Literature DB >> 26331835

Development of a Center for Personalized Cancer Care at a Regional Cancer Center: Feasibility Trial of an Institutional Tumor Sequencing Advisory Board.

Brian R Lane1, Jeffrey Bissonnette2, Tracy Waldherr3, Deborah Ritz-Holland3, Dave Chesla4, Sandra L Cottingham5, Sheryl Alberta2, Cong Liu2, Amanda B Thompson2, Carrie Graveel6, Jeffrey P MacKeigan6, Sabrina L Noyes7, Judy Smith8, Nehal Lakhani9, Matthew R Steensma10.   

Abstract

Next-generation sequencing (NGS) capabilities can affect therapeutic decisions in patients with complex, advanced, or refractory cancer. We report the feasibility of a tumor sequencing advisory board at a regional cancer center. Specimens were analyzed for approximately 2800 mutations in 50 genes. Outcomes of interest included tumor sequencing advisory board function and processes, timely discussion of results, and proportion of reports having potentially actionable mutations. NGS results were successfully generated for 15 patients, with median time from tissue processing to reporting of 11.6 days (range, 5 to 21 days), and presented at a biweekly multidisciplinary tumor sequencing advisory board. Attendance averaged 19 participants (range, 12 to 24) at 20 days after patient enrollment (range, 10 to 30 days). Twenty-seven (range, 1 to 4 per patient) potentially actionable mutations were detected in 11 of 15 patients: TP53 (n = 6), KRAS (n = 4), MET (n = 3), APC (n = 3), CDKN2A (n = 2), PTEN (n = 2), PIK3CA, FLT3, NRAS, VHL, BRAF, SMAD4, and ATM. The Hotspot Panel is now offered as a clinically available test at our institution. NGS results can be obtained by in-house high-throughput sequencing and reviewed in a multidisciplinary tumor sequencing advisory board in a clinically relevant manner. The essential components of a center for personalized cancer care can support clinical decisions outside the university.
Copyright © 2015 American Society for Investigative Pathology and the Association for Molecular Pathology. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26331835     DOI: 10.1016/j.jmoldx.2015.07.003

Source DB:  PubMed          Journal:  J Mol Diagn        ISSN: 1525-1578            Impact factor:   5.568


  7 in total

Review 1.  Immunogenomics: using genomics to personalize cancer immunotherapy.

Authors:  Rance C Siniard; Shuko Harada
Journal:  Virchows Arch       Date:  2017-05-20       Impact factor: 4.064

2.  Experience with precision genomics and tumor board, indicates frequent target identification, but barriers to delivery.

Authors:  Alan H Bryce; Jan B Egan; Mitesh J Borad; A Keith Stewart; Grzegorz S Nowakowski; Asher Chanan-Khan; Mrinal M Patnaik; Stephen M Ansell; Michaela S Banck; Steven I Robinson; Aaron S Mansfield; Eric W Klee; Gavin R Oliver; Jennifer B McCormick; Norine E Huneke; Colleen M Tagtow; Robert B Jenkins; Kandelaria M Rumilla; Sarah E Kerr; Jean-Pierre A Kocher; Scott A Beck; Martin E Fernandez-Zapico; Gianrico Farrugia; Konstantinos N Lazaridis; Robert R McWilliams
Journal:  Oncotarget       Date:  2017-04-18

Review 3.  Implementation and utilization of the molecular tumor board to guide precision medicine.

Authors:  Shuko Harada; Rebecca Arend; Qian Dai; Jessica A Levesque; Thomas S Winokur; Rongjun Guo; Martin J Heslin; Lisle Nabell; L Burt Nabors; Nita A Limdi; Kevin A Roth; Edward E Partridge; Gene P Siegal; Eddy S Yang
Journal:  Oncotarget       Date:  2017-06-14

Review 4.  Next-Generation Sequencing in Oncology: Genetic Diagnosis, Risk Prediction and Cancer Classification.

Authors:  Rick Kamps; Rita D Brandão; Bianca J van den Bosch; Aimee D C Paulussen; Sofia Xanthoulea; Marinus J Blok; Andrea Romano
Journal:  Int J Mol Sci       Date:  2017-01-31       Impact factor: 5.923

5.  Multidisciplinary molecular tumour board: a tool to improve clinical practice and selection accrual for clinical trials in patients with cancer.

Authors:  Christian Rolfo; Paolo Manca; Roberto Salgado; Peter Van Dam; Amelie Dendooven; Jose Ferri Gandia; Annemie Rutten; Willem Lybaert; Joanna Vermeij; Thomas Gevaert; Christine Weyn; Anneke Lefebure; Sofie Metsu; Steven Van Laere; Marc Peeters; Patrick Pauwels; Andreia Machado Coelho
Journal:  ESMO Open       Date:  2018-07-23

Review 6.  Bioinformatics for precision oncology.

Authors:  Jochen Singer; Anja Irmisch; Hans-Joachim Ruscheweyh; Franziska Singer; Nora C Toussaint; Mitchell P Levesque; Daniel J Stekhoven; Niko Beerenwinkel
Journal:  Brief Bioinform       Date:  2019-05-21       Impact factor: 11.622

7.  Use of dedicated gene panel sequencing using next generation sequencing to improve the personalized care of lung cancer.

Authors:  Coureche Guillaume Kaderbhai; Romain Boidot; Françoise Beltjens; Sandy Chevrier; Laurent Arnould; Laure Favier; Aurélie Lagrange; Bruno Coudert; François Ghiringhelli
Journal:  Oncotarget       Date:  2016-04-26
  7 in total

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