Literature DB >> 26327374

An alternative RNA polymerase I structure reveals a dimer hinge.

Dirk Kostrewa1, Claus-D Kuhn2, Christoph Engel3, Patrick Cramer3.   

Abstract

RNA polymerase I (Pol I) is the central, 14-subunit enzyme that synthesizes the ribosomal RNA (rRNA) precursor in eukaryotic cells. The recent crystal structure of Pol I at 2.8 Å resolution revealed two novel elements: the `expander' in the active-centre cleft and the `connector' that mediates Pol I dimerization [Engel et al. (2013), Nature (London), 502, 650-655]. Here, a Pol I structure in an alternative crystal form that was solved by molecular replacement using the original atomic Pol I structure is reported. The resulting alternative structure lacks the expander but still shows an expanded active-centre cleft. The neighbouring Pol I monomers form a homodimer with a relative orientation distinct from that observed previously, establishing the connector as a hinge between Pol I monomers.

Entities:  

Keywords:  RNA polymerase I; connector; dimer; hinge

Mesh:

Substances:

Year:  2015        PMID: 26327374     DOI: 10.1107/S1399004715012651

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  7 in total

1.  Structure of RNA polymerase I transcribing ribosomal DNA genes.

Authors:  Simon Neyer; Michael Kunz; Christian Geiss; Merle Hantsche; Victor-Valentin Hodirnau; Anja Seybert; Christoph Engel; Margot P Scheffer; Patrick Cramer; Achilleas S Frangakis
Journal:  Nature       Date:  2016-11-14       Impact factor: 49.962

Review 2.  Structural Studies of Eukaryotic RNA Polymerase I Using Cryo-Electron Microscopy.

Authors:  Michael Pilsl; Christoph Engel
Journal:  Methods Mol Biol       Date:  2022

Review 3.  Specialization of RNA Polymerase I in Comparison to Other Nuclear RNA Polymerases of Saccharomyces cerevisiae.

Authors:  Philipp E Merkl; Christopher Schächner; Michael Pilsl; Katrin Schwank; Catharina Schmid; Gernot Längst; Philipp Milkereit; Joachim Griesenbeck; Herbert Tschochner
Journal:  Methods Mol Biol       Date:  2022

4.  RNA polymerase I (Pol I) passage through nucleosomes depends on Pol I subunits binding its lobe structure.

Authors:  Philipp E Merkl; Michael Pilsl; Tobias Fremter; Katrin Schwank; Christoph Engel; Gernot Längst; Philipp Milkereit; Joachim Griesenbeck; Herbert Tschochner
Journal:  J Biol Chem       Date:  2020-02-14       Impact factor: 5.157

5.  RNA polymerase I-Rrn3 complex at 4.8 Å resolution.

Authors:  Christoph Engel; Jürgen Plitzko; Patrick Cramer
Journal:  Nat Commun       Date:  2016-07-15       Impact factor: 14.919

6.  Structure of the initiation-competent RNA polymerase I and its implication for transcription.

Authors:  Michael Pilsl; Corinne Crucifix; Gabor Papai; Ferdinand Krupp; Robert Steinbauer; Joachim Griesenbeck; Philipp Milkereit; Herbert Tschochner; Patrick Schultz
Journal:  Nat Commun       Date:  2016-07-15       Impact factor: 14.919

7.  Structure of an inactive RNA polymerase II dimer.

Authors:  Shintaro Aibara; Christian Dienemann; Patrick Cramer
Journal:  Nucleic Acids Res       Date:  2021-10-11       Impact factor: 16.971

  7 in total

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