Literature DB >> 26317236

Mapping proteins with spatial proteomics.

Vivien Marx1.   

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Year:  2015        PMID: 26317236     DOI: 10.1038/nmeth.3555

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


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  8 in total

1.  Proteomics characterization of abundant Golgi membrane proteins.

Authors:  A W Bell; M A Ward; W P Blackstock; H N Freeman; J S Choudhary; A P Lewis; D Chotai; A Fazel; J N Gushue; J Paiement; S Palcy; E Chevet; M Lafrenière-Roula; R Solari; D Y Thomas; A Rowley; J J Bergeron
Journal:  J Biol Chem       Date:  2000-10-19       Impact factor: 5.157

Review 2.  Creation of an antibody-based subcellular protein atlas.

Authors:  Emma Lundberg; Mathias Uhlén
Journal:  Proteomics       Date:  2010-11       Impact factor: 3.984

3.  Quantitative and dynamic assessment of the contribution of the ER to phagosome formation.

Authors:  Nicolas Touret; Paul Paroutis; Mauricio Terebiznik; Rene E Harrison; Sergio Trombetta; Marc Pypaert; Amy Chow; Aimin Jiang; James Shaw; Christopher Yip; Hsiao-Ping Moore; Nicole van der Wel; Diane Houben; Peter J Peters; Chantal de Chastellier; Ira Mellman; Sergio Grinstein
Journal:  Cell       Date:  2005-10-07       Impact factor: 41.582

4.  Quantitative proteomics analysis of the secretory pathway.

Authors:  Annalyn Gilchrist; Catherine E Au; Johan Hiding; Alexander W Bell; Julia Fernandez-Rodriguez; Souad Lesimple; Hisao Nagaya; Line Roy; Sara J C Gosline; Michael Hallett; Jacques Paiement; Robert E Kearney; Tommy Nilsson; John J M Bergeron
Journal:  Cell       Date:  2006-12-15       Impact factor: 41.582

5.  Proteomic mapping of mitochondria in living cells via spatially restricted enzymatic tagging.

Authors:  Hyun-Woo Rhee; Peng Zou; Namrata D Udeshi; Jeffrey D Martell; Vamsi K Mootha; Steven A Carr; Alice Y Ting
Journal:  Science       Date:  2013-01-31       Impact factor: 47.728

6.  A mitochondrial protein compendium elucidates complex I disease biology.

Authors:  David J Pagliarini; Sarah E Calvo; Betty Chang; Sunil A Sheth; Scott B Vafai; Shao-En Ong; Geoffrey A Walford; Canny Sugiana; Avihu Boneh; William K Chen; David E Hill; Marc Vidal; James G Evans; David R Thorburn; Steven A Carr; Vamsi K Mootha
Journal:  Cell       Date:  2008-07-11       Impact factor: 41.582

7.  A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells.

Authors:  Kyle J Roux; Dae In Kim; Manfred Raida; Brian Burke
Journal:  J Cell Biol       Date:  2012-03-12       Impact factor: 10.539

8.  Directed evolution of APEX2 for electron microscopy and proximity labeling.

Authors:  Stephanie S Lam; Jeffrey D Martell; Kimberli J Kamer; Thomas J Deerinck; Mark H Ellisman; Vamsi K Mootha; Alice Y Ting
Journal:  Nat Methods       Date:  2014-11-24       Impact factor: 28.547

  8 in total
  11 in total

1.  Global, quantitative and dynamic mapping of protein subcellular localization.

Authors:  Daniel N Itzhak; Stefka Tyanova; Jürgen Cox; Georg Hh Borner
Journal:  Elife       Date:  2016-06-09       Impact factor: 8.140

2.  Advanced Multidimensional Separations in Mass Spectrometry: Navigating the Big Data Deluge.

Authors:  Jody C May; John A McLean
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2016-03-30       Impact factor: 10.745

3.  An Approach to Spatiotemporally Resolve Protein Interaction Networks in Living Cells.

Authors:  Braden T Lobingier; Ruth Hüttenhain; Kelsie Eichel; Kenneth B Miller; Alice Y Ting; Mark von Zastrow; Nevan J Krogan
Journal:  Cell       Date:  2017-04-06       Impact factor: 41.582

4.  Meloidogyne incognita PASSE-MURAILLE (MiPM) Gene Encodes a Cell-Penetrating Protein That Interacts With the CSN5 Subunit of the COP9 Signalosome.

Authors:  Caroline Bournaud; François-Xavier Gillet; André M Murad; Emmanuel Bresso; Erika V S Albuquerque; Maria F Grossi-de-Sá
Journal:  Front Plant Sci       Date:  2018-06-26       Impact factor: 5.753

5.  Nanoscopic subcellular imaging enabled by ion beam tomography.

Authors:  Ahmet F Coskun; Guojun Han; Shambavi Ganesh; Shih-Yu Chen; Xavier Rovira Clavé; Stefan Harmsen; Sizun Jiang; Christian M Schürch; Yunhao Bai; Chuck Hitzman; Garry P Nolan
Journal:  Nat Commun       Date:  2021-02-04       Impact factor: 14.919

Review 6.  Emerging Technologies for Tissue Engineering: From Gene Editing to Personalized Medicine.

Authors:  James P K Armstrong; Molly M Stevens
Journal:  Tissue Eng Part A       Date:  2019-05       Impact factor: 3.845

Review 7.  Transcriptomics resources of human tissues and organs.

Authors:  Mathias Uhlén; Björn M Hallström; Cecilia Lindskog; Adil Mardinoglu; Fredrik Pontén; Jens Nielsen
Journal:  Mol Syst Biol       Date:  2016-04-04       Impact factor: 11.429

8.  Proximity-Directed Labeling Reveals a New Rapamycin-Induced Heterodimer of FKBP25 and FRB in Live Cells.

Authors:  Song-Yi Lee; Hakbong Lee; Hye-Kyeong Lee; Seung-Won Lee; Sung Chul Ha; Taejoon Kwon; Jeong Kon Seo; Changwook Lee; Hyun-Woo Rhee
Journal:  ACS Cent Sci       Date:  2016-08-12       Impact factor: 14.553

Review 9.  Biomarkers: paving stones on the road towards the personalized precision medicine for oral squamous cell carcinoma.

Authors:  Liang Zhong; Yutong Liu; Kai Wang; Zhijing He; Zhaojian Gong; Zhili Zhao; Yaocheng Yang; Xiaofei Gao; Fangjie Li; Hanjiang Wu; Sheng Zhang; Lin Chen
Journal:  BMC Cancer       Date:  2018-09-21       Impact factor: 4.430

10.  Nondestructive analysis of tumor-associated membrane protein MUC1 in living cells based on dual-terminal amplification of a DNA ternary complex.

Authors:  Xiaohao Liu; Dongsheng Mao; Guoli Deng; Yuchen Song; Fan Zhang; Shiqi Yang; Genxi Li; Feng Liu; Wei Cao; Xiaoli Zhu
Journal:  Theranostics       Date:  2020-03-15       Impact factor: 11.556

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