Literature DB >> 26325302

Convenient analysis of protein modification by chemical blotting with fluorogenic "click" reagents.

Jun Ohata1, Farrukh Vohidov, Zachary T Ball.   

Abstract

Direct visualization of bioorthogonal alkyne or azide handles using fluorogenic azide-alkyne cycloaddition conducted on the surface of a blot membrane. The method eliminates the need for separation steps to remove excess small molecule reagents before attachment of antigen molecules or other visualization handles, and is especially useful for the analysis of peptides and small proteins. A variety of potential fluorogenic reagents are assessed, and sensitivity (<0.1 picomole) similar to current commercially available fluorescence imaging methods is possible.

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Year:  2015        PMID: 26325302      PMCID: PMC4605879          DOI: 10.1039/c5mb00510h

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  14 in total

1.  A fluorogenic probe for the copper(I)-catalyzed azide-alkyne ligation reaction: modulation of the fluorescence emission via 3(n,pi)-1(pi,pi) inversion.

Authors:  Zhen Zhou; Christoph J Fahrni
Journal:  J Am Chem Soc       Date:  2004-07-28       Impact factor: 15.419

Review 2.  Finding the right (bioorthogonal) chemistry.

Authors:  David M Patterson; Lidia A Nazarova; Jennifer A Prescher
Journal:  ACS Chem Biol       Date:  2014-01-30       Impact factor: 5.100

3.  Bioconjugation with strained alkenes and alkynes.

Authors:  Marjoke F Debets; Sander S van Berkel; Jan Dommerholt; A Ton J Dirks; Floris P J T Rutjes; Floris L van Delft
Journal:  Acc Chem Res       Date:  2011-07-18       Impact factor: 22.384

4.  Metabolic cross-talk allows labeling of O-linked beta-N-acetylglucosamine-modified proteins via the N-acetylgalactosamine salvage pathway.

Authors:  Michael Boyce; Isaac S Carrico; Anjali S Ganguli; Seok-Ho Yu; Matthew J Hangauer; Sarah C Hubbard; Jennifer J Kohler; Carolyn R Bertozzi
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-07       Impact factor: 11.205

5.  A fluorogenic probe for the catalyst-free detection of azide-tagged molecules.

Authors:  Frédéric Friscourt; Christoph J Fahrni; Geert-Jan Boons
Journal:  J Am Chem Soc       Date:  2012-11-02       Impact factor: 15.419

6.  Cell-permeable probe for identification and imaging of sialidases.

Authors:  Charng-Sheng Tsai; Hsin-Yung Yen; Meng-I Lin; Tsung-I Tsai; Shi-Yun Wang; Wen-I Huang; Tsui-Ling Hsu; Yih-Shyun E Cheng; Jim-Min Fang; Chi-Huey Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-28       Impact factor: 11.205

7.  Rhodium-catalyzed cysteine modification with diazo reagents.

Authors:  Rituparna Kundu; Zachary T Ball
Journal:  Chem Commun (Camb)       Date:  2012-11-23       Impact factor: 6.222

8.  Redirecting lipoic acid ligase for cell surface protein labeling with small-molecule probes.

Authors:  Marta Fernández-Suárez; Hemanta Baruah; Laura Martínez-Hernández; Kathleen T Xie; Jeremy M Baskin; Carolyn R Bertozzi; Alice Y Ting
Journal:  Nat Biotechnol       Date:  2007-12-02       Impact factor: 54.908

9.  A fluorogenic 1,3-dipolar cycloaddition reaction of 3-azidocoumarins and acetylenes.

Authors:  Krishnamoorthy Sivakumar; Fang Xie; Brandon M Cash; Su Long; Hannah N Barnhill; Qian Wang
Journal:  Org Lett       Date:  2004-11-25       Impact factor: 6.005

10.  Bioorthogonal chemistry: fishing for selectivity in a sea of functionality.

Authors:  Ellen M Sletten; Carolyn R Bertozzi
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

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