| Literature DB >> 26324104 |
N Sadeh1,2, J M Spielberg2,3, M W Logue4,5,6, E J Wolf1,2, A K Smith7, J Lusk1, J P Hayes1,2,3, E Sperbeck1, W P Milberg8,9, R E McGlinchey8,9, D H Salat3,10, W C Carter11, A Stone11, S A Schichman11, D E Humphries12, M W Miller1,2.
Abstract
Methylation of the SKA2 (spindle and kinetochore-associated complex subunit 2) gene has recently been identified as a promising biomarker of suicide risk. Based on this finding, we examined associations between SKA2 methylation, cortical thickness and psychiatric phenotypes linked to suicide in trauma-exposed veterans. About 200 trauma-exposed white non-Hispanic veterans of the recent conflicts in Iraq and Afghanistan (91% male) underwent clinical assessment and had blood drawn for genotyping and methylation analysis. Of all, 145 participants also had neuroimaging data available. Based on previous research, we examined DNA methylation at the cytosine-guanine locus cg13989295 as well as DNA methylation adjusted for genotype at the methylation-associated single nucleotide polymorphism (rs7208505) in relationship to whole-brain cortical thickness, posttraumatic stress disorder symptoms (PTSD) and depression symptoms. Whole-brain vertex-wise analyses identified three clusters in prefrontal cortex that were associated with genotype-adjusted SKA2 DNA methylation (methylation(adj)). Specifically, DNA methylation(adj) was associated with bilateral reductions of cortical thickness in frontal pole and superior frontal gyrus, and similar effects were found in the right orbitofrontal cortex and right inferior frontal gyrus. PTSD symptom severity was positively correlated with SKA2 DNA methylation(adj) and negatively correlated with cortical thickness in these regions. Mediation analyses showed a significant indirect effect of PTSD on cortical thickness via SKA2 methylation status. Results suggest that DNA methylation(adj) of SKA2 in blood indexes stress-related psychiatric phenotypes and neurobiology, pointing to its potential value as a biomarker of stress exposure and susceptibility.Entities:
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Year: 2015 PMID: 26324104 PMCID: PMC4760869 DOI: 10.1038/mp.2015.134
Source DB: PubMed Journal: Mol Psychiatry ISSN: 1359-4184 Impact factor: 15.992
Characteristics of OEF/OIF/OND Trauma-Exposed Veteran Study Sample
| Mean (SD) | N (%) | |
|---|---|---|
| Age (Years) | 31.8 (8.4) | |
| Sex (Male) | - | 182 (91%) |
| Military Deployment Duration (Months) | 12.9 (8.7) | - |
| Psychiatric Medication Use | ||
| No | 108 (54%) | |
| Yes | 88 (44%) | |
| Current PTSD | - | |
| No | 83 (41%) | |
| Yes | 116 (58%) | |
| Current MDD | - | |
| No | 150 (75%) | |
| Yes | 49 (25%) | |
| Current SUD | - | |
| No | 171 (86%) | |
| Yes | 28 (14%) | |
Note. PTSD = posttraumatic stress disorder. MDD = major depressive disorder. SUD = substance use disorder.
four missing cases.
one missing case.
Reductions in Cortical Thickness in Frontal Cortex Associated with SKA2 3′ UTR DNA Methylation Adjusting for Genotype
| Peak F-Value | Peak (x,y,z) | No. of Vertices | Cluster Size (mm2) | |
|---|---|---|---|---|
| L Frontal Pole/SFG/Rostral MFG | −2.87 | −8, 61, 12 | 121563 | 1832 |
| R Frontal Pole/SFG | −3.49 | 7, 55, 25 | 64286 | 1347 |
| R OFC/IFG Pars Orbitalis/Rostral MFG | −3.17 | 27, 49, −12 | 64226 | 1411 |
Note: N = 145. SFG = superior frontal gyrus. MFG = middle frontal gyrus. OFC = orbitofrontal cortex. IFG = inferior frontal gyrus. All clusters survived Monte Carlo Simulation correction for multiple comparisons. R = right hemisphere. L = left hemisphere.
Figure 1SKA2 Methylation Adjusting for Genotype Relates to Reduced Cortical Thickness in Frontal Cortex
(A) Frontal pole, superior frontal gyrus, and rostral middle frontal gyrus. (B) Frontal pole and superior frontal gyrus. (C) Orbitofrontal cortex, inferior frontal gyrus, and rostral middle frontal gyrus.
Hierarchical Linear Regression Analysis of Genetic and Epigenetic Variation at SKA2 and Current PTSD Symptom Severity
| Model 1 | Model 2 | Model 3 | |
|---|---|---|---|
|
| |||
| Step 1 | |||
| Age | −.10 (0.3) | −.10 (0.3) | −.10 (0.3) |
| Sex | .04 (7.3) | .04 (7.3) | .04 (7.3) |
| Ancestry PC1 | .02 (29.9) | .02 (29.9) | .02 (29.9) |
| Ancestry PC2 | .08 (30.1) | .08 (30.1) | .08 (30.1) |
| Ancestry PC3 | −.16 (30.1) | −.16 (30.1) | −.16 (30.1) |
| Step 2 | |||
| rs7208505 Genotype | −.16 (2.9) | -------- | −.16 (2.9) |
| cg13989295 Methylation | -------- | −.07 (0.4) | -------- |
| Step 3 | |||
| cg13989295 Methylation (methylationadj) | -------- | -------- | .37 (0.9) |
Note. N = 199. PC = principal component.
Model 1. Step1: R= .043, Step2: Δ R= .024*.
Model 2. Step1: R= .043, Step2: Δ R= .01.
Model 3. Step1: R= .043, Step2: Δ R= .024*, Step3: Δ R= .026*.
p <.05.