Literature DB >> 26325080

Relationship between protein stability and functional activity in the presence of macromolecular crowding agents alone and in mixture: An insight into stability-activity trade-off.

Sumra Shahid1, Faizan Ahmad1, Md Imtaiyaz Hassan1, Asimul Islam2.   

Abstract

The cellular environment is crowded with different kinds of molecules with varying sizes, shapes and compositions. Most of the experiments studying the nature and behaviour of a protein have been done on the isolated protein in dilute buffer solutions which actually do not imitate the in vivo situation. To understand the consequences of such crowded environment, we investigated the effect of macromolecular crowding on the stability and activity of hen egg white lysozyme. Two crowding agents, dextran 70 and ficoll 70 which have different shapes and composition, have been employed in this study. To mimic the cellular condition from physiological point of view, the effect of mixtures of both the crowding agents has been also studied. The results indicate that owing to volume exclusion, lysozyme is stabilized while its activity decays with the increasing concentration of both the crowders elucidating the hypothesis of stability-activity trade-off. Mixed macromolecular crowding exerts greater effect than the sum of constituent crowding agents (dextran 70 and ficoll 70).
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Crowding agent; Enzyme activity; Excluded volume effect; Macromolecular crowding; Stability-activity trade-off; Thermal stability

Mesh:

Substances:

Year:  2015        PMID: 26325080     DOI: 10.1016/j.abb.2015.08.015

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  10 in total

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Authors:  Luis C Acosta; Gerardo M Perez Goncalves; Gary J Pielak; Annelise H Gorensek-Benitez
Journal:  Protein Sci       Date:  2017-11-17       Impact factor: 6.725

2.  Size-Dependent Interplay of Volume Exclusion Versus Soft Interactions: Cytochrome c in Macromolecular Crowded Environment.

Authors:  Zahoor Ahmad Parray; Faizan Ahmad; Anis Ahmad Chaudhary; Hassan Ahmad Rudayni; Mohammed Al-Zharani; Md Imtaiyaz Hassan; Asimul Islam
Journal:  Front Mol Biosci       Date:  2022-05-25

3.  Cleavage-Resistant Protein Labeling With Hydrophilic Trityl Enables Distance Measurements In-Cell.

Authors:  Zikri Hasanbasri; Kevin Singewald; Teresa D Gluth; Benoit Driesschaert; Sunil Saxena
Journal:  J Phys Chem B       Date:  2021-05-13       Impact factor: 3.466

4.  Microscale Measurements of Michaelis-Menten Constants of Neuraminidase with Nanogel Capillary Electrophoresis for the Determination of the Sialic Acid Linkage.

Authors:  Srikanth Gattu; Cassandra L Crihfield; Lisa A Holland
Journal:  Anal Chem       Date:  2016-12-21       Impact factor: 6.986

5.  Mixed Macromolecular Crowding: A Protein and Solvent Perspective.

Authors:  Saikat Biswas; Jayanta Kundu; Sanjib K Mukherjee; Pramit Kumar Chowdhury
Journal:  ACS Omega       Date:  2018-04-19

6.  Chaperone-Like Activity of HSPB5: The Effects of Quaternary Structure Dynamics and Crowding.

Authors:  Natalia A Chebotareva; Svetlana G Roman; Vera A Borzova; Tatiana B Eronina; Valeriya V Mikhaylova; Boris I Kurganov
Journal:  Int J Mol Sci       Date:  2020-07-13       Impact factor: 5.923

7.  Macromolecular crowding effects on the kinetics of opposing reactions catalyzed by alcohol dehydrogenase.

Authors:  Xander E Wilcox; Charmaine B Chung; Kristin M Slade
Journal:  Biochem Biophys Rep       Date:  2021-02-20

8.  Structural Refolding and Thermal Stability of Myoglobin in the Presence of Mixture of Crowders: Importance of Various Interactions for Protein Stabilization in Crowded Conditions.

Authors:  Zahoor Ahmad Parray; Faizan Ahmad; Md Imtaiyaz Hassan; Anwar Ahmed; Fahad N Almajhdi; Ajamaluddin Malik; Tajamul Hussain; Asimul Islam
Journal:  Molecules       Date:  2021-05-10       Impact factor: 4.411

9.  Carbohydrate-Based Macromolecular Crowding-Induced Stabilization of Proteins: Towards Understanding the Significance of the Size of the Crowder.

Authors:  Sumra Shahid; Ikramul Hasan; Faizan Ahmad; Md Imtaiyaz Hassan; Asimul Islam
Journal:  Biomolecules       Date:  2019-09-12

10.  Combined Effects of Confinement and Macromolecular Crowding on Protein Stability.

Authors:  Murial L Ross; Jeffrey Kunkel; Steven Long; Prashanth Asuri
Journal:  Int J Mol Sci       Date:  2020-11-12       Impact factor: 5.923

  10 in total

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