| Literature DB >> 26333812 |
Siobhan S Mc Mahon1, Oleg Lenive1, Sarah Filippi2, Michael P H Stumpf3.
Abstract
Biological organisms rely on their ability to sense and respond appropriately to their environment. The molecular mechanisms that facilitate these essential processes are however subject to a range of random effects and stochastic processes, which jointly affect the reliability of information transmission between receptors and, for example, the physiological downstream response. Information is mathematically defined in terms of the entropy; and the extent of information flowing across an information channel or signalling system is typically measured by the 'mutual information', or the reduction in the uncertainty about the output once the input signal is known. Here, we quantify how extrinsic and intrinsic noise affects the transmission of simple signals along simple motifs of molecular interaction networks. Even for very simple systems, the effects of the different sources of variability alone and in combination can give rise to bewildering complexity. In particular, extrinsic variability is apt to generate 'apparent' information that can, in extreme cases, mask the actual information that for a single system would flow between the different molecular components making up cellular signalling pathways. We show how this artificial inflation in apparent information arises and how the effects of different types of noise alone and in combination can be understood.Entities:
Keywords: extrinsic noise; gene expression; intrinsic noise; mutual information; signal transduction
Mesh:
Year: 2015 PMID: 26333812 PMCID: PMC4614471 DOI: 10.1098/rsif.2015.0597
Source DB: PubMed Journal: J R Soc Interface ISSN: 1742-5662 Impact factor: 4.118