Literature DB >> 26337441

A geometric method for the detection and correction of segmentation leaks of anatomical structures in volumetric medical images.

Achia Kronman1, Leo Joskowicz2.   

Abstract

PURPOSE: Patient-specific models of anatomical structures and pathologies generated from volumetric medical images play an increasingly central role in many aspects of patient care. A key task in generating these models is the segmentation of anatomical structures and pathologies of interest. Although numerous segmentation methods are available, they often produce erroneous delineations that require time-consuming modifications.
METHODS: We present a new geometry-based algorithm for the reliable detection and correction of segmentation errors in volumetric medical images. The method is applicable to anatomical structures consisting of a few 3D star-shaped components. First, it detects segmentation errors by casting rays from the initial segmentation interior to its outer surface. It then classifies the segmentation surface into correct and erroneous regions by minimizing an energy functional that incorporates first- and second-order properties of the rays lengths. Finally, it corrects the segmentation errors by computing new locations for the erroneous surface points by Laplace deformation so that the new surface has maximum smoothness with respect to the rays-length gradient magnitude.
RESULTS: Our evaluation on initial segmentations of 16 abdominal aortic aneurysm and 12 lung tumors in CT scans obtained by both adaptive region-growing and active contours level-set segmentation improved the volumetric overlap error by 66 and 70.5% respectively, with respect to the ground-truth.
CONCLUSIONS: The advantages of our method are that it is independent of the initial segmentation algorithm that covers a variety of anatomical structures and pathologies, that it does not require a shape prior, and that it requires minimal user interaction.

Entities:  

Keywords:  Laplace deformation; Medical image segmentation; Segmentation errors correction; Volumetric images

Mesh:

Year:  2015        PMID: 26337441     DOI: 10.1007/s11548-015-1285-z

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  8 in total

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2.  Framework for the Statistical Shape Analysis of Brain Structures using SPHARM-PDM.

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4.  Random walks for image segmentation.

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Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-11       Impact factor: 6.226

5.  An energy minimization approach to the data driven editing of presegmented images/volumes.

Authors:  Leo Grady; Gareth Funka-Lea
Journal:  Med Image Comput Comput Assist Interv       Date:  2006

6.  Anatomical structures segmentation by spherical 3D ray casting and gradient domain editing.

Authors:  A Kronman; Leo Joskowicz; J Sosna
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

7.  Image segmentation errors correction by mesh segmentation and deformation.

Authors:  Achia Kronman; Leo Joskowicz
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

8.  A fully automated human knee 3D MRI bone segmentation using the ray casting technique.

Authors:  Pierre Dodin; Johanne Martel-Pelletier; Jean-Pierre Pelletier; François Abram
Journal:  Med Biol Eng Comput       Date:  2011-10-29       Impact factor: 2.602

  8 in total
  2 in total

1.  Automated Segmentation of Colorectal Tumor in 3D MRI Using 3D Multiscale Densely Connected Convolutional Neural Network.

Authors:  Mumtaz Hussain Soomro; Matteo Coppotelli; Silvia Conforto; Maurizio Schmid; Gaetano Giunta; Lorenzo Del Secco; Emanuele Neri; Damiano Caruso; Marco Rengo; Andrea Laghi
Journal:  J Healthc Eng       Date:  2019-01-31       Impact factor: 2.682

2.  Deep Learning Techniques for Medical Image Segmentation: Achievements and Challenges.

Authors:  Mohammad Hesam Hesamian; Wenjing Jia; Xiangjian He; Paul Kennedy
Journal:  J Digit Imaging       Date:  2019-08       Impact factor: 4.056

  2 in total

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