Literature DB >> 26322736

Programmable genetic circuits for pathway engineering.

Allison Hoynes-O'Connor1, Tae Seok Moon2.   

Abstract

Synthetic biology has the potential to provide decisive advances in genetic control of metabolic pathways. However, there are several challenges that synthetic biologists must overcome before this vision becomes a reality. First, a library of diverse and well-characterized sensors, such as metabolite-sensing or condition-sensing promoters, must be constructed. Second, robust programmable circuits that link input conditions with a specific gene regulation response must be developed. Finally, multi-gene targeting strategies must be integrated with metabolically relevant sensors and complex, robust logic. Achievements in each of these areas, which employ the CRISPR/Cas system, in silico modeling, and dynamic sensor-regulators, among other tools, provide a strong basis for future research. Overall, the future for synthetic biology approaches in metabolic engineering holds immense promise.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2015        PMID: 26322736     DOI: 10.1016/j.copbio.2015.08.007

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  9 in total

1.  A tightly regulated and adjustable CRISPR-dCas9 based AND gate in yeast.

Authors:  Anja Hofmann; Johannes Falk; Tim Prangemeier; Dominic Happel; Adrian Köber; Andreas Christmann; Heinz Koeppl; Harald Kolmar
Journal:  Nucleic Acids Res       Date:  2019-01-10       Impact factor: 16.971

Review 2.  Rational engineering of synthetic microbial systems: from single cells to consortia.

Authors:  Philip Bittihn; M Omar Din; Lev S Tsimring; Jeff Hasty
Journal:  Curr Opin Microbiol       Date:  2018-03-22       Impact factor: 7.934

3.  Design of a programmable biosensor-CRISPRi genetic circuits for dynamic and autonomous dual-control of metabolic flux in Bacillus subtilis.

Authors:  Yaokang Wu; Taichi Chen; Yanfeng Liu; Rongzhen Tian; Xueqin Lv; Jianghua Li; Guocheng Du; Jian Chen; Rodrigo Ledesma-Amaro; Long Liu
Journal:  Nucleic Acids Res       Date:  2020-01-24       Impact factor: 16.971

4.  Synthetic Whole-Cell Biodevices for Targeted Degradation of Antibiotics.

Authors:  Peng-Fei Xia; Qian Li; Lin-Rui Tan; Miao-Miao Liu; Yong-Su Jin; Shu-Guang Wang
Journal:  Sci Rep       Date:  2018-02-13       Impact factor: 4.379

5.  Reprogramming microbial populations using a programmed lysis system to improve chemical production.

Authors:  Wenwen Diao; Liang Guo; Qiang Ding; Cong Gao; Guipeng Hu; Xiulai Chen; Yang Li; Linpei Zhang; Wei Chen; Jian Chen; Liming Liu
Journal:  Nat Commun       Date:  2021-11-25       Impact factor: 14.919

6.  Programmable control of bacterial gene expression with the combined CRISPR and antisense RNA system.

Authors:  Young Je Lee; Allison Hoynes-O'Connor; Matthew C Leong; Tae Seok Moon
Journal:  Nucleic Acids Res       Date:  2016-02-02       Impact factor: 16.971

7.  Editorial: Secondary Metabolism. An Unlimited Foundation for Synthetic Biology.

Authors:  Ana Lúcia Leitão; Francisco J Enguita
Journal:  Front Microbiol       Date:  2016-01-11       Impact factor: 5.640

8.  Dual control system - A novel scaffolding architecture of an inducible regulatory device for the precise regulation of gene expression.

Authors:  L Horbal; A Luzhetskyy
Journal:  Metab Eng       Date:  2016-03-31       Impact factor: 9.783

9.  Dynamic control of endogenous metabolism with combinatorial logic circuits.

Authors:  Felix Moser; Amin Espah Borujeni; Amar N Ghodasara; Ewen Cameron; Yongjin Park; Christopher A Voigt
Journal:  Mol Syst Biol       Date:  2018-11-27       Impact factor: 11.429

  9 in total

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