Literature DB >> 26332944

Gene stacking by recombinases.

Vibha Srivastava1, James Thomson2.   

Abstract

Efficient methods of stacking genes into plant genomes are needed to expedite transfer of multigenic traits to crop varieties of diverse ecosystems. Over two decades of research has identified several DNA recombinases that carryout efficient cis and trans recombination between the recombination sites artificially introduced into the plant chromosome. The specificity and efficiency of recombinases make them extremely attractive for genome engineering. In plant biotechnology, recombinases have mostly been used for removing selectable marker genes and have rarely been extended to more complex applications. The reversibility of recombination, a property of the tyrosine family of recombinases, does not lend itself to gene stacking approaches that involve rounds of transformation for integrating genes into the engineered sites. However, recent developments in the field of recombinases have overcome these challenges and paved the way for gene stacking. Some of the key advancements include the application of unidirectional recombination systems, modification of recombination sites and transgene site modifications to allow repeated site-specific integrations into the selected site. Gene stacking is relevant to agriculturally important crops, many of which are difficult to transform; therefore, development of high-efficiency gene stacking systems will be important for its application on agronomically important crops, and their elite varieties. Recombinases, by virtue of their specificity and efficiency in plant cells, emerge as powerful tools for a variety of applications including gene stacking.
© 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Entities:  

Keywords:  FLP-FRT; cre-lox; gene stacking; genome engineering; multigene transformation; site-specific recombination

Mesh:

Substances:

Year:  2015        PMID: 26332944     DOI: 10.1111/pbi.12459

Source DB:  PubMed          Journal:  Plant Biotechnol J        ISSN: 1467-7644            Impact factor:   9.803


  16 in total

1.  Effect of gene order in DNA constructs on gene expression upon integration into plant genome.

Authors:  M Aydın Akbudak; Vibha Srivastava
Journal:  3 Biotech       Date:  2017-05-29       Impact factor: 2.406

Review 2.  Progress of targeted genome modification approaches in higher plants.

Authors:  Teodoro Cardi; C Neal Stewart
Journal:  Plant Cell Rep       Date:  2016-03-29       Impact factor: 4.570

Review 3.  Advancing Crop Transformation in the Era of Genome Editing.

Authors:  Fredy Altpeter; Nathan M Springer; Laura E Bartley; Ann E Blechl; Thomas P Brutnell; Vitaly Citovsky; Liza J Conrad; Stanton B Gelvin; David P Jackson; Albert P Kausch; Peggy G Lemaux; June I Medford; Martha L Orozco-Cárdenas; David M Tricoli; Joyce Van Eck; Daniel F Voytas; Virginia Walbot; Kan Wang; Zhanyuan J Zhang; C Neal Stewart
Journal:  Plant Cell       Date:  2016-06-22       Impact factor: 11.277

4.  Recombinase-mediated integration of a multigene cassette in rice leads to stable expression and inheritance of the stacked locus.

Authors:  Bhuvan Pathak; Vibha Srivastava
Journal:  Plant Direct       Date:  2020-07-06

5.  Generation of a selectable marker free, highly expressed single copy locus as landing pad for transgene stacking in sugarcane.

Authors:  Yang Zhao; Jae Y Kim; Ratna Karan; Je H Jung; Bhuvan Pathak; Bruce Williamson; Baskaran Kannan; Duoduo Wang; Chunyang Fan; Wenjin Yu; Shujie Dong; Vibha Srivastava; Fredy Altpeter
Journal:  Plant Mol Biol       Date:  2019-03-27       Impact factor: 4.076

Review 6.  Sequence modification on demand: search and replace tools for precise gene editing in plants.

Authors:  Tomáš Čermák
Journal:  Transgenic Res       Date:  2021-06-04       Impact factor: 2.788

7.  Multigene Transformation Through Cre-lox Mediated Site-Specific Integration in Rice.

Authors:  Bhuvan Pathak; Soumen Nandy; Vibha Srivastava
Journal:  Methods Mol Biol       Date:  2022

8.  ORBIT: a New Paradigm for Genetic Engineering of Mycobacterial Chromosomes.

Authors:  Kenan C Murphy; Samantha J Nelson; Subhalaxmi Nambi; Kadamba Papavinasasundaram; Christina E Baer; Christopher M Sassetti
Journal:  mBio       Date:  2018-12-11       Impact factor: 7.867

9.  Replacement of stacked transgenes in planta.

Authors:  Weiqiang Chen; Gurminder Kaur; Lili Hou; Ruyu Li; David W Ow
Journal:  Plant Biotechnol J       Date:  2019-06-12       Impact factor: 9.803

10.  High efficiency Agrobacterium-mediated site-specific gene integration in maize utilizing the FLP-FRT recombination system.

Authors:  Ajith Anand; Emily Wu; Zhi Li; Sue TeRonde; Maren Arling; Brian Lenderts; Jasdeep S Mutti; William Gordon-Kamm; Todd J Jones; Nicholas Doane Chilcoat
Journal:  Plant Biotechnol J       Date:  2019-03-28       Impact factor: 9.803

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