81 |
| 11 | −1 | 1 | −1 | 1 | 1 | 1 | 1 | −1 | −1 | 1 | 119.63 ± 5.56 | 123.21 |
| 12 | 1 | −1 | 1 | −1 | 1 | 1 | 1 | 1 | −1 | −1 | 79.81 ± 4.77 | 80.87 |
| 13 | −1 | 1 | −1 | 1 | −1 | 1 | 1 | 1 | 1 | −1 | 118.85 ± 5.84 | 120.81 |
| 14 | −1 | −1 | 1 | −1 | 1 | −1 | 1 | 1 | 1 | 1 | 76.33 ± 3.15 | 77.53 |
| 15 | −1 | −1 | −1 | 1 | −1 | 1 | −1 | 1 | 1 | 1 | 82.21 ± 2.79 | 80.17 |
| 16 | −1 | −1 | −1 | −1 | 1 | −1 | 1 | −1 | 1 | 1 | 77.19 ± 4.41 | 76.27 |
| 17 | 1 | −1 | −1 | −1 | −1 | 1 | −1 | 1 | −1 | 1 | 62.37 ± 5.76 | 61.05 |
| 18 | 1 | 1 | −1 | −1 | −1 | −1 | 1 | −1 | 1 | −1 | 106.22 ± 7.25 | 104.95 |
| 19 | −1 | 1 | 1 | −1 | −1 | −1 | −1 | 1 | −1 | 1 | 90.56 ± 2.95 | 90.05 |
| 20 | −1 | −1 | −1 | −1 | −1 | −1 | −1 | −1 | −1 | −1 | 60.31 ± 3.20 | 63.93 |
Each experiment was repeated three times, and all of the data were expressed as means ± standard deviations. X 1, X 2, X 3, X 4, X 5, X 6, X 7, X 8, X 9, and X 10 represent peptone (g/L), corn powder (g/L), starch (g/L), soybean meal (g/L), KH2PO4 (g/L), (NH4)2SO4 (g/L), incubation temperature (°C), initial pH, incubation time (h), and inoculum size (%).
Experimental design and results of Box-Behnken optimization experiment.
| Trials |
|
|
| Yield (mg/L) | |
|---|---|---|---|---|---|
| Observed | Predicted | ||||
| 1 | 22.00 | 24.00 | 36.00 | 73.66 ± 1.62 | 73.43 |
| 2 | 34.00 | 28.00 | 32.00 | 86.35 ± 2.78 | 86.78 |
| 3 | 28.00 | 28.00 | 28.00 | 77.37 ± 1.83 | 77.57 |
| 4 | 28.00 | 24.00 | 32.00 | 124.39 ± 1.92 | 124.15 |
| 5 | 22.00 | 28.00 | 32.00 | 71.97 ± 1.26 | 71.81 |
| 6 | 34.00 | 24.00 | 28.00 | 94.52 ± 3.73 | 94.75 |
| 7 | 28.00 | 28.00 | 36.00 | 92.97 ± 5.06 | 93.37 |
| 8 | 28.00 | 20.00 | 28.00 | 115.92 ± 2.90 | 115.53 |
| 9 | 22.00 | 20.00 | 32.00 | 86.35 ± 2.72 | 85.93 |
| 10 | 28.00 | 24.00 | 32.00 | 124.22 ± 1.24 | 124.15 |
| 11 | 28.00 | 24.00 | 32.00 | 123.85 ± 1.63 | 124.15 |
| 12 | 34.00 | 20.00 | 32.00 | 92.67 ± 3.56 | 93.37 |
| 13 | 34.00 | 24.00 | 36.00 | 90.80 ± 2.90 | 90.82 |
| 14 | 22.00 | 24.00 | 28.00 | 91.98 ± 3.72 | 91.95 |
| 15 | 28.00 | 20.00 | 36.00 | 77.48 ± 2.35 | 77.28 |
Each experiment was repeated three times, and all of the data were expressed as means ± standard deviations. X 1, X 2, and X 3 represent corn powder (g/L), soybean meal, and incubation temperature (°C), respectively.
Figure 1Pareto chart of standardized effects on sublancin 168 production. X 1, X 2, X 3, X 4, X 5, X 6, X 7, X 8, X 9, and X 10 are the coded values of peptone, corn powder, starch, soybean meal, KH2PO4, (NH4)2SO4, incubation temperature, initial pH, incubation time, and inoculum size, respectively. The chart has a vertical line (i.e., standardized effect = 1.886) at the critical t-value for α of 0.20. The bars are shown in order of the size of the effects, and the standardized effect of every term was displayed on the top of its corresponding bar.
Experimental design and corresponding response of steepest ascent.
| Experiment number | Corn powder (g/L) | Soybean meal (g/L) | Incubation temperature (°C) | Yield (mg/L) |
|---|---|---|---|---|
| 0 | 12 | 8 | 25 | 72.7 ± 2.97 |
| 0 + 1Δ | 16 | 12 | 27 | 80.3 ± 4.11 |
| 0 + 2Δ | 20 | 16 | 29 | 89.5 ± 2.42 |
| 0 + 3Δ | 24 | 20 | 31 | 117.5 ± 3.58 |
| 0 + 4Δ | 28 | 24 | 33 | 122.6 ± 1.64 |
| 0 + 5Δ | 32 | 28 | 35 | 109.0 ± 4.17 |
Each experiment was repeated three times, and all of the data were expressed as means ± standard deviations.
Analysis of variances of the quadratic polynomial model.
| Source | SS | DF | MS |
|
|
|---|---|---|---|---|---|
| Model | 4776.00 | 9 | 530.67 | 2507.25 | <0.0001 |
| Lack of fit | 0.90 | 3 | 0.30 | 3.92 | 0.2100 |
| Pure error | 0.15 | 2 | 0.08 | ||
|
| |||||
| Total | 4777.05 | 14 | |||
R 2 = 0.9998, R Adj 2 = 0.9993, and R Pre 2 = 0.9998. SS: sum of squares; DF: degrees of freedom; MS: mean square.
Results of regression analysis of the second-order polynomial model.
| Factor | Coefficient estimate | Standard error |
|
|
|---|---|---|---|---|
| Intercept | 124.15 | 0.27 | 2507.25 | <0.0001 |
|
| 5.05 | 0.16 | 963.01 | <0.0001 |
|
| −5.47 | 0.16 | 1130.53 | <0.0001 |
|
| −5.61 | 0.16 | 1189.84 | <0.0001 |
|
| 2.02 | 0.23 | 76.82 | 0.0003 |
|
| 3.65 | 0.23 | 251.72 | <0.0001 |
|
| 13.51 | 0.23 | 3449.98 | <0.0001 |
|
| −21.51 | 0.24 | 8068.33 | <0.0001 |
|
| −18.31 | 0.24 | 5847.41 | <0.0001 |
|
| −14.91 | 0.24 | 3877.87 | <0.0001 |
Figure 23D response surface curves (a) and 2D contour plots (b) predicting for sublancin 168 production by Bacillus subtilis 168 through optimization of variables. The interaction between (a1, b1) soybean meal and corn powder, (a2, b2) incubation temperature, and soybean meal and (a3, b3) incubation temperature and corn powder.